Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_P23
(1340 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.004
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.004
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.004
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 38 0.012
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 38 0.012
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 37 0.037
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 37 0.037
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 37 0.037
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.35
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.35
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 33 0.35
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 0.45
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 0.58
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 33 0.61
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.61
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.61
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 32 1.1
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 31 1.4
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 31 1.4
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 2.4
Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical pr... 31 2.4
Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical pr... 31 2.4
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 31 2.4
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 31 2.4
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 31 2.4
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 30 3.2
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 30 3.2
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 30 3.2
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 5.6
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 5.6
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 29 5.6
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 7.5
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 7.5
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 7.5
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 7.5
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 7.5
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 29 9.9
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 9.9
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect(2) = 0.004
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +1
Query: 592 PGGXPPXPPXXGGGXXVGXPXXPPPKKXVWGXEKXKGGXPPP 717
P G PP PP G + PPP + G PPP
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 295
Score = 28.7 bits (61), Expect = 9.9
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +1
Query: 592 PGGXPPXPPXXGG--GXXVGXPXXPPPKKXVWGXEKXKGGXPPP 717
P G PP PP G G P PPP + G PPP
Sbjct: 297 PTGSPPPPPAGGSPPPPRAGSPPPPPPPR----GSPPTGSLPPP 336
Score = 25.0 bits (52), Expect(2) = 0.004
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 838 PPXXPXPPXPXXXFFFXPPPPPP 906
PP PP P PPPPPP
Sbjct: 304 PPAGGSPPPPRAG---SPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect(2) = 0.004
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +1
Query: 592 PGGXPPXPPXXGGGXXVGXPXXPPPKKXVWGXEKXKGGXPPP 717
P G PP PP G + PPP + G PPP
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 280
Score = 28.7 bits (61), Expect = 9.9
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +1
Query: 592 PGGXPPXPPXXGG--GXXVGXPXXPPPKKXVWGXEKXKGGXPPP 717
P G PP PP G G P PPP + G PPP
Sbjct: 282 PTGSPPPPPAGGSPPPPRAGSPPPPPPPR----GSPPTGSLPPP 321
Score = 25.0 bits (52), Expect(2) = 0.004
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 838 PPXXPXPPXPXXXFFFXPPPPPP 906
PP PP P PPPPPP
Sbjct: 289 PPAGGSPPPPRAG---SPPPPPP 308
