Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_P20
(878 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 37 0.003
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.018
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 34 0.023
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.054
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.071
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.094
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.16
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 31 0.29
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 29 1.2
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 29 1.2
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 2.7
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 27 3.5
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 4.7
SPAC27F1.07 |||dolichyl-diphospho-oligosaccharide-protein glycos... 26 6.1
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 26 8.1
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 37.1 bits (82), Expect = 0.003
Identities = 23/60 (38%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Frame = -1
Query: 866 GXXGGXGXEKKXXGXAXGGGXXXXGGXGGXXXGPXG-GGXXXXRXGGGGGXVFWXGXXGG 690
G GG G G GG GG GG GP G GG GG GG G GG
Sbjct: 211 GGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 27.1 bits (57), Expect = 3.5
Identities = 27/99 (27%), Positives = 28/99 (28%)
Frame = -3
Query: 834 GXGXRGXGGXXGXGGXXGGXXGXXGGGXXXXEKXGGGGXXVLXXXGXGGXKXXGXXXVXK 655
G G G GG G GGG G GG G G G
Sbjct: 170 GLASHALGNLFHHRGHNGGGFGGFGGGSGGPPP-GPGGFGGFGGFGGEGHHHGGHGGFGG 228
Query: 654 KRXGXGXVXGGGGXTPPXXXFLVGGXXXPPXKGXXGPPG 538
G GG G P +GG P G G PG
Sbjct: 229 GPGGFEGGPGGFGGGPGGFGGGLGGFGGGPG-GFGGGPG 266
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.7 bits (76), Expect = 0.018
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +2
Query: 698 PXXXKTXXPPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXPSSXXP 850
P PPPP S PPP P P PP PP P PS P
Sbjct: 1699 PPQMSAPTPPPPPMSVP--PPPSAPPMPAG-PPSAPPPPLPASSAPSVPNP 1746
Score = 29.1 bits (62), Expect = 0.87
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 757 PPXGPXXXPPXPPXXXXPPPXAXPXXFFSXPXPP 858
PP PP PP PPP A P PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 3/47 (6%)
Frame = +2
Query: 725 PPPXFSFXFXPPPXXPXXPP---XXPPXPXXPPXPRXPXPSSXXPXP 856
PP P P PP PP P PP P P + P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +3
Query: 690 PPXXXXPKHXXPPPPXSXXXXPPPP 764
PP P PP P PPPP
Sbjct: 1710 PPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 34.3 bits (75), Expect = 0.023
Identities = 22/61 (36%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Frame = -1
Query: 866 GXXGGXGXEKKXXGXAXGGGXXXXGGXGGXXXGPXGG--GXXXXRXGGGGGXVFWXGXXG 693
G GG G + G GG GG GG G GG G R G GG G G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Query: 692 G 690
G
Sbjct: 66 G 66
Score = 29.1 bits (62), Expect = 0.87
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = -3
Query: 867 GXXXGXGXXEEGXGXRGXGGXXGXGGXXGGXXGXXGGGXXXXEKXGGGGXXVL 709
G G G G G GG G G GG G GG GG ++
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAKVII 75
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.1 bits (72), Expect = 0.054
Identities = 24/86 (27%), Positives = 26/86 (30%), Gaps = 5/86 (5%)
Frame = +1
Query: 616 PPPPXNXXXPXPFFXNXXXXXXLSXPPXXPXQNTXXXXXXFLXXXXPPPXGPXXXPPXPP 795
PPPP P N L PP P N PP G PP PP
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPL-------PPQGRSAPPPPPP 366
Query: 796 -----XXXXPPPXAXPXXFFSXPXPP 858
PPP + + P PP
Sbjct: 367 RSAPSTGRQPPPLSSSRAVSNPPAPP 392
Score = 31.5 bits (68), Expect = 0.16
Identities = 19/71 (26%), Positives = 21/71 (29%), Gaps = 2/71 (2%)
Frame = +2
Query: 662 TXXXPXXFXPPXPXXXKTXXPP--PPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXP 835
T P P P PP PP P P P PP P P P
Sbjct: 412 TSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Query: 836 SSXXPXPXXXP 868
++ P P P
Sbjct: 472 AAPAPPPAPAP 482
Score = 31.1 bits (67), Expect = 0.22
Identities = 17/56 (30%), Positives = 19/56 (33%)
Frame = +2
Query: 674 PXXFXPPXPXXXKTXXPPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXPSS 841
P P P P PP P P PP P P PP P P P++
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP-APAPAA 486
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +2
Query: 689 PPXPXXXKTXXPPPPXFSFXFXPPPXXPXXPPXXPPXPXXP 811
PP P P P PP P PP P P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +2
Query: 761 PXXPXXPPXXPPXPXXPPXPRXPXPSSXXPXPXXXP 868
P PP P P P R P S+ P P P
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPP 259
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.7 bits (71), Expect = 0.071
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +2
Query: 722 PPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXPSSXXPXPXXXP 868
PPPP P P PP P PP P P + P P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 31.1 bits (67), Expect = 0.22
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +2
Query: 674 PXXFXPPXPXXXKTXXPPPPXFSFXFXPPPXXPXXPPXXPPXPXXPP 814
P P P PPP PPP P PP P PP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.5 bits (63), Expect = 0.66
Identities = 16/53 (30%), Positives = 17/53 (32%), Gaps = 4/53 (7%)
Frame = +2
Query: 692 PXPXXXKTXXPPPPXFSFXFXPPPXXPXXPPXXPPXP----XXPPXPRXPXPS 838
P P P P PP PP PP P PP P P P+
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 29.1 bits (62), Expect = 0.87
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +2
Query: 674 PXXFXPPXPXXXKTXXPPPPXFSFXFXPPPXXPXXP 781
P PP P PPPP PPP P P
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 3.5
Identities = 17/61 (27%), Positives = 18/61 (29%)
Frame = +1
Query: 685 SXPPXXPXQNTXXXXXXFLXXXXPPPXGPXXXPPXPPXXXXPPPXAXPXXFFSXPXPPXX 864
S P P + L PPP P P P P P P P PP
Sbjct: 709 SPSPLLPDVSDTVEEQQKLLLKSPPPPPPAVIVPTPAPAPIPVP--PPAPIMGGPPPPPP 766
Query: 865 P 867
P
Sbjct: 767 P 767
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 558 PFXGGXXXPPPKKXXXGXXXPPP 626
P GG PPP G PPP
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPP 778
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.3 bits (70), Expect = 0.094
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +2
Query: 722 PPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXPSSXXPXPXXXP 868
P PP PP P P PP P P P PS P P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAP----PIPSKAPPIPSSLP 172
Score = 29.1 bits (62), Expect = 0.87
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +2
Query: 689 PPXPXXXKTXXPPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXP 820
PP P + PPP + PP P P PP P P P
Sbjct: 165 PPIP----SSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/64 (28%), Positives = 20/64 (31%), Gaps = 4/64 (6%)
Frame = +2
Query: 689 PPXPXXXKTXXPPPPXFSFXFXPPPXXPXX----PPXXPPXPXXPPXPRXPXPSSXXPXP 856
PP + PPP S P P PP P P P PS+ P P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Query: 857 XXXP 868
P
Sbjct: 199 PKVP 202
Score = 27.9 bits (59), Expect = 2.0
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = +2
Query: 689 PPXPXXXKTXXPPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXPSSXXPXP 856
PP P P PPP P P PP P P P P P
Sbjct: 151 PPSPASAPPIPSKAPPIPSSL-PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +2
Query: 689 PPXPXXXKTXXPPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXPSSXXPXPXXXP 868
PP P PP P S P P P PP PP P+ P P P
Sbjct: 1159 PPVPKP-SVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 30.3 bits (65), Expect = 0.38
Identities = 20/61 (32%), Positives = 21/61 (34%)
Frame = +2
Query: 674 PXXFXPPXPXXXKTXXPPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXPSSXXPX 853
P PP P + PP P S P P PP P PP P PS P
Sbjct: 1107 PSVAVPPVPAP--SGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP---VPAPSGAPPV 1161
Query: 854 P 856
P
Sbjct: 1162 P 1162
Score = 30.3 bits (65), Expect = 0.38
Identities = 19/61 (31%), Positives = 22/61 (36%)
Frame = +2
Query: 674 PXXFXPPXPXXXKTXXPPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXPSSXXPX 853
P PP P + PP P + P P PP P PP P PS+ P
Sbjct: 1164 PSVAAPPVP-APSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP---VPPPSTAPPV 1219
Query: 854 P 856
P
Sbjct: 1220 P 1220
Score = 30.3 bits (65), Expect = 0.38
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = +2
Query: 674 PXXFXPPXPXXXKTXXPPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXPSSXXPX 853
P PP P + PP P S P P PP P PP P + P
Sbjct: 1184 PAAGVPPVPPPSEA--PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPA 1241
Query: 854 P 856
P
Sbjct: 1242 P 1242
Score = 29.5 bits (63), Expect = 0.66
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +2
Query: 689 PPXPXXXKTXXPPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXPSSXXPXP 856
PP P T P P S PP P P P P P PS P P
Sbjct: 1041 PPVPIPTSTP-PVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVP 1095
Score = 29.5 bits (63), Expect = 0.66
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = +2
Query: 674 PXXFXPPXPXXXKTXXPPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXPSSXXP 850
P PP P + PP P S P P PP P PP P PSS P
Sbjct: 1126 PSVAAPPVPVP--SGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP---VPAPSSGIP 1179
Score = 29.1 bits (62), Expect = 0.87
Identities = 17/60 (28%), Positives = 20/60 (33%)
Frame = +2
Query: 689 PPXPXXXKTXXPPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXPSSXXPXPXXXP 868
PP P + PP P S P P P P PP P+ + P P P
Sbjct: 1083 PPVPAP--SGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP 1140
Score = 28.3 bits (60), Expect = 1.5
Identities = 19/65 (29%), Positives = 22/65 (33%)
Frame = +2
Query: 674 PXXFXPPXPXXXKTXXPPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXPSSXXPX 853
P PP P + PP P S PP P P P PP P+ + P
Sbjct: 1007 PLARVPPVPKL-SSKAPPVPLPSAD-APPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPP 1064
Query: 854 PXXXP 868
P P
Sbjct: 1065 PVPAP 1069
Score = 26.6 bits (56), Expect = 4.7
Identities = 20/62 (32%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Frame = +2
Query: 674 PXXFXPPXPXXXKTXXPPPPXFSFXFXP-PPXXPXXPPXXPPXPXXPPXPRXPXPSSXXP 850
P PP P + PP P S P P PP P PP P PS P
Sbjct: 1145 PSVAAPPVP--APSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP---VPPPSEAPP 1199
Query: 851 XP 856
P
Sbjct: 1200 VP 1201
Score = 26.6 bits (56), Expect = 4.7
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +2
Query: 674 PXXFXPPXPXXXKTXXPPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXPSSXXP 850
P PP P P PP P P PP P P P PS+ P
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPP-----SEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP 1227
Score = 26.2 bits (55), Expect = 6.1
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = +2
Query: 674 PXXFXPPXPXXXKTXXPPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXPSSXXPX 853
P PP P PP P S P P P P PP P+ + P
Sbjct: 1097 PSVAAPPVPKP-SVAVPPVPAPS-GAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPA 1154
Query: 854 PXXXP 868
P P
Sbjct: 1155 PSGAP 1159
Score = 26.2 bits (55), Expect = 6.1
Identities = 17/60 (28%), Positives = 18/60 (30%)
Frame = +2
Query: 689 PPXPXXXKTXXPPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXPSSXXPXPXXXP 868
PP P PP P S P PP P PP P+ P P P
Sbjct: 1140 PPVPKP-SVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP 1198
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 30.7 bits (66), Expect = 0.29
Identities = 20/69 (28%), Positives = 20/69 (28%), Gaps = 2/69 (2%)
Frame = +2
Query: 656 FXTXXXPXXFXPPXPXXXKTXX--PPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXP 829
F P PP P K PPPP P P P P PP P
Sbjct: 197 FPAHHEPGEHMPPPPMHHKPGEHMPPPP---MHHEPGEHMPPPPMHHEPGEHMPPPPMHH 253
Query: 830 XPSSXXPXP 856
P P P
Sbjct: 254 EPGEHMPPP 262
Score = 30.3 bits (65), Expect = 0.38
Identities = 25/87 (28%), Positives = 25/87 (28%), Gaps = 12/87 (13%)
Frame = +3
Query: 540 PGAXXPP-----FXGGXXXPPPKKXXXGXXXPPPXKXXXPXXFFSQPXXXLXSF----XP 692
PG PP G PPP G PPP P P P
Sbjct: 242 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 301
Query: 693 PXXXXPKHXXPPPP---XSXXXXPPPP 764
P P PPPP PPPP
Sbjct: 302 PMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 29.9 bits (64), Expect = 0.50
Identities = 21/73 (28%), Positives = 21/73 (28%), Gaps = 7/73 (9%)
Frame = +3
Query: 567 GGXXXPPPKKXXXGXXXPPPXKXXXPXXFFSQPXXXLXSF----XPPXXXXPKHXXPPPP 734
G PPP G PPP P P PP P PPPP
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Query: 735 ---XSXXXXPPPP 764
PPPP
Sbjct: 264 MHHEPGEHMPPPP 276
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/63 (28%), Positives = 19/63 (30%), Gaps = 2/63 (3%)
Frame = +2
Query: 674 PXXFXPPXPXXXKTXX--PPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXPSSXX 847
P PP P + PPPP P P P P PP P P
Sbjct: 216 PGEHMPPPPMHHEPGEHMPPPP---MHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHM 272
Query: 848 PXP 856
P P
Sbjct: 273 PPP 275
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/63 (28%), Positives = 19/63 (30%), Gaps = 2/63 (3%)
Frame = +2
Query: 674 PXXFXPPXPXXXKTXX--PPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXPSSXX 847
