Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_B01
(826 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 236 8e-62
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 236 8e-62
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 236 8e-62
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 236 8e-62
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 136 7e-32
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 110 5e-24
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 48 4e-05
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 48 4e-05
Y08982-1|CAA70171.1| 1530|Homo sapiens synaptonemal complex late... 31 5.1
BC146798-1|AAI46799.1| 792|Homo sapiens Unknown (protein for IM... 31 5.1
BC132870-1|AAI32871.1| 1530|Homo sapiens synaptonemal complex pr... 31 5.1
BC132864-1|AAI32865.1| 1530|Homo sapiens synaptonemal complex pr... 31 5.1
BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein ... 31 5.1
BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein ... 31 5.1
BC040566-1|AAH40566.1| 1024|Homo sapiens SYCP2 protein protein. 31 5.1
AL158092-3|CAM28338.1| 1023|Homo sapiens synaptonemal complex pr... 31 5.1
AL158092-2|CAC36022.2| 1530|Homo sapiens synaptonemal complex pr... 31 5.1
AL109928-10|CAM28269.1| 1023|Homo sapiens synaptonemal complex p... 31 5.1
AL109928-9|CAI21795.1| 1530|Homo sapiens synaptonemal complex pr... 31 5.1
AL080226-1|CAB45780.1| 520|Homo sapiens hypothetical protein pr... 31 5.1
BC009071-1|AAH09071.1| 246|Homo sapiens protein F25965 protein. 31 6.7
AL122010-1|CAI23556.1| 979|Homo sapiens discs, large (Drosophil... 31 6.7
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 236 bits (577), Expect = 8e-62
Identities = 106/130 (81%), Positives = 125/130 (96%)
Frame = +2
Query: 101 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 280
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 281 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPR 460
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 461 RCEPKKFGGP 490
RCE KKFGGP
Sbjct: 126 RCESKKFGGP 135
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 236 bits (577), Expect = 8e-62
Identities = 106/130 (81%), Positives = 125/130 (96%)
Frame = +2
Query: 101 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 280
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 281 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPR 460
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 461 RCEPKKFGGP 490
RCE KKFGGP
Sbjct: 126 RCESKKFGGP 135
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 236 bits (577), Expect = 8e-62
Identities = 106/130 (81%), Positives = 125/130 (96%)
Frame = +2
Query: 101 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 280
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 281 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPR 460
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 461 RCEPKKFGGP 490
RCE KKFGGP
Sbjct: 126 RCESKKFGGP 135
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 236 bits (577), Expect = 8e-62
Identities = 106/130 (81%), Positives = 125/130 (96%)
Frame = +2
Query: 101 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 280
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 281 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPR 460
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 461 RCEPKKFGGP 490
RCE KKFGGP
Sbjct: 126 RCESKKFGGP 135
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 136 bits (330), Expect = 7e-32
Identities = 60/83 (72%), Positives = 75/83 (90%)
Frame = +2
Query: 101 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 280
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 281 VDIRVTVKGGGHVAQVYAIRQAI 349
VDIRV VKGGGHVAQ+Y Q +
Sbjct: 66 VDIRVRVKGGGHVAQIYGESQEL 88
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 366 PSTRNM*TKPQRRKSKTS*FNTIGVCW 446
P TRNM + RR+SKTS + G CW
Sbjct: 126 PITRNMWMRLPRRRSKTSSSSMTGPCW 152
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 110 bits (265), Expect = 5e-24
Identities = 57/108 (52%), Positives = 75/108 (69%)
Frame = +2
Query: 104 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 283
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 284 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQ 427
DI V VKG GHV Q+YA+ Q ISKAL+ Y KYVDEAS +EIKD L +
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEAS-EEIKDTLTR 124
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 48.0 bits (109), Expect = 4e-05
Identities = 43/121 (35%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Frame = +2
Query: 125 GRKKTATAVAYC-KRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 301
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 302 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 481
GGG AQ AIR A++KAL +F + DE LL DPR E KK
Sbjct: 333 SGGGRSAQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRVRERKKP 382
Query: 482 G 484
G
Sbjct: 383 G 383
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 48.0 bits (109), Expect = 4e-05
Identities = 43/121 (35%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Frame = +2
Query: 125 GRKKTATAVAYC-KRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 301
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 180 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 238
Query: 302 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 481
GGG AQ AIR A++KAL +F + DE LL DPR E KK
Sbjct: 239 SGGGRSAQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRVRERKKP 288
Query: 482 G 484
G
Sbjct: 289 G 289
>Y08982-1|CAA70171.1| 1530|Homo sapiens synaptonemal complex lateral
element protein protein.
Length = 1530
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 323 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 454
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC146798-1|AAI46799.1| 792|Homo sapiens Unknown (protein for
IMAGE:8860302) protein.
Length = 792
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 323 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 454
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 338 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 381
>BC132870-1|AAI32871.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 323 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 454
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC132864-1|AAI32865.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 323 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 454
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 31.1 bits (67), Expect = 5.1
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 212 EPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 388
+P L K EP L +KF +D+R + + H+ V+ + I + L +YQ +VD
Sbjct: 42 KPPFLLEKSMEPSLKYINKKFPNIDVRNSTQ---HLGPVHREKAEIIRFLTNYYQSFVD 97
>BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 31.1 bits (67), Expect = 5.1
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 212 EPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 388
+P L K EP L +KF +D+R + + H+ V+ + I + L +YQ +VD
Sbjct: 42 KPPFLLEKSMEPSLKYINKKFPNIDVRNSTQ---HLGPVHREKAEIIRFLTNYYQSFVD 97
>BC040566-1|AAH40566.1| 1024|Homo sapiens SYCP2 protein protein.
Length = 1024
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 323 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 454
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL158092-3|CAM28338.1| 1023|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1023
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 323 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 454
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL158092-2|CAC36022.2| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 323 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 454
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL109928-10|CAM28269.1| 1023|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1023
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 323 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 454
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL109928-9|CAI21795.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 323 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 454
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL080226-1|CAB45780.1| 520|Homo sapiens hypothetical protein
protein.
Length = 520
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 323 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 454
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 61 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 104
>BC009071-1|AAH09071.1| 246|Homo sapiens protein F25965 protein.
Length = 246
Score = 30.7 bits (66), Expect = 6.7
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -1
Query: 109 LDGLTSCLLHSSHFDRERLIE 47
LD + CLL SH DRERL E
Sbjct: 22 LDAVLQCLLEKSHMDRERLDE 42
>AL122010-1|CAI23556.1| 979|Homo sapiens discs, large (Drosophila)
homolog-associated protein 3 protein.
Length = 979
Score = 30.7 bits (66), Expect = 6.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 280 GRHQSDSQGWWSCSTSLRYPTSYFKG 357
GRHQ+ S GWWS +L + + G
Sbjct: 251 GRHQAKSTGWWSSDDNLDSDSGFLAG 276
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,682,866
Number of Sequences: 237096
Number of extensions: 2085917
Number of successful extensions: 4910
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4908
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -