Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_A02
         (851 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1008 - 7987936-7988628,7988923-7989102                           31   1.5  
06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    29   4.7  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.2  
10_05_0078 + 8891364-8891529,8891535-8891797                           28   8.2  

>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 720 RKRHASRREKGGQVSXKRQGRNQESARGSFQGETPG 613
           R R   RR  GG+V+ +   R++   RG+++GE  G
Sbjct: 239 RVRRRGRRGGGGEVNGEEAARSRRRRRGAWEGEEEG 274


>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = +1

Query: 517 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALL-VPTL-PLXGYLSA 690
           CWR  +        T  D Q    +    +KD    P + PSC L+ +P L PL   L A
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQPLHYSLYA 342

Query: 691 F 693
           F
Sbjct: 343 F 343


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 297 NESAN---ARGEAVCVLGALPLPRSLTRCAR 380
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>10_05_0078 + 8891364-8891529,8891535-8891797
          Length = 142

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 637 PSCALLVPTLPLXGYLSAFLPS 702
           P CA L P +P+ G L  F+PS
Sbjct: 92  PPCAFLPPDVPVEGILMIFVPS 113


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,308,038
Number of Sequences: 37544
Number of extensions: 445579
Number of successful extensions: 1283
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1283
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)