Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_P17
(947 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC101847-1|AAI01848.1| 196|Homo sapiens peptidoglycan recogniti... 46 3e-04
BC101845-1|AAI01846.1| 196|Homo sapiens peptidoglycan recogniti... 46 3e-04
BC096157-1|AAH96157.1| 196|Homo sapiens peptidoglycan recogniti... 46 3e-04
BC096156-1|AAH96156.1| 196|Homo sapiens peptidoglycan recogniti... 46 3e-04
BC096155-1|AAH96155.1| 196|Homo sapiens peptidoglycan recogniti... 46 3e-04
BC096154-1|AAH96154.1| 196|Homo sapiens peptidoglycan recogniti... 46 3e-04
AY358936-1|AAQ89295.1| 196|Homo sapiens Granulocyte pep A protein. 46 3e-04
AF242517-1|AAF99598.1| 196|Homo sapiens hypothetical protein SB... 46 3e-04
AF076483-1|AAC31822.1| 196|Homo sapiens peptidoglycan recogniti... 46 3e-04
AC007785-2|AAD38243.1| 196|Homo sapiens peptidoglycan recogniti... 46 3e-04
BC003413-1|AAH03413.1| 217|Homo sapiens nucleolar protein famil... 31 6.1
AJ276003-1|CAB76563.1| 217|Homo sapiens GAR1 protein protein. 31 6.1
>BC101847-1|AAI01848.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 45.6 bits (103), Expect = 3e-04
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 142 TEIAADCD-VVSKKQWDGLIPVHVSYLARPVSLVIVQHTVTPFCRTDAGCXELXXNIRTN 318
TE A C +V + +W L +L+ P+ V+V HT C T A C + N++
Sbjct: 24 TEDPACCSPIVPRNEWKALASECAQHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHY 83
Query: 319 HIQALXYWDI 348
H++ L + D+
Sbjct: 84 HMKTLGWCDV 93
>BC101845-1|AAI01846.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 45.6 bits (103), Expect = 3e-04
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 142 TEIAADCD-VVSKKQWDGLIPVHVSYLARPVSLVIVQHTVTPFCRTDAGCXELXXNIRTN 318
TE A C +V + +W L +L+ P+ V+V HT C T A C + N++
Sbjct: 24 TEDPACCSPIVPRNEWKALASECAQHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHY 83
Query: 319 HIQALXYWDI 348
H++ L + D+
Sbjct: 84 HMKTLGWCDV 93
>BC096157-1|AAH96157.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 45.6 bits (103), Expect = 3e-04
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 142 TEIAADCD-VVSKKQWDGLIPVHVSYLARPVSLVIVQHTVTPFCRTDAGCXELXXNIRTN 318
TE A C +V + +W L +L+ P+ V+V HT C T A C + N++
Sbjct: 24 TEDPACCSPIVPRNEWKALASECAQHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHY 83
Query: 319 HIQALXYWDI 348
H++ L + D+
Sbjct: 84 HMKTLGWCDV 93
>BC096156-1|AAH96156.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 45.6 bits (103), Expect = 3e-04
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 142 TEIAADCD-VVSKKQWDGLIPVHVSYLARPVSLVIVQHTVTPFCRTDAGCXELXXNIRTN 318
TE A C +V + +W L +L+ P+ V+V HT C T A C + N++
Sbjct: 24 TEDPACCSPIVPRNEWKALASECAQHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHY 83
Query: 319 HIQALXYWDI 348
H++ L + D+
Sbjct: 84 HMKTLGWCDV 93
>BC096155-1|AAH96155.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 45.6 bits (103), Expect = 3e-04
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 142 TEIAADCD-VVSKKQWDGLIPVHVSYLARPVSLVIVQHTVTPFCRTDAGCXELXXNIRTN 318
TE A C +V + +W L +L+ P+ V+V HT C T A C + N++
Sbjct: 24 TEDPACCSPIVPRNEWKALASECAQHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHY 83
Query: 319 HIQALXYWDI 348
H++ L + D+
Sbjct: 84 HMKTLGWCDV 93
>BC096154-1|AAH96154.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 45.6 bits (103), Expect = 3e-04
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 142 TEIAADCD-VVSKKQWDGLIPVHVSYLARPVSLVIVQHTVTPFCRTDAGCXELXXNIRTN 318
TE A C +V + +W L +L+ P+ V+V HT C T A C + N++
Sbjct: 24 TEDPACCSPIVPRNEWKALASECAQHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHY 83
Query: 319 HIQALXYWDI 348
H++ L + D+
Sbjct: 84 HMKTLGWCDV 93
>AY358936-1|AAQ89295.1| 196|Homo sapiens Granulocyte pep A protein.
