Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_A15
         (858 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          35   8e-04
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      35   8e-04
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          35   0.001
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      35   0.001
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          33   0.003
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      33   0.003

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 35.1 bits (77), Expect = 8e-04
 Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = +3

Query: 153 DAAFVEKQKKILSLFYNVNEINY-EAEYYKVAQDFNIEASKDCY 281
           D  F+ KQKKI  L   V + +  +AE+Y V +++++E++ D Y
Sbjct: 29  DMDFLHKQKKIFDLLLYVRQADLSDAEWYDVGRNYDMESNMDMY 72


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 35.1 bits (77), Expect = 8e-04
 Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = +3

Query: 153 DAAFVEKQKKILSLFYNVNEINY-EAEYYKVAQDFNIEASKDCY 281
           D  F+ KQKKI  L   V + +  +AE+Y V +++++E++ D Y
Sbjct: 29  DMDFLHKQKKIFDLLLYVRQADLSDAEWYDVGRNYDMESNMDMY 72


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 34.7 bits (76), Expect = 0.001
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +3

Query: 135 FKTTPVDAAFVEKQKKILSLFYNVNEINY-EAEYYKVAQDFNIEASKDCYT 284
           + T   D  F+ KQKK+ +L Y V +       +Y   Q +NIEA+ D YT
Sbjct: 24  YDTKTADKDFLLKQKKVYNLLYRVAQPALANITWYNEGQAWNIEANIDSYT 74



 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +2

Query: 806 ALFKLFYYAQRF 841
           ALFKLFY+A+ F
Sbjct: 110 ALFKLFYHAKDF 121


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 34.7 bits (76), Expect = 0.001
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +3

Query: 135 FKTTPVDAAFVEKQKKILSLFYNVNEINY-EAEYYKVAQDFNIEASKDCYT 284
           + T   D  F+ KQKK+ +L Y V +       +Y   Q +NIEA+ D YT
Sbjct: 24  YDTKTADKDFLLKQKKVYNLLYRVAQPALANITWYNEGQAWNIEANIDSYT 74



 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +2

Query: 806 ALFKLFYYAQRF 841
           ALFKLFY+A+ F
Sbjct: 110 ALFKLFYHAKDF 121


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 33.1 bits (72), Expect = 0.003
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +3

Query: 153 DAAFVEKQKKILSLFYNVNEIN-YEAEYYKVAQDFNIEASKDCY 281
           D  +V +QK I  LF++V++   Y  E Y+ A+ FN+  + D Y
Sbjct: 28  DKTYVTRQKNIYELFWHVDQPTVYHPELYQKARTFNLVENLDNY 71


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 33.1 bits (72), Expect = 0.003
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +3

Query: 153 DAAFVEKQKKILSLFYNVNEIN-YEAEYYKVAQDFNIEASKDCY 281
           D  +V +QK I  LF++V++   Y  E Y+ A+ FN+  + D Y
Sbjct: 28  DKTYVTRQKNIYELFWHVDQPTVYHPELYQKARTFNLVENLDNY 71


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,969
Number of Sequences: 438
Number of extensions: 3470
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)