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect(2) = 0.004
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +1
Query: 592 PGGXPPXPPXXGGGXXVGXPXXPPPKKXVWGXEKXKGGXPPP 717
P G PP PP G + PPP + G PPP
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 274
Score = 28.7 bits (61), Expect = 9.9
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +1
Query: 592 PGGXPPXPPXXGG--GXXVGXPXXPPPKKXVWGXEKXKGGXPPP 717
P G PP PP G G P PPP + G PPP
Sbjct: 276 PTGSPPPPPAGGSPPPPRAGSPPPPPPPR----GSPPTGSLPPP 315
Score = 25.0 bits (52), Expect(2) = 0.004
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 838 PPXXPXPPXPXXXFFFXPPPPPP 906
PP PP P PPPPPP
Sbjct: 283 PPAGGSPPPPRAG---SPPPPPP 302
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 38.3 bits (85), Expect = 0.012
Identities = 30/111 (27%), Positives = 33/111 (29%), Gaps = 6/111 (5%)
Frame = +1
Query: 592 PGGXPPXPPXXGGGXXVGXPXXPPPKKXVWGXEKXKGGXPPPXXKXXFFFXXXXXXXXXX 771
PG P PP G + P PPP G G PPP F
Sbjct: 281 PGMTPRPPPPPSSG--MWPPPPPPPPGRTPGPPGMPGMPPPPPPSR--FGPPGMGGMPPP 336
Query: 772 XXXXXXXXGXXXXXXPPFF------FFXPPXXPXPPXPXXXFFFXPPPPPP 906
G PP + + PP PP P PPPPPP
Sbjct: 337 PPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
Score = 30.7 bits (66), Expect = 2.4
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 817 PPFFFFXPPXXPXPPXPXXXFFFXPPPPPP 906
PP P P PP P + PPPPPP
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPP 303
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 38.3 bits (85), Expect = 0.012
Identities = 30/111 (27%), Positives = 33/111 (29%), Gaps = 6/111 (5%)
Frame = +1
Query: 592 PGGXPPXPPXXGGGXXVGXPXXPPPKKXVWGXEKXKGGXPPPXXKXXFFFXXXXXXXXXX 771
PG P PP G + P PPP G G PPP F
Sbjct: 291 PGMTPRPPPPPSSG--MWPPPPPPPPGRTPGPPGMPGMPPPPPPSR--FGPPGMGGMPPP 346
Query: 772 XXXXXXXXGXXXXXXPPFF------FFXPPXXPXPPXPXXXFFFXPPPPPP 906
G PP + + PP PP P PPPPPP
Sbjct: 347 PPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
Score = 30.7 bits (66), Expect = 2.4
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 817 PPFFFFXPPXXPXPPXPXXXFFFXPPPPPP 906
PP P P PP P + PPPPPP
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPP 313
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.7 bits (81), Expect = 0.037
Identities = 18/41 (43%), Positives = 18/41 (43%)
Frame = +1
Query: 595 GGXPPXPPXXGGGXXVGXPXXPPPKKXVWGXEKXKGGXPPP 717
GG PP PP G G P PPP G GG PPP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPP---GGLPPISGGPPPP 761
Score = 33.1 bits (72), Expect = 0.46
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 592 PGGXPPXPPXXGGGXXVGXPXXPPP 666
PGG PP PP G G P PPP
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 32.3 bits (70), Expect = 0.80
Identities = 32/103 (31%), Positives = 32/103 (31%)
Frame = +1
Query: 598 GXPPXPPXXGGGXXVGXPXXPPPKKXVWGXEKXKGGXPPPXXKXXFFFXXXXXXXXXXXX 777
G PP PP G G P PPP G GG PPP
Sbjct: 711 GGPPPPP--GLPPITGGPPPPPPPG---GLPPITGGPPPPPPPGGL-------------- 751
Query: 778 XXXXXXGXXXXXXPPFFFFXPPXXPXPPXPXXXFFFXPPPPPP 906
G PP PP P PP P PPPPPP
Sbjct: 752 --PPISGGPPPPPPPPGGCPPP--PPPPPPGGFKGGPPPPPPP 790
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +2
Query: 596 GGXPPXPPXGGGGXXXGXPKXPPQKNXCGGXKXKRGGXPPPXQXP 730
GG PP PP GG G P PP GG PPP P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPP---------PPPGGCPPPPPPP 775
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -3
Query: 714 GGXPPLXXXXXXXXXFWGGXXGXPXXXPPPPXGGXGGXPP 595
GG PP+ GG P PPPP GG G PP
Sbjct: 749 GGLPPISGGPPPPPPPPGGC---PPPPPPPPPGGFKGGPP 785
Score = 23.4 bits (48), Expect(2) = 9.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 1186 PXPPPPPP 1209
P PPPPPP
Sbjct: 758 PPPPPPPP 765
Score = 23.4 bits (48), Expect(2) = 9.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 1186 PXPPPPPP 1209
P PPPPPP
Sbjct: 769 PPPPPPPP 776