Length = 196
Score = 45.6 bits (103), Expect = 3e-04
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 142 TEIAADCD-VVSKKQWDGLIPVHVSYLARPVSLVIVQHTVTPFCRTDAGCXELXXNIRTN 318
TE A C +V + +W L +L+ P+ V+V HT C T A C + N++
Sbjct: 24 TEDPACCSPIVPRNEWKALASECAQHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHY 83
Query: 319 HIQALXYWDI 348
H++ L + D+
Sbjct: 84 HMKTLGWCDV 93
>AF242517-1|AAF99598.1| 196|Homo sapiens hypothetical protein
SBBI68 protein.
Length = 196
Score = 45.6 bits (103), Expect = 3e-04
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 142 TEIAADCD-VVSKKQWDGLIPVHVSYLARPVSLVIVQHTVTPFCRTDAGCXELXXNIRTN 318
TE A C +V + +W L +L+ P+ V+V HT C T A C + N++
Sbjct: 24 TEDPACCSPIVPRNEWKALASECAQHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHY 83
Query: 319 HIQALXYWDI 348
H++ L + D+
Sbjct: 84 HMKTLGWCDV 93
>AF076483-1|AAC31822.1| 196|Homo sapiens peptidoglycan recognition
protein precursor protein.
Length = 196
Score = 45.6 bits (103), Expect = 3e-04
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 142 TEIAADCD-VVSKKQWDGLIPVHVSYLARPVSLVIVQHTVTPFCRTDAGCXELXXNIRTN 318
TE A C +V + +W L +L+ P+ V+V HT C T A C + N++
Sbjct: 24 TEDPACCSPIVPRNEWKALASECAQHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHY 83
Query: 319 HIQALXYWDI 348
H++ L + D+
Sbjct: 84 HMKTLGWCDV 93
>AC007785-2|AAD38243.1| 196|Homo sapiens peptidoglycan recognition
protein precursor protein.
Length = 196
Score = 45.6 bits (103), Expect = 3e-04
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 142 TEIAADCD-VVSKKQWDGLIPVHVSYLARPVSLVIVQHTVTPFCRTDAGCXELXXNIRTN 318
TE A C +V + +W L +L+ P+ V+V HT C T A C + N++
Sbjct: 24 TEDPACCSPIVPRNEWKALASECAQHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHY 83
Query: 319 HIQALXYWDI 348
H++ L + D+
Sbjct: 84 HMKTLGWCDV 93
>BC003413-1|AAH03413.1| 217|Homo sapiens nucleolar protein family
A, member 1 (H/ACA small nucleolar RNPs) protein.
Length = 217
Score = 31.1 bits (67), Expect = 6.1
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Frame = -1
Query: 596 PRGXGXPPRGG---XXGGXRAXRARKGXXGXFXHWXXXGXGGXFKFXRXNG 453
P G PPRGG GG R R G G G GG F+ R G
Sbjct: 161 PPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGG 211
>AJ276003-1|CAB76563.1| 217|Homo sapiens GAR1 protein protein.
Length = 217
Score = 31.1 bits (67), Expect = 6.1
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Frame = -1
Query: 596 PRGXGXPPRGG---XXGGXRAXRARKGXXGXFXHWXXXGXGGXFKFXRXNG 453
P G PPRGG GG R R G G G GG F+ R G
Sbjct: 161 PPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGG 211
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,000,153
Number of Sequences: 237096
Number of extensions: 1618937
Number of successful extensions: 3733
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3720
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12492094950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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