P PP P + PPPP P P P P PP P P
Sbjct: 229 PGEHMPPPPMHHEPGEHMPPPP---MHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHM 285
Query: 848 PXP 856
P P
Sbjct: 286 PPP 288
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/63 (28%), Positives = 19/63 (30%), Gaps = 2/63 (3%)
Frame = +2
Query: 674 PXXFXPPXPXXXKTXX--PPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXPSSXX 847
P PP P + PPPP P P P P PP P P
Sbjct: 242 PGEHMPPPPMHHEPGEHMPPPP---MHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHM 298
Query: 848 PXP 856
P P
Sbjct: 299 PPP 301
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/63 (28%), Positives = 19/63 (30%), Gaps = 2/63 (3%)
Frame = +2
Query: 674 PXXFXPPXPXXXKTXX--PPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXPSSXX 847
P PP P + PPPP P P P P PP P P
Sbjct: 255 PGEHMPPPPMHHEPGEHMPPPP---MHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHM 311
Query: 848 PXP 856
P P
Sbjct: 312 PPP 314
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/63 (28%), Positives = 19/63 (30%), Gaps = 2/63 (3%)
Frame = +2
Query: 674 PXXFXPPXPXXXKTXX--PPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXPSSXX 847
P PP P + PPPP P P P P PP P P
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPP---MHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHM 324
Query: 848 PXP 856
P P
Sbjct: 325 PPP 327
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/63 (28%), Positives = 19/63 (30%), Gaps = 2/63 (3%)
Frame = +2
Query: 674 PXXFXPPXPXXXKTXX--PPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXPSSXX 847
P PP P + PPPP P P P P PP P P
Sbjct: 281 PGEHMPPPPMHHEPGEHMPPPP---MHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHM 337
Query: 848 PXP 856
P P
Sbjct: 338 PPP 340
Score = 27.5 bits (58), Expect = 2.7
Identities = 21/74 (28%), Positives = 21/74 (28%), Gaps = 9/74 (12%)
Frame = +3
Query: 540 PGAXXPP-----FXGGXXXPPPKKXXXGXXXPPPXKXXXPXXFFSQPXXXLXSFX----P 692
PG PP G PPP G PPP P P P
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 327
Query: 693 PXXXXPKHXXPPPP 734
P P PPPP
Sbjct: 328 PMHHEPGEHMPPPP 341
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/51 (27%), Positives = 16/51 (31%)
Frame = +2
Query: 689 PPXPXXXKTXXPPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXPXPSS 841
P P + P P P P P P P PP P P P +
Sbjct: 99 PEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEPVPET 149
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +2
Query: 761 PXXPXXPPXXPPXPXXPPXPRXPXPSSXXPXPXXXP 868
P P P P P PP P P P P P
Sbjct: 107 PPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLP 142
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 28.7 bits (61), Expect = 1.2
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = -1
Query: 92 HRSQHDVSDSNIVCLQNLKEF 30
+R QHD+ +++ CL+N+K+F
Sbjct: 546 NRIQHDILENHFCCLKNVKDF 566
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -1
Query: 827 GXAXGGGXXXXGGXGGXXXGPXGGGXXXXRXGGGGG 720
G GG GG GG G GGG R G GGG
Sbjct: 141 GGFRGGRGGSRGGFGGNSRGGFGGG---SRGGFGGG 173
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 27.1 bits (57), Expect = 3.5
Identities = 16/59 (27%), Positives = 18/59 (30%)
Frame = +2
Query: 653 FFXTXXXPXXFXPPXPXXXKTXXPPPPXFSFXFXPPPXXPXXPPXXPPXPXXPPXPRXP 829
F+ P P T P P S + PPP P P PP P P
Sbjct: 73 FYPLTAPPPYTAEPEARYNSTIHNPMPPMSQAYRPPPTEPPTVPAYETSSEFPP-PAYP 130
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 779 PPXXPPXPXXPPXPRXPXPSSXXPXP 856
PP PP P PP P PS P P
Sbjct: 5 PPGNPPPP--PPPPGFEPPSQPPPPP 28
>SPAC27F1.07 |||dolichyl-diphospho-oligosaccharide-protein
glycosyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 450
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 427 PIYIFNSFYTKLHRFIHQLEKRACVNSKVSVT 332
P+ I NS TK+H+F+ L ++ ++VT
Sbjct: 376 PVEISNSNVTKIHKFLDTLGRQVFTYEALNVT 407
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/47 (27%), Positives = 14/47 (29%)
Frame = +2
Query: 644 PXLFFXTXXXPXXFXPPXPXXXKTXXPPPPXFSFXFXPPPXXPXXPP 784
P L+ P F P P P P F P P PP
Sbjct: 140 PPLYHPAATAPSEFMPSIPGFGNLPNPAMPPIPFLPFNPAAQPPFPP 186
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,629,789
Number of Sequences: 5004
Number of extensions: 47224
Number of successful extensions: 382
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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