Score = 23.4 bits (48), Expect(2) = 9.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 1192 PPPPPPXP 1215
PPPPPP P
Sbjct: 769 PPPPPPPP 776
Score = 23.4 bits (48), Expect(2) = 9.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 1192 PPPPPPXP 1215
PPPPPP P
Sbjct: 770 PPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.7 bits (81), Expect = 0.037
Identities = 18/41 (43%), Positives = 18/41 (43%)
Frame = +1
Query: 595 GGXPPXPPXXGGGXXVGXPXXPPPKKXVWGXEKXKGGXPPP 717
GG PP PP G G P PPP G GG PPP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPP---GGLPPISGGPPPP 761
Score = 33.1 bits (72), Expect = 0.46
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 592 PGGXPPXPPXXGGGXXVGXPXXPPP 666
PGG PP PP G G P PPP
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 32.3 bits (70), Expect = 0.80
Identities = 32/103 (31%), Positives = 32/103 (31%)
Frame = +1
Query: 598 GXPPXPPXXGGGXXVGXPXXPPPKKXVWGXEKXKGGXPPPXXKXXFFFXXXXXXXXXXXX 777
G PP PP G G P PPP G GG PPP
Sbjct: 711 GGPPPPP--GLPPITGGPPPPPPPG---GLPPITGGPPPPPPPGGL-------------- 751
Query: 778 XXXXXXGXXXXXXPPFFFFXPPXXPXPPXPXXXFFFXPPPPPP 906
G PP PP P PP P PPPPPP
Sbjct: 752 --PPISGGPPPPPPPPGGCPPP--PPPPPPGGFKGGPPPPPPP 790
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +2
Query: 596 GGXPPXPPXGGGGXXXGXPKXPPQKNXCGGXKXKRGGXPPPXQXP 730
GG PP PP GG G P PP GG PPP P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPP---------PPPGGCPPPPPPP 775
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -3
Query: 714 GGXPPLXXXXXXXXXFWGGXXGXPXXXPPPPXGGXGGXPP 595
GG PP+ GG P PPPP GG G PP
Sbjct: 749 GGLPPISGGPPPPPPPPGGC---PPPPPPPPPGGFKGGPP 785
Score = 23.4 bits (48), Expect(2) = 9.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 1186 PXPPPPPP 1209
P PPPPPP
Sbjct: 758 PPPPPPPP 765
Score = 23.4 bits (48), Expect(2) = 9.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 1186 PXPPPPPP 1209
P PPPPPP
Sbjct: 769 PPPPPPPP 776
Score = 23.4 bits (48), Expect(2) = 9.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 1192 PPPPPPXP 1215
PPPPPP P
Sbjct: 769 PPPPPPPP 776
Score = 23.4 bits (48), Expect(2) = 9.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 1192 PPPPPPXP 1215
PPPPPP P
Sbjct: 770 PPPPPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.7 bits (81), Expect = 0.037
Identities = 18/41 (43%), Positives = 18/41 (43%)
Frame = +1
Query: 595 GGXPPXPPXXGGGXXVGXPXXPPPKKXVWGXEKXKGGXPPP 717
GG PP PP G G P PPP G GG PPP
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPP---GGLPPISGGPPPP 344
Score = 33.1 bits (72), Expect = 0.46
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 592 PGGXPPXPPXXGGGXXVGXPXXPPP 666
PGG PP PP G G P PPP
Sbjct: 348 PGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 32.3 bits (70), Expect = 0.80
Identities = 32/103 (31%), Positives = 32/103 (31%)
Frame = +1
Query: 598 GXPPXPPXXGGGXXVGXPXXPPPKKXVWGXEKXKGGXPPPXXKXXFFFXXXXXXXXXXXX 777
G PP PP G G P PPP G GG PPP
Sbjct: 294 GGPPPPP--GLPPITGGPPPPPPPG---GLPPITGGPPPPPPPGGL-------------- 334
Query: 778 XXXXXXGXXXXXXPPFFFFXPPXXPXPPXPXXXFFFXPPPPPP 906
G PP PP P PP P PPPPPP
Sbjct: 335 --PPISGGPPPPPPPPGGCPPP--PPPPPPGGFKGGPPPPPPP 373
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +2
Query: 596 GGXPPXPPXGGGGXXXGXPKXPPQKNXCGGXKXKRGGXPPPXQXP 730
GG PP PP GG G P PP GG PPP P
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPP---------PPPGGCPPPPPPP 358
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -3
Query: 714 GGXPPLXXXXXXXXXFWGGXXGXPXXXPPPPXGGXGGXPP 595
GG PP+ GG P PPPP GG G PP
Sbjct: 332 GGLPPISGGPPPPPPPPGGC---PPPPPPPPPGGFKGGPP 368
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.5 bits (73), Expect = 0.35
Identities = 23/65 (35%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = -3
Query: 792 FFFXKKKXXGGGGGAXXKKKXGFXXGGG-XPPLXXXXXXXXXFWGGXXGXPXXXPPP-PX 619
F F GGGGG G GGG PP GG G PPP P
