Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_A07
(1041 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344... 31 2.0
07_01_0080 + 587674-588510 30 2.6
02_05_0686 - 30900748-30902167,30903442-30904742 30 2.6
01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149 29 4.6
05_04_0011 + 17139322-17139451,17139552-17140174 29 6.1
01_03_0005 + 11568545-11569119,11569179-11569191 29 6.1
06_03_1006 + 26844161-26844198,26844304-26844372,26844526-268445... 25 6.8
12_01_0526 - 4171313-4171417,4171514-4171597,4171688-4171758,417... 29 8.0
03_01_0515 - 3864796-3865425 29 8.0
>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
29334956-29335045,29335120-29335155,29335222-29336553,
29337331-29337497,29337519-29337724,29337815-29338036,
29338332-29338381,29338754-29338870,29339471-29339551,
29339656-29339694,29340464-29340636,29340769-29340826,
29340934-29340987,29341066-29341613,29341695-29341755,
29342180-29342260,29342448-29342630,29342908-29343162,
29343304-29343423,29343497-29344901,29344988-29345085,
29345164-29345218,29345307-29345366,29346498-29346697
Length = 2077
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 511 PPXPXGGEKXPPPXFXPPPXP 573
PP P G+ PPP PPP P
Sbjct: 1936 PPPPVEGKPKPPPHAPPPPPP 1956
>07_01_0080 + 587674-588510
Length = 278
Score = 30.3 bits (65), Expect = 2.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 511 PPXPXGGEKXPPPXFXPPPXP 573
PP P G PPP PPP P
Sbjct: 96 PPPPSSGSPPPPPPPPPPPPP 116
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.3 bits (65), Expect = 2.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 511 PPXPXGGEKXPPPXFXPPPXPXXGG 585
PP P G PPP PPP P G
Sbjct: 337 PPPPPKGPPPPPPAKGPPPPPPPKG 361
Score = 29.5 bits (63), Expect = 4.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 511 PPXPXGGEKXPPPXFXPPPXPXXG 582
PP P PPP PPP P G
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKG 352
>01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149
Length = 248
Score = 29.5 bits (63), Expect = 4.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 511 PPXPXGGEKXPPPXFXPPP 567
PP P GE PPP PPP
Sbjct: 82 PPPPAEGEAAPPPADAPPP 100
>05_04_0011 + 17139322-17139451,17139552-17140174
Length = 250
Score = 29.1 bits (62), Expect = 6.1
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +1
Query: 451 PFXXPRGGXFLKKXWGXXXXPPXPXGGEKXPPPXFXPPPXPXXGG 585
P P GG + P P E PPP PPP P GG
Sbjct: 73 PPSPPNGGNVIGNGKRLTPTGPDPIHNEFQPPPP-PPPPSPPNGG 116
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = -3
Query: 583 PPXGGXGGXXKXGGX--FFPPPXGXG 512
PP G GG GG ++PPP G G
Sbjct: 95 PPYSGGGGGSSTGGGGIYYPPPTGGG 120
>06_03_1006 +
26844161-26844198,26844304-26844372,26844526-26844591,
26844831-26844902,26844982-26845053,26846179-26846244,
26846409-26846881,26846966-26847324,26847429-26847697,
26847780-26847918,26848323-26848462,26848612-26848768,
26848925-26848978,26849457-26849539,26851085-26851136
Length = 702
Score = 24.6 bits (51), Expect(2) = 6.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 826 PPPPPPXFFXXF 791
PPPPPP F F
Sbjct: 327 PPPPPPPFLPPF 338
Score = 22.6 bits (46), Expect(2) = 6.8
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 838 FXXXPPPPPPXFF 800
F PPPPPP F
Sbjct: 322 FAVDPPPPPPPPF 334
>12_01_0526 -
4171313-4171417,4171514-4171597,4171688-4171758,
4171814-4171891,4174482-4174569,4174659-4174850,
4174939-4175802
Length = 493
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 511 PPXPXGGEKXPPPXFXPPPXP 573
PP P E PPP PPP P
Sbjct: 148 PPPPPPQESTPPPPPPPPPAP 168
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.7 bits (61), Expect = 8.0
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 511 PPXPXGGEKXPPPXFXPPPXP 573
PP P PPP PPP P
Sbjct: 91 PPPPPAASPPPPPPSPPPPSP 111
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,128,058
Number of Sequences: 37544
Number of extensions: 387877
Number of successful extensions: 3770
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3437
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3071102548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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