Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_B01
         (826 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0152 - 1168928-1169377                                          193   1e-49
11_01_0155 - 1287003-1287452                                          193   1e-49
07_03_1553 - 27653473-27653490,27653634-27653673,27653852-276539...    38   0.007
03_06_0097 - 31632238-31632525,31633386-31633769                       38   0.007
01_05_0500 + 22752190-22752329,22752957-22753032,22753292-227533...    29   5.9  
02_05_1340 + 35797923-35799881                                         28   7.8  

>12_01_0152 - 1168928-1169377
          Length = 149

 Score =  193 bits (471), Expect = 1e-49
 Identities = 85/131 (64%), Positives = 108/131 (82%)
 Frame = +2

Query: 95  REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKF 274
           R P   VQ FGRKKTA AV+YCK G G+++VNG P++L+ P +L+ K  EPILL G+ +F
Sbjct: 7   RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRF 66

Query: 275 SMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 454
             +D+R+ V+GGG  +Q+YAIRQAI+KAL+A+YQKYVDEASKKE+KDI  +YDR+LLVAD
Sbjct: 67  KDIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVAD 126

Query: 455 PRRCEPKKFGG 487
           PRRCEPKKFGG
Sbjct: 127 PRRCEPKKFGG 137


>11_01_0155 - 1287003-1287452
          Length = 149

 Score =  193 bits (471), Expect = 1e-49
 Identities = 85/131 (64%), Positives = 108/131 (82%)
 Frame = +2

Query: 95  REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKF 274
           R P   VQ FGRKKTA AV+YCK G G+++VNG P++L+ P +L+ K  EPILL G+ +F
Sbjct: 7   RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRF 66

Query: 275 SMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 454
             +D+R+ V+GGG  +Q+YAIRQAI+KAL+A+YQKYVDEASKKE+KDI  +YDR+LLVAD
Sbjct: 67  KDIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVAD 126

Query: 455 PRRCEPKKFGG 487
           PRRCEPKKFGG
Sbjct: 127 PRRCEPKKFGG 137


>07_03_1553 -
           27653473-27653490,27653634-27653673,27653852-27653939,
           27654150-27654230,27654644-27655084,27655692-27656325
          Length = 433

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 26/79 (32%), Positives = 38/79 (48%)
 Frame = +2

Query: 125 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 304
           G++K + A  + + G G   VN +  D   P +L ++          +     D+  TVK
Sbjct: 295 GKRKCSIARVWIQPGDGKFIVNDKQFDSYFP-ILDHRADLLRPFTVTKTLGRWDVTCTVK 353

Query: 305 GGGHVAQVYAIRQAISKAL 361
           GGG   QV AIR  IS+AL
Sbjct: 354 GGGVSGQVGAIRLGISRAL 372


>03_06_0097 - 31632238-31632525,31633386-31633769
          Length = 223

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 3/129 (2%)
 Frame = +2

Query: 107 QAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLV---EPRLLQYKLQEPILLLGKEKFS 277
           Q +   GR+KTA A    + G G + +N R         P  ++Y  + P++ LG E  +
Sbjct: 96  QRITATGRRKTAIARVVLQEGTGRVFINFRDAKEYLQGNPMWMEY-CKVPLVTLGFE--N 152

Query: 278 MVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADP 457
             D+ V V GGG   Q  AI   +++AL+      +  A+K  ++         LL  D 
Sbjct: 153 SYDVFVKVHGGGLSGQAQAICLGVARALVK-----ISTANKVTLR------GEGLLTRDT 201

Query: 458 RRCEPKKFG 484
           R  E KK G
Sbjct: 202 RIVERKKAG 210


>01_05_0500 +
           22752190-22752329,22752957-22753032,22753292-22753351,
           22754718-22754882,22756299-22756358
          Length = 166

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 199 WTAVYTQHSMTTLAIRNCGGGFLTSEYLD 113
           W  V T H +T +A R+C G F   ++LD
Sbjct: 18  WNYVVTAHKLTVVA-RSCVGNFTAPDHLD 45


>02_05_1340 + 35797923-35799881
          Length = 652

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 272 IFPCRAKGLALEVCTAAVW 216
           IFP R +GL + +C+ A W
Sbjct: 560 IFPTRVRGLCIAICSLAFW 578


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,073,647
Number of Sequences: 37544
Number of extensions: 383652
Number of successful extensions: 1153
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)