Sbjct: 20 FLFPSAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPC 79
Query: 618 GGXGG 604
GG G
Sbjct: 80 GGGCG 84
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.5 bits (73), Expect = 0.35
Identities = 23/65 (35%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = -3
Query: 792 FFFXKKKXXGGGGGAXXKKKXGFXXGGG-XPPLXXXXXXXXXFWGGXXGXPXXXPPP-PX 619
F F GGGGG G GGG PP GG G PPP P
Sbjct: 20 FLFPSAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPC 79
Query: 618 GGXGG 604
GG G
Sbjct: 80 GGGCG 84
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 33.5 bits (73), Expect = 0.35
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 817 PPFFFFXPPXXPXPPXPXXXFFFXPPPPP 903
PP F PP P PP P PPPPP
Sbjct: 52 PPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +1
Query: 817 PPFFFFXPPXXPXPPXPXXXFFFXPPPP--PP 906
PP PP P PP P F PPPP PP
Sbjct: 33 PPPPMCAPPPLPCPPPPICPPQFCPPPPMCPP 64
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 31.1 bits (67), Expect(2) = 0.45
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 6/46 (13%)
Frame = +1
Query: 598 GXPPXPPXXGGGXXVGXPXXPPP------KKXVWGXEKXKGGXPPP 717
G P PP G G P PPP K V G + GG PPP
Sbjct: 534 GAPTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPP 579
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 5/50 (10%)
Frame = +2
Query: 596 GGXPPXPPXGGGGXXXGXPKXPP-----QKNXCGGXKXKRGGXPPPXQXP 730
G P PP G G P PP K G K GG PPP P
Sbjct: 534 GAPTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPP 583
Score = 25.0 bits (52), Expect(2) = 3.6
Identities = 11/35 (31%), Positives = 11/35 (31%)
Frame = +1
Query: 1192 PPPPPPXPXXXXXXXXXXXXXXXXXXXRPXXPPXP 1296
PPPPPP P P PP P
Sbjct: 551 PPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPPP 585
Score = 23.4 bits (48), Expect(2) = 3.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 1186 PXPPPPPP 1209
P PPPPPP
Sbjct: 536 PTPPPPPP 543
Score = 20.6 bits (41), Expect(2) = 0.45
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +1
Query: 838 PPXXPXPPXPXXXF 879
PP P PP P F
Sbjct: 576 PPPPPPPPPPSFMF 589
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 7.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 841 PXXPXPPXPXXXFFFXPPPPPP 906
P P PP P PPPPPP
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPP 582
Score = 28.7 bits (61), Expect = 9.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 850 PXPPXPXXXFFFXPPPPPP 906
P PP P PPPPPP
Sbjct: 576 PPPPPPPPPMLGGPPPPPP 594
Score = 26.2 bits (55), Expect(2) = 0.58
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 838 PPXXPXPPXPXXXFFFXPPPPPP 906
PP P PP P PPPPPP
Sbjct: 576 PP--PPPPPPPMLGGPPPPPPPP 596
Score = 25.0 bits (52), Expect(2) = 0.58
Identities = 13/40 (32%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Frame = +1
Query: 604 PPXPPXXG--GGXXVGXPXXPPPKKXVWGXEKXKGGXPPP 717
PP PP G P PPP + + G PPP
Sbjct: 542 PPPPPIAGLLAANGTNVPIPPPPPPPL--PQNLSGAPPPP 579
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 32.7 bits (71), Expect = 0.61
Identities = 27/79 (34%), Positives = 28/79 (35%), Gaps = 3/79 (3%)
Frame = +2
Query: 497 GGEKNPPXXGTXPFFXKKXGK-SXXXXXXXNFXRGGXPPXPPXG-GGGXXXGXPKXPPQK 670
GG PP G PF G + GG P PP G GG G PP
Sbjct: 128 GGPGGPPPFGQ-PFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGH 186
Query: 671 NXCGGXKXKRG-GXPPPXQ 724
GG G G PPP Q
Sbjct: 187 GGQGGPPGHGGMGGPPPGQ 205
Score = 31.9 bits (69), Expect = 1.1
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Frame = -1
Query: 716 GGGXP---PFXFSXPHTXFFGGGXXGXPTXXPPPXXGGXGGXPPGKNXXXG 573
GGG P P P GG G PP GG GG PPG+ G
Sbjct: 160 GGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGG 210
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 32.7 bits (71), Expect = 0.61
Identities = 27/79 (34%), Positives = 28/79 (35%), Gaps = 3/79 (3%)
Frame = +2
