Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_P15
         (879 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical pr...    31   1.1  
L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical pr...    30   1.9  
L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr...    30   2.5  
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase...    30   2.5  
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi...    30   2.5  
AF385631-1|AAK84832.1|  671|Caenorhabditis elegans serotonin reu...    29   4.4  
AC024812-6|AAF59549.2|  671|Caenorhabditis elegans Modulation of...    29   4.4  
Z99280-1|CAB16499.1|  225|Caenorhabditis elegans Hypothetical pr...    29   5.8  
AL110484-28|CAB54395.2|  419|Caenorhabditis elegans Hypothetical...    28   7.7  

>Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical
           protein AC3.4 protein.
          Length = 425

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
 Frame = +3

Query: 309 RCTRRGFQEVL*QECSTERLYQLGAAGRASLCRQRICEPHQ*CPKQYQSXSSTLCA---- 476
           +C +   Q+ + Q+   ++  Q       + C+Q + +  Q C  Q Q  S+  C     
Sbjct: 208 QCQQSCQQQCVQQQVPAQQCNQQCTQQCQTTCQQAVPQCQQQCAPQCQQPSAPQCQQCQN 267

Query: 477 TRTETGLLCSSRKAAPECFQQKTENLQTCFLNLKQS 584
           T  +   +C  ++ AP+C QQ     Q C  + +Q+
Sbjct: 268 TCQQAAPVCQ-QQCAPQCQQQSAPACQQCQTSCQQT 302


>Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical
           protein AC3.3 protein.
          Length = 425

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
 Frame = +3

Query: 309 RCTRRGFQEVL*QECSTERLYQLGAAGRASLCRQRICEPHQ*CPKQYQSXSSTLCA---- 476
           +C +   Q+ + Q+   ++  Q       + C+Q + +  Q C  Q Q  S+  C     
Sbjct: 208 QCQQSCQQQCVQQQVPAQQCNQQCTQQCQTTCQQAVPQCQQQCAPQCQQPSAPQCQQCQN 267

Query: 477 TRTETGLLCSSRKAAPECFQQKTENLQTCFLNLKQS 584
           T  +   +C  ++ AP+C QQ     Q C  + +Q+
Sbjct: 268 TCQQAAPVCQ-QQCAPQCQQQSAPACQQCQTSCQQT 302


>L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical
           protein ZC262.5 protein.
          Length = 54

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = +1

Query: 124 AAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRT 237
           AAG+    +SQI A V  QCTK  A  K P  +A L+T
Sbjct: 6   AAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41


>L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical
           protein R05D3.6 protein.
          Length = 54

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = +1

Query: 124 AAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRT 237
           AAG+    +SQI A V  QCTK  A  K P  +A L+T
Sbjct: 6   AAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41


>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical protein
            ZK1067.1 protein.
          Length = 1323

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -3

Query: 646  SSTLAHFSTRLKLLADSTVGKLCFKFKKHVWRFSVFCWK 530
            S T+      +K LA     K C+     VW F V CW+
Sbjct: 1041 SITIKSGKVAIKWLAIEIFSKHCYTHASDVWAFGVTCWE 1079


>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
            protein.
          Length = 1323

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -3

Query: 646  SSTLAHFSTRLKLLADSTVGKLCFKFKKHVWRFSVFCWK 530
            S T+      +K LA     K C+     VW F V CW+
Sbjct: 1041 SITIKSGKVAIKWLAIEIFSKHCYTHASDVWAFGVTCWE 1079


>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
            kinase protein.
          Length = 1374

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -3

Query: 646  SSTLAHFSTRLKLLADSTVGKLCFKFKKHVWRFSVFCWK 530
            S T+      +K LA     K C+     VW F V CW+
Sbjct: 1092 SITIKSGKVAIKWLAIEIFSKHCYTHASDVWAFGVTCWE 1130


>AF385631-1|AAK84832.1|  671|Caenorhabditis elegans serotonin
           reuptake transporter protein.
          Length = 671

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 562 HVWRFSVFCWKHSGAAF 512
           ++WRF   C+KH G AF
Sbjct: 122 NIWRFPSVCYKHGGGAF 138


>AC024812-6|AAF59549.2|  671|Caenorhabditis elegans Modulation of
           locomotion defectiveprotein 5 protein.
          Length = 671

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 562 HVWRFSVFCWKHSGAAF 512
           ++WRF   C+KH G AF
Sbjct: 122 NIWRFPSVCYKHGGGAF 138


>Z99280-1|CAB16499.1|  225|Caenorhabditis elegans Hypothetical
           protein Y57G11B.5 protein.
          Length = 225

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 21/90 (23%), Positives = 37/90 (41%)
 Frame = +1

Query: 94  MWKTVLITIFAAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRTFGNCLKGLVDLN 273
           M+K+++ +   A  +A   S +T  +        AED  P   A  R F  C K + + +
Sbjct: 1   MFKSLVFSALLAYAVAAPMSSMTTAIDRIDQIFQAEDSTPACNAETRRFNACFKDINEKS 60

Query: 274 VLKTEIEEAKPNGALDEVFKKYCDKSAQLK 363
            L+   ++     +  EV +   D    LK
Sbjct: 61  RLEM-FQDVTKFPSKSEVLESVADIRKALK 89


>AL110484-28|CAB54395.2|  419|Caenorhabditis elegans Hypothetical
           protein Y38E10A.4 protein.
          Length = 419

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +3

Query: 492 GLLCSSRKAAPECFQQKTENLQTCFLNLKQSFPTVE 599
           GL C+ + +A ECF          F N K  FP VE
Sbjct: 86  GLFCT-KSSAKECFWDDDSGSADQFQNFKSGFPLVE 120


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,819,272
Number of Sequences: 27780
Number of extensions: 365536
Number of successful extensions: 1099
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)