Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_P24
(858 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 42 1e-04
SPBC1347.09 |||hexaprenyldihydroxybenzoate methyltransferase|Sch... 39 8e-04
SPBC21C3.07c |||actin binding methyltransferase |Schizosaccharom... 38 0.002
SPCC162.05 |coq3||hexaprenyldihydroxybenzoate methyltransferase|... 37 0.004
SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr ... 36 0.006
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 35 0.017
SPAC750.03c |||methyltransferase |Schizosaccharomyces pombe|chr ... 33 0.039
SPBC1348.04 |||methyltransferase |Schizosaccharomyces pombe|chr ... 33 0.039
SPAC977.03 |||methyltransferase |Schizosaccharomyces pombe|chr 1... 33 0.039
SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr 3... 32 0.091
SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomy... 29 0.84
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 28 1.5
SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr... 28 1.5
SPCC1259.11c |gyp2||GTPase activating protein Gyp2 |Schizosaccha... 27 2.6
SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit |Sch... 27 4.5
SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces p... 26 7.9
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 26 7.9
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 41.5 bits (93), Expect = 1e-04
Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 248 RTQNYKDFLIGLLKNNGCKTVLDAACGTGIDSMMLVNEGF-KVVSVDASD 394
RT+ Y+DF+ KTVLD CGTGI SM G KV +VD SD
Sbjct: 239 RTEGYRDFVYHNKHIFAGKTVLDVGCGTGILSMFCAKAGAKKVYAVDNSD 288
>SPBC1347.09 |||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 284
Score = 39.1 bits (87), Expect = 8e-04
Identities = 34/117 (29%), Positives = 56/117 (47%)
Frame = +2
Query: 305 TVLDAACGTGIDSMMLVNEGFKVVSVDASDKMLKHALKARWDKRKNPKYDDWVIXEANWE 484
++LD ACGTG+ S L ++V +D S M+ ++ K PK + +
Sbjct: 80 SILDFACGTGLISQHLFPYCKQIVGIDVSQDMV-DVYNEKFRKMNIPKERACAYVLSLDD 138
Query: 485 TLPQDIETFLPDTQFDAVICLGNSFAHLLDEYGDXRMQKLCLSPFAKCLKPRGLLFI 655
E F T+FDAV+C ++ H+ D +Q++ + +K LKP G LF+
Sbjct: 139 LDGNGDEPF--STEFDAVVC-SMAYHHIKD------LQEV-TNKLSKLLKPNGRLFV 185
>SPBC21C3.07c |||actin binding methyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 281
Score = 37.9 bits (84), Expect = 0.002
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 4/159 (2%)
Frame = +2
Query: 185 DQYADGKAAKTWNKFIGDSNQRTQNYKDFLIGLLKNNGCKTVLDAACGTGIDSMMLV--- 355
++Y D K KF + Q + + L L ++ G K++L+ CG G ++
Sbjct: 80 ERYWDQFYGKNEGKFFMNRRWIAQEFPELLDLLKEDAGEKSILEIGCGAGNTIWPILKEN 139
Query: 356 -NEGFKVVSVDASDKMLKHALKARWDKRKNPKYDDWVIXEANWETLPQDIETFLPDTQFD 532
N K+ +VD S+K + ++NP YD + W+ D+ + + D
Sbjct: 140 KNSNLKIFAVDYSEKAIDVV-------KQNPLYDAKFCSASVWDLAGSDLLRSIEEASID 192
Query: 533 AVICLGNSFAHLLDEYGDXRMQKLCLSPFAKCLKPRGLL 649
A I L F+ L + ++ L + LKP GL+
Sbjct: 193 A-ITLIFCFSALSPDQWQQAIENL-----YRLLKPGGLI 225
>SPCC162.05 |coq3||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 271
Score = 36.7 bits (81), Expect = 0.004
Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 6/119 (5%)
Frame = +2
Query: 209 AKTWNKFIGDS---NQRTQNYKDFLIGLLKNNGC---KTVLDAACGTGIDSMMLVNEGFK 370
AKTW + G S + DF+ + + C K +LD CG GI S + G
Sbjct: 42 AKTWWDWDGGSRLLHLMNSTRLDFMTEVFRERNCFSGKKILDIGCGGGILSESMARLGAS 101
Query: 371 VVSVDASDKMLKHALKARWDKRKNPKYDDWVIXEANWETLPQDIETFLPDTQFDAVICL 547
V +VDAS ++ A +K+ D + E + +E T FD V C+
Sbjct: 102 VTAVDASPMAIEVA-------KKHASLDP--VLNGRLEYIHGSVEGSQLPTTFDVVTCM 151
>SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 268
Score = 36.3 bits (80), Expect = 0.006
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +2
Query: 281 LLKNNGCKTVLDAACGTGIDSMMLVNEGFKVVSVDASDKMLKHALKAR 424
LL G +LD CG+GI + + ++G VV +D S ML AL+++
Sbjct: 42 LLDAEGPSFILDIGCGSGISTQIGESQGHVVVGMDISPSMLSVALESQ 89
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 34.7 bits (76), Expect = 0.017
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 182 KDQYADGKAAKTWNKFIGDSNQRTQNYKDFLIGLLKNNGCKTVLDAACGTGIDSMMLVNE 361
