Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_A14
(866 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 296 2e-80
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 293 9e-80
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 293 2e-79
09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078 31 1.2
05_01_0154 + 1020650-1022050,1022304-1022373,1022496-1022617,102... 29 3.6
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 29 4.8
12_02_0513 - 19906147-19906271,19906470-19906791,19907091-199076... 29 6.4
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 29 6.4
06_03_0256 - 18841627-18841993,18842087-18842415,18842512-188427... 29 6.4
02_05_0227 - 26994462-26994591,26994714-26994803,26994895-269950... 29 6.4
04_04_1540 - 34245246-34245797,34246904-34247157,34247989-34248577 28 8.4
02_01_0285 - 1913425-1914065,1914094-1914177,1914249-1915140,191... 28 8.4
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 296 bits (726), Expect = 2e-80
Identities = 136/205 (66%), Positives = 162/205 (79%)
Frame = +3
Query: 33 FLKICSI*YLSNMARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFL 212
F+K + S ARG KKHLKRLNAP WMLDKLGG +AP+PS+GPHK RECLPL++ L
Sbjct: 5 FVKYVILDQRSFWARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILIL 64
Query: 213 RNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGR 392
RNRLKYALT EV+ I+ QR + VDGKVRTD TYPAGFMDVVSI KT E FRL+YD KGR
Sbjct: 65 RNRLKYALTYREVISILMQRHVMVDGKVRTDKTYPAGFMDVVSIAKTGENFRLLYDTKGR 124
Query: 393 FTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTK 572
F +H I E+AK+KLCKV+ V G K +P+L T+DGRTIRYPDPLIK ND+I++D+ T K
Sbjct: 125 FRLHSIKDEDAKFKLCKVRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDTIKIDLETNK 184
Query: 573 IMDFIKFESGNLCMITGGRNLGACG 647
I+DFIKF+ GN+ M+TGGRN G G
Sbjct: 185 IVDFIKFDVGNIVMVTGGRNTGRVG 209
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 293 bits (720), Expect = 9e-80
Identities = 131/193 (67%), Positives = 158/193 (81%)
Frame = +3
Query: 69 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 248
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT E
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 249 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 428
V+ I+ QR + VDGKVRTD TYPAGFMDV+SI KT E +RL+YD KGRF + + E+AK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAK 120
Query: 429 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 608
+KLCKV+ V G K +PYL T+DGRTIRYPDPLIK ND+I++D+ T KI+DFIKF+ GN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV 180
Query: 609 CMITGGRNLGACG 647
M+TGGRN G G
Sbjct: 181 VMVTGGRNTGRVG 193
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 293 bits (718), Expect = 2e-79
Identities = 130/193 (67%), Positives = 158/193 (81%)
Frame = +3
Query: 69 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 248
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT E
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 249 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 428
V+ I+ QR + VDGKVRTD TYPAGFMDV+SI KT E +RL+YD KGRF + + E+AK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAK 120
Query: 429 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 608
+KLCKV+ V G K +PYL T+DGRTIRYPDP+IK ND+I++D+ T KI+DFIKF+ GN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNV 180
Query: 609 CMITGGRNLGACG 647
M+TGGRN G G
Sbjct: 181 VMVTGGRNTGRVG 193
>09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078
Length = 574
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 213 SGKSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 112
+G+SPG + RA GD L V+VH T++ W
Sbjct: 50 NGESPGPTIRAAQGDTLVVTVHNMLDTENTAIHW 83
>05_01_0154 +
1020650-1022050,1022304-1022373,1022496-1022617,
1022753-1023031,1023402-1023779,1024079-1024188,
1024394-1024622,1024725-1025303
Length = 1055
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 602 ELVYDHGRX*LGGVWAPSCPARD-IPGSFDIVHIK 703
E+ DH G W PS PARD +PG DIV ++
Sbjct: 141 EIQSDHAAVLRDGDWLPSLPARDLVPG--DIVQLR 173
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -2
Query: 226 FRRFLRKITRGKHSRNLWGPVDGLGAYTPPSLSNIHALGAFKR 98
F L ++ + L G G+G Y PPSLSN + AFKR
Sbjct: 35 FNVALNRLPASAGASPLLGHGHGVGVYYPPSLSNA-LVAAFKR 76
>12_02_0513 -
19906147-19906271,19906470-19906791,19907091-19907695,
19908569-19908617
Length = 366
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 185 AQLVGTG*RSRCIHTAK-FVQHPCFGSV*ALQMLLRASR 72
++ V G R+RC+H A V+ P FG + ++L ASR
Sbjct: 39 SRAVKAGRRARCVHHASALVRPPSFGRLAMFVLILSASR 77
>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 110 SQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESS----EVCFDRKRSPENCETTP 274
+QS+ V + RCV ETV + P + R+ G+F + + FD+ + +CE P
Sbjct: 894 NQSILVSLSSRCVWKETVCQRPHLLRIKYYGNFDKPLGRFLRDQLFDQNNNCISCELPP 952
>06_03_0256 -
18841627-18841993,18842087-18842415,18842512-18842749,
18844091-18844373,18844773-18844989,18845067-18845360
Length = 575
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +3
Query: 606 LCMITGGRNLGACGHHRVPRE-TSPAPSTLCTSRTPR 713
LC T +GA G R R T P P LC +R P+
Sbjct: 46 LCFATSKSKVGALGDGRSRRRHTEPRPHKLCHARYPQ 82
>02_05_0227 -
26994462-26994591,26994714-26994803,26994895-26995022,
26995179-26995573,26995666-26995792,26995909-26995986,
26996096-26996198,26996315-26996589,26996700-26996726
Length = 450
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +1
Query: 640 RVGTIVSRERHPRLLRHCAHQGLHGTHPSATKVEQRVXKSXKGXK 774
RVG +V +E HP R A +G+ A K QRV S G K
Sbjct: 235 RVG-LVGKEPHPNTKRTIASSAKNGSSLPAMKKIQRVQPSSNGQK 278
>04_04_1540 - 34245246-34245797,34246904-34247157,34247989-34248577
Length = 464
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -2
Query: 727 PKGVSRGVLDVHNVEGAGDVSRGTRWCPHAPKLRPPVIIHKFPDSNLMK 581
P+ ++ G+LD++ A D P P RPP +PDS L+K
Sbjct: 54 PRALNHGLLDLYWSLPAADSRIPASSDPDHPPPRPPRAHSPYPDSPLIK 102
>02_01_0285 -
1913425-1914065,1914094-1914177,1914249-1915140,
1915205-1915249,1915335-1915870,1915987-1916041
Length = 750
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 363 FRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 467
+ LIYD++G + + P++A L ++ V T P
Sbjct: 147 YALIYDIQGSLALPILDPDDASSPLAVLELVTTAP 181
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,142,410
Number of Sequences: 37544
Number of extensions: 543651
Number of successful extensions: 1658
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1657
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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