Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_A05
(942 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0374 + 22649455-22650024,22650085-22650637,22650812-226511... 32 0.76
02_04_0172 - 20595357-20596129,20596994-20597138 31 1.8
02_01_0206 + 1388149-1388330,1388527-1388629,1388896-1388964,138... 30 2.3
10_08_0185 + 15578607-15578845,15580422-15580536,15580656-155807... 30 3.1
06_01_0155 + 1152607-1152721,1152781-1154129 29 4.1
06_01_0152 + 1136202-1136316,1136376-1137583 29 4.1
01_07_0120 + 41185884-41186127,41187228-41187310,41188596-411886... 29 4.1
07_03_1070 - 23744749-23744808,23746144-23746173,23746848-237469... 29 5.4
05_06_0074 + 25375431-25375631,25375785-25376195,25376474-253765... 29 5.4
05_03_0307 + 12027505-12027565,12028300-12028925 29 5.4
09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006 29 7.1
08_01_0431 + 3779519-3780393,3780402-3780768 29 7.1
03_02_0341 - 7643426-7643973,7644340-7644505 29 7.1
08_01_0288 - 2327613-2327618,2327664-2327709,2327960-2328094,233... 28 9.4
05_03_0178 - 9254353-9254658,9254857-9255189 28 9.4
04_04_0173 - 23294511-23294601,23294719-23294849,23295160-232954... 28 9.4
>09_06_0374 +
22649455-22650024,22650085-22650637,22650812-22651147,
22651171-22652605,22652939-22653062
Length = 1005
Score = 31.9 bits (69), Expect = 0.76
Identities = 34/120 (28%), Positives = 46/120 (38%), Gaps = 2/120 (1%)
Frame = -1
Query: 525 MGAGASFLDSRNALGASGSWLVCLWEQN*PLPCERPSCFPRSPGMRVPRSGSARARLHCS 346
M GAS + R G G+ EQ+ P R PG P + + +
Sbjct: 280 MAVGAS--EERAPKGHDGAGGSRRGEQSTPRGGRASGSRDRGPGSSRPADARGKRKQGGT 337
Query: 345 R--ASPCGGGAELVAXVEVGGPDGAEHVLVVAGERDLQGGPRRFRLSSPVKLPACLRARV 172
+ P GGGA A P+GA GER + PR R+ + PA LR R+
Sbjct: 338 PPPSPPRGGGA---ARASNRRPEGAAPTSQPEGERKKKRPPRSHRVPPAIPSPASLRPRI 394
>02_04_0172 - 20595357-20596129,20596994-20597138
Length = 305
Score = 30.7 bits (66), Expect = 1.8
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -1
Query: 339 SPCGGGAELVAXVEVGGPDGAEHVLVVAGERDLQGGPRRFRLSSPVKLPACLRARVGTCL 160
SP GAE++ + VGG + + ++A DL G P L V A LRA + +C
Sbjct: 201 SPVADGAEILFDMPVGGEEILFDMPILA--LDLDGQPMACSLPPSVVQNAALRAILASCC 258
Query: 159 -PLAKHAH 139
PL H
Sbjct: 259 KPLCPAPH 266
>02_01_0206 +
1388149-1388330,1388527-1388629,1388896-1388964,
1389684-1389803,1390352-1390482,1390840-1390881,
1390961-1391138,1391241-1391319,1391441-1391610,
1392503-1392629,1392731-1392846,1392926-1393033,
1393118-1393180,1393283-1393456,1393814-1393978
Length = 608
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/58 (32%), Positives = 23/58 (39%)
Frame = -2
Query: 497 RETPWALQVRGWFVCGNKIDLCXANARAASPEARECGFPVQAQPVPVYIVPERAPAEA 324
R W+ RG G + C A A +A+P G PV A P P A EA
Sbjct: 10 RRRGWSSGTRGTSRGGTRSGGCSATASSATPSPPPTGPPVTASPSSASTRPSLAVGEA 67
>10_08_0185 +
15578607-15578845,15580422-15580536,15580656-15580745,
15581935-15582033,15582154-15582258
Length = 215
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = -1
Query: 438 PLPCERPSCFPRSPGMRVPRSGSARARLHCSRASPCGGGAELVAXVEVGG 289
PLP + S +P +R PR G R L RA+ GG E V GG
Sbjct: 32 PLPSLKNSPLA-NPDLRAPRRGGGRLDLAARRAARLSGGGEGGLDVGSGG 80
>06_01_0155 + 1152607-1152721,1152781-1154129
Length = 487
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 432 PCERPSCFPRSPGMRVPRSGSARARLHCSRASPCG 328
PC P C+P+ + PR A + C A+ CG
Sbjct: 179 PCPMPECYPQQNALFDPRRSRTSAAVPCGSAA-CG 212
>06_01_0152 + 1136202-1136316,1136376-1137583
Length = 440
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 432 PCERPSCFPRSPGMRVPRSGSARARLHCSRASPCG 328
PC P C+P+ + PR A + C A+ CG
Sbjct: 179 PCPMPECYPQQNALFDPRRSRTSAAVPCGSAA-CG 212
>01_07_0120 +
41185884-41186127,41187228-41187310,41188596-41188647,
41188729-41188854,41188967-41189049,41189308-41189490,
41189901-41190237,41190607-41190750,41190854-41190939,
41191069-41191113
Length = 460
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 522 PFPNAPQLQHAGRREWTTCSNRKVGASLSAAHSDVINRN 638
