Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_A05
         (942 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80215-10|CAB02271.3|  175|Caenorhabditis elegans Hypothetical p...    31   1.6  
U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical pr...    29   6.4  
AL117204-4|CAB55144.1|  281|Caenorhabditis elegans Hypothetical ...    29   6.4  
Z81505-1|CAB04122.1|  673|Caenorhabditis elegans Hypothetical pr...    28   8.4  
U41019-1|AAM51510.1|  542|Caenorhabditis elegans Hypothetical pr...    28   8.4  

>Z80215-10|CAB02271.3|  175|Caenorhabditis elegans Hypothetical
           protein C36B1.6 protein.
          Length = 175

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = +2

Query: 116 TVALFVCLCACLASG--RHVPTRARRQAGS-FTG 208
           T  +F+C C C+ +G  R VPT    Q G+ +TG
Sbjct: 137 TTCIFICCCCCIFTGAYRSVPTNEEVQMGAQYTG 170


>U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical
           protein T23H2.3 protein.
          Length = 1009

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 453 TNKPTTNLKRPRRFANQGNSPQRPFPNAPQ 542
           T+ P      P    + GNSPQ P+P +P+
Sbjct: 189 TSPPPNRSTLPSVETSSGNSPQTPYPGSPE 218


>AL117204-4|CAB55144.1|  281|Caenorhabditis elegans Hypothetical
           protein Y116A8C.11 protein.
          Length = 281

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -2

Query: 779 NFEKENPNIGLPRRSVKRRIKLLEAGVEVER 687
           NFEKEN N+      +K RI  LE  V+ E+
Sbjct: 40  NFEKENENLADENEILKTRIASLEKDVKQEK 70


>Z81505-1|CAB04122.1|  673|Caenorhabditis elegans Hypothetical
           protein F16A11.1 protein.
          Length = 673

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 471 NLKRPRRFANQGNSPQRPFPNAPQLQHAGRRE 566
           N+KR R   N   SP+ PF N  +  H  R E
Sbjct: 71  NIKRLREARNASASPRDPFSNGHRYGHRSRSE 102


>U41019-1|AAM51510.1|  542|Caenorhabditis elegans Hypothetical
           protein C04E7.4 protein.
          Length = 542

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -3

Query: 241 SGRPPEVPSEFTCEAAGLSPRTCRHVSTARQARAQTNKQRYSL 113
           S + P V +EF+C +    P +C H+S   +   + ++Q  SL
Sbjct: 328 SNKAPMVSNEFSCLSGEPFPSSCYHISKQVRFARKQDEQTISL 370


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,950,958
Number of Sequences: 27780
Number of extensions: 477911
Number of successful extensions: 1407
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1407
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)