Query: 497 GGEKNPPXXGTXPFFXKKXGK-SXXXXXXXNFXRGGXPPXPPXG-GGGXXXGXPKXPPQK 670
GG PP G PF G + GG P PP G GG G PP
Sbjct: 408 GGPGGPPPFGQ-PFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGH 466
Query: 671 NXCGGXKXKRG-GXPPPXQ 724
GG G G PPP Q
Sbjct: 467 GGQGGPPGHGGMGGPPPGQ 485
Score = 31.9 bits (69), Expect = 1.1
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Frame = -1
Query: 716 GGGXP---PFXFSXPHTXFFGGGXXGXPTXXPPPXXGGXGGXPPGKNXXXG 573
GGG P P P GG G PP GG GG PPG+ G
Sbjct: 440 GGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGG 490
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 32.7 bits (71), Expect = 0.61
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 838 PPXXPXPPXPXXXFFFXPPPPPPXXXQXK 924
PP P PP P PPPPPP K
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPPPPPPPTMSK 1367
Score = 31.5 bits (68), Expect = 1.4
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +2
Query: 596 GGXPPXPPXGGGGXXXGXPKXPPQKNXCGGXKXKRGGXPPPXQXP 730
GG PP P GG G P P + C G GG PP P
Sbjct: 1557 GGLPP--PHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMP 1599
Score = 29.1 bits (62), Expect = 7.5
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 838 PPXXPXPPXPXXXFFFXPPPPPP 906
PP P PP P PPPPP
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPP 1360
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 31.9 bits (69), Expect = 1.1
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +2
Query: 584 NFXRGGXPPXPPXGGGGXXXGXPKXPPQKNXCGGXKXKRGGXPPPXQXP 730
N R PP P G G P PP + G +R G PPP P
Sbjct: 496 NNNRNNGPP-PRNNGNNNGNGRPMKPPSSS--GSGSNRRSGPPPPPPPP 541
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 31.5 bits (68), Expect = 1.4
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 625 GGGXXVGXPXXPPPKKXVWGXEKXKGGXPPP 717
GG VG P PPP + + +GG PPP
Sbjct: 762 GGPVGVGVPPPPPPPSAIPLPPRLQGGIPPP 792
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 31.5 bits (68), Expect = 1.4
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 625 GGGXXVGXPXXPPPKKXVWGXEKXKGGXPPP 717
GG VG P PPP + + +GG PPP
Sbjct: 762 GGPVGVGVPPPPPPPSAIPLPPRLQGGIPPP 792
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical protein
C33B4.3b protein.
Length = 993
Score = 31.1 bits (67), Expect = 1.8
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +1
Query: 1186 PXPPPPPPXPXXXXXXXXXXXXXXXXXXXRPXXPPXPPL 1302
P PPPPPP P P PP PP+
Sbjct: 765 PPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPI 803
Score = 29.5 bits (63), Expect = 5.6
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +1
Query: 817 PPFFFFXPPXXPXPPXPXXXFFFXPPPPPP 906
PP PP P PP P PPPPPP
Sbjct: 787 PPSTSSVPP--PPPPLPPISSGAPPPPPPP 814
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical protein
C33B4.3a protein.
Length = 1110
Score = 31.1 bits (67), Expect = 1.8
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +1
Query: 1186 PXPPPPPPXPXXXXXXXXXXXXXXXXXXXRPXXPPXPPL 1302
P PPPPPP P P PP PP+
Sbjct: 765 PPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPI 803
Score = 29.5 bits (63), Expect = 5.6
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +1
Query: 817 PPFFFFXPPXXPXPPXPXXXFFFXPPPPPP 906
PP PP P PP P PPPPPP
Sbjct: 787 PPSTSSVPP--PPPPLPPISSGAPPPPPPP 814
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 592 PGGXPPXPPXXGGGXXVGXPXXPPPKKXVWGXEKXKGGXPPP 717
PGG PP PP G G P PP + G PPP
Sbjct: 80 PGGIPPPPPMFAG----GIPPPPPMMGGIPPPPPMFGAPPPP 117
>Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical
protein T07C4.9b protein.
Length = 455
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -1
Query: 743 QKKKXXFXXGGGXPPFXFSXPHTXFFGGGXXGXPTXXPPPXXGGXGGXP 597
Q ++ + GGG PP+ S + GGG G P P GG GG P
Sbjct: 36 QPQQQPYPGGGGQPPYPGSNSNQ---GGG--GYPGQGGAPYPGGSGGYP 79
>Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical
protein T07C4.9a protein.