P+P P +Q+AG +NR G S S+ ++N N
Sbjct: 315 PYPPVPGVQYAGSYPGGLMNNRPFGNSFSSIKVPIVNAN 353
>07_03_1070 -
23744749-23744808,23746144-23746173,23746848-23746977,
23747431-23747519,23748486-23748513,23748700-23748965
Length = 200
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -2
Query: 605 QRCAHLSV*TCSPLPPPSVLKLGRVGKWALGRVSLIRETPWALQVRGWFVCGN 447
+ CA L V SP S G+VG+W +++ + W + GW G+
Sbjct: 92 EECAALQVVIYSPARTASQQGSGKVGRW---KINFVSTQKWENPLMGWTSTGD 141
>05_06_0074 +
25375431-25375631,25375785-25376195,25376474-25376589,
25377016-25377064,25377722-25378247,25378339-25379060
Length = 674
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 129 LFVCARAWRAVDTCRHVRGDKPAASQVNSDGTSGGRP 239
L+ C R R D C+H A +N DG G RP
Sbjct: 353 LWDCGRPVRGSDECQHYCNPYHAGLALNDDGLLGTRP 389
>05_03_0307 + 12027505-12027565,12028300-12028925
Length = 228
Score = 29.1 bits (62), Expect = 5.4
Identities = 28/77 (36%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = -1
Query: 432 PCERPSCFPRSPGMRVPR-SGSARARLHCSRASPCGGGAELVAXVEVGGPDGAEHVLVVA 256
P +P R+ R PR S SAR R A P GGGA A + GG G H VA
Sbjct: 59 PMRQPHLRARAADGRAPRDSHSARPRA-AKPARPAGGGAR--APMVAGG--GHRHGGAVA 113
Query: 255 GERDLQGGPRRFRLSSP 205
+ +G RR + P
Sbjct: 114 KRGEGKGEKRRRSSAHP 130
>09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006
Length = 585
Score = 28.7 bits (61), Expect = 7.1
Identities = 26/93 (27%), Positives = 36/93 (38%), Gaps = 2/93 (2%)
Frame = -1
Query: 552 RVEVGARWEMGAGASFLDSRNALGASGSWLVCLWEQN*PLPCERPSCFPRSPGMRVPRSG 373
R VG RWE G + R LG + + + PL C+R R + V +G
Sbjct: 140 RTHVGERWEWGEEDAKTVIRRVLGLDSAEQTLIPDGILPLCCDR----DRESILAVMSAG 195
Query: 372 SARARLHCSRASPCG--GGAELVAXVEVGGPDG 280
+R+ + S G GG V GP G
Sbjct: 196 RSRSYRGGAGGSAAGVSGGDATVCGSRTSGPGG 228
>08_01_0431 + 3779519-3780393,3780402-3780768
Length = 413
Score = 28.7 bits (61), Expect = 7.1
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = -1
Query: 624 RQSAPRSTMRPPFCLNM*ST--PAAQRV---EVGARWEMGAGASFLDSRNALGASGSWLV 460
R P +T RPP+ L PAA + G + A+ LD R GAS WLV
Sbjct: 50 RLRLPSTTARPPWLLYSCDAYGPAAAALYCPATGKSLRVPLPAALLDGRPVFGASQGWLV 109
Query: 459 CLWE 448
+ E
Sbjct: 110 TVDE 113
>03_02_0341 - 7643426-7643973,7644340-7644505
Length = 237
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 363 ARLHCSRASPC-GGGAELVAXVEVGGPDGAEHVLVVAGE 250
ARLH + ++PC G ++ + G DGA+ + +AG+
Sbjct: 105 ARLHSASSAPCPGQEPSMIVAAQQPGHDGAKTFVALAGK 143
>08_01_0288 -
2327613-2327618,2327664-2327709,2327960-2328094,
2330218-2330612,2330626-2330820
Length = 258
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -2
Query: 440 DLCXANARAASPEARECGFPVQAQPVPVYIVPERAPAEAALSLW 309
D C A+ CG P P+ VY V ERAP + +++
Sbjct: 34 DTCQKAFGTAAAPTDACGAPPCITPMHVYCVSERAPDDGEATVF 77
>05_03_0178 - 9254353-9254658,9254857-9255189
Length = 212
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 401 LRGKQLGRSXGKGQFCSHKQTNHEPEAPKAFRESRKLAPAPISQRAPTSTRWAA 562
+RG++ G+ + E A A RE R PAP ++ P +T WA+
Sbjct: 19 VRGRRENTWKGEAASAGERGGGEEAAAVAATREGR---PAPTQKQKPKATAWAS 69
>04_04_0173 -
23294511-23294601,23294719-23294849,23295160-23295483,
23296016-23296147,23296225-23296373,23296536-23296670,
23296997-23297090,23297199-23297318,23298096-23298182,
23298273-23298386,23299089-23299270,23299960-23300023,
23300191-23300337,23300636-23300845,23301048-23301217,
23301355-23301477,23301589-23301661,23301765-23301857
Length = 812
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 99 LCRITLSVDCSTCKMMNDQILRI 31
L RI +++D TCK+MN+ ++I
Sbjct: 599 LFRIIVTLDAGTCKLMNEDAIKI 621
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,332,538
Number of Sequences: 37544
Number of extensions: 644701
Number of successful extensions: 2451
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2449
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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