KD Y D + ++ + + RT +Y+D ++ K VLD CGTGI SM
Sbjct: 16 KDYYFDSYSHWGIHEEMLKDDVRTLSYRDAIMQNPHLFRDKIVLDVGCGTGILSMFCARA 75
Query: 362 GFK-VVSVDASD 394
G K V VD S+
Sbjct: 76 GAKHVYGVDMSE 87
>SPAC750.03c |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 145
Score = 33.5 bits (73), Expect = 0.039
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +2
Query: 302 KTVLDAACGTGIDSMMLVNEGFKVVSVDASDKMLKHALKARWDKRKNPKYD 454
+ VLDA C ++ L + G+KVV +D S++ + A+ ++ N ++
Sbjct: 11 ENVLDAGCEPNRNARYLASLGYKVVGIDISERAISKAIDKTSSEKSNVNFN 61
>SPBC1348.04 |||methyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 145
Score = 33.5 bits (73), Expect = 0.039
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +2
Query: 302 KTVLDAACGTGIDSMMLVNEGFKVVSVDASDKMLKHALKARWDKRKNPKYD 454
+ VLDA C ++ L + G+KVV +D S++ + A+ ++ N ++
Sbjct: 11 ENVLDAGCEPNRNARYLASLGYKVVGIDISERAISKAIDKTSSEKSNVNFN 61
>SPAC977.03 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 145
Score = 33.5 bits (73), Expect = 0.039
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +2
Query: 302 KTVLDAACGTGIDSMMLVNEGFKVVSVDASDKMLKHALKARWDKRKNPKYD 454
+ VLDA C ++ L + G+KVV +D S++ + A+ ++ N ++
Sbjct: 11 ENVLDAGCEPNRNARYLASLGYKVVGIDISERAISKAIDKTSSEKSNVNFN 61
>SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 260
Score = 32.3 bits (70), Expect = 0.091
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +2
Query: 308 VLDAACGTGIDSMMLVNEGFKVVSVDASDKMLKHA 412
+LD CG G+ + LV++ +VV +DAS M+K A
Sbjct: 37 LLDLGCGDGVLTNELVSQCRRVVGIDASPDMIKAA 71
>SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 357
Score = 29.1 bits (62), Expect = 0.84
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 302 KTVLDAACGTGI-DSMMLVNEGFKVVSVDASDKMLKHALKARWDKRKNPKYDDWVIXEAN 478
+ VL+ G GI D+ + E V ++ +LKH K W R+N ++ E
Sbjct: 187 RRVLNVGFGLGIIDTFLQEKEPSLHVIIEPHPDVLKHMRKNGWMDRENV-----IVYETT 241
Query: 479 WETLPQDI 502
WE DI
Sbjct: 242 WENAINDI 249
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 636 GFRHFAKGLRHSFCILXSPYSSNKWANEFPRHM 538
GF HF K FCI Y++ K EF RH+
Sbjct: 460 GFEHFKKNSFEQFCI---NYANEKLQQEFYRHV 489
>SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1471
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 636 GFRHFAKGLRHSFCILXSPYSSNKWANEFPRHM 538
GF HF K FCI Y++ K EF +H+
Sbjct: 442 GFEHFEKNSMEQFCI---NYANEKLQQEFNKHV 471
>SPCC1259.11c |gyp2||GTPase activating protein Gyp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 720
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -1
Query: 486 VSQFASSITQSSYLGFFLLSQRALRACFNILSEASTDTTLNPSFTSIMESIPVPQAASKT 307
V Q +S+ +S +G FLLS + R CF SE++ + + P A+S T
Sbjct: 122 VRQLHASLEDASSVGLFLLSLASERVCF---SESANSQEIESIDLGLGSQFGYPIASSNT 178
>SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 26.6 bits (56), Expect = 4.5
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -1
Query: 651 NRSPRGFRHFAKGLRHSFCILXSPYSSNKWANEFPRHMTA 532
+R P +R AK HS C+L S + ++ + P A
Sbjct: 441 DRLPLHYRVLAKAAEHSICLLQSSIAPDEATKKLPYEFIA 480
>SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 723
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 377 SVDASDKML-KHALKARWD-KRKNPKYDDWVIXEANWETLPQDIETFLPDTQFD 532
S D D+ L +H+ + D +++ + +D + E +W+ QD+E L D D
Sbjct: 582 SYDLPDRNLSEHSYSSSSDDEQRISELNDRELDEIDWQAADQDVENALKDLSDD 635
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 25.8 bits (54), Expect = 7.9
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +2
Query: 263 KDFLIGLLKNNGCKTVLDAACGTGIDSMMLVNEG-FKVVSVDASDK-MLKHALKARWDK 433
K+F+I LK+NG T++ CG G + + + + V ++AS++ ML+ +AR K
Sbjct: 805 KEFMISTLKHNGYITLM---CGDGTNDVGALKQAHVGVALLNASEEDMLEMQERARNQK 860
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,129,965
Number of Sequences: 5004
Number of extensions: 64057
Number of successful extensions: 207
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 426466470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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