Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_A22
         (1274 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               25   1.9  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    24   3.3  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    24   3.3  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 393 QGQRGTWP*XPKTIGKRPLTEKNFSIGIGIGYQ 491
           Q   G+W    K IG + L +  F  G G+G Q
Sbjct: 148 QSGMGSWEVYTKGIGAKLLLQMGFEPGKGLGKQ 180


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 287 NGLNEGIQTLIERPGGXLTKRFGPQGNF 370
           NG  +G   +   PGG L+  FG  G F
Sbjct: 100 NGFIKGQSEVQRGPGGRLSPYFGINGGF 127


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +2

Query: 242 KRQKERIFWSPFF 280
           KRQKE+I W P F
Sbjct: 678 KRQKEKIEWDPGF 690


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 319,857
Number of Sequences: 438
Number of extensions: 7389
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 43702932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)