Length = 497
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -1
Query: 743 QKKKXXFXXGGGXPPFXFSXPHTXFFGGGXXGXPTXXPPPXXGGXGGXP 597
Q ++ + GGG PP+ S + GGG G P P GG GG P
Sbjct: 78 QPQQQPYPGGGGQPPYPGSNSNQ---GGG--GYPGQGGAPYPGGSGGYP 121
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 596 GGXPPXPPXGGGGXXXGXPKXPPQ 667
GG PP P GGGG P PP+
Sbjct: 624 GGGPPRGPGGGGGGGPTGPPAPPK 647
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 596 GGXPPXPPXGGGGXXXGXPKXPPQ 667
GG PP P GGGG P PP+
Sbjct: 624 GGGPPRGPGGGGGGGPTGPPAPPK 647
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +2
Query: 623 GGGGXXXGXPKXPPQKNXCGGXKXKRGGXPPPXQXP 730
GGGG P PP CGG GG Q P
Sbjct: 23 GGGGGCCAPPPPPPCGGGCGGGAPAAGGYAVAPQAP 58
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 30.3 bits (65), Expect = 3.2
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 832 FXPPXXPXPPXPXXXFFFXPPPPP 903
+ PP PP P ++ PPPPP
Sbjct: 87 YPPPHGLGPPPPPPHYYTQPPPPP 110
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +1
Query: 823 FFFFXPPXXPXP-PXPXXXFFFXPPPPPP 906
FFF PP P P P P PPPPPP
Sbjct: 148 FFFDQPPPTPIPTPVP----ILEPPPPPP 172
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 30.3 bits (65), Expect = 3.2
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 617 PXGGGGXXXGXPKXPPQKNXCGGXKXKRGGXPPPXQXP 730
P GGGG P PP CGG PP P
Sbjct: 20 PSGGGGGCGCAPPPPPPACGCGGGGGGYAAPPPAYAAP 57
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.5 bits (63), Expect = 5.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 838 PPXXPXPPXPXXXFFFXPPPPPPXXXQ 918
PP P PP PPPPPP Q
Sbjct: 490 PPPPPLPPIATPSSVPPPPPPPPALEQ 516
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 29.5 bits (63), Expect = 5.6
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +2
Query: 617 PXGGGGXXXGXPKXPPQKNXCGGXKXKRGGXPPPXQXPXF 736
P GGGG P PP CGG PP Q P F
Sbjct: 20 PSGGGGGCGCAPPPPPPPCGCGGPSL------PPLQLPRF 53
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 5.6
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +1
Query: 817 PPFFFFXPPXXPXPPXPXXXFFFXPPPPPP 906
P F PP P PP P PPPPPP
Sbjct: 61 PAQFCPPPPICPPPPPPPMP---CPPPPPP 87
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 29.5 bits (63), Expect = 5.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 850 PXPPXPXXXFFFXPPPPPP 906
P PP P +FF PPP P
Sbjct: 322 PNPPPPSAGYFFQAPPPAP 340
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.1 bits (62), Expect = 7.5
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 838 PPXXPXPPXPXXXFFFXPPPPPP 906
PP P PP P + PPPPPP
Sbjct: 39 PP--PPPPPPCGGGYEAPPPPPP 59
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.1 bits (62), Expect = 7.5
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 614 PPXGGGGXXXGXPKXPPQKNXCGGXKXKRGGXPPPXQXP 730
P GGGG P PP CGG PP P
Sbjct: 20 PSGGGGGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSLP 58
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 29.1 bits (62), Expect = 7.5
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +1
Query: 820 PFFFFXPPXXPXPPXPXXXFFFXPPPPPPXXXQ 918
P + PP P PP P PPPPPP Q
Sbjct: 128 PQYIEAPPPPPSPPPP-------PPPPPPQLQQ 153
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.1 bits (62), Expect = 7.5
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 817 PPFFFFXPPXXPXPPXPXXXFFFXPPPPP 903
PPF FF PP P P F PPP
Sbjct: 291 PPFGFFPPPPRGHFPPPPPHFMGRGMPPP 319
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.1 bits (62), Expect = 7.5
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 817 PPFFFFXPPXXPXPPXPXXXFFFXPPPPP 903
PPF FF PP P P F PPP
Sbjct: 291 PPFGFFPPPPRGHFPPPPPHFMGRGMPPP 319
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 28.7 bits (61), Expect = 9.9
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +1
Query: 817 PPFFFFXPPXXPXPPXPXXXFFFXPPPPPP 906
PPFF P P PP P PPPPPP
Sbjct: 778 PPFFAL--PVPPPPPVP-------PPPPPP 798
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 9.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 838 PPXXPXPPXPXXXFFFXPPPPPP 906
PP P PP PPPPPP
Sbjct: 497 PPPPPLPPIATPSSVPPPPPPPP 519
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,955,653
Number of Sequences: 27780
Number of extensions: 349044
Number of successful extensions: 5583
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3960
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3767217436
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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