Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_P14
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0039 - 7621613-7622695                                           31   1.2  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           30   2.8  
11_06_0610 - 25449085-25453284                                         29   3.7  
07_01_0862 - 7172083-7172931                                           29   6.5  
07_01_0115 + 851505-852368,852611-852730,853000-853020,853253-85...    28   8.5  
03_02_0631 + 9969841-9969868,9969965-9970082,9970186-9970828,997...    28   8.5  

>05_03_0039 - 7621613-7622695
          Length = 360

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 21/79 (26%), Positives = 26/79 (32%)
 Frame = +1

Query: 493 PXPPPXXXXXPXFRLXKXXSPHPRGVXRFXTKXGXTPRKXPXTQXAPKGPXPXKXAGLPA 672
           P P P     P  +L     P P+       +    P+  P     PK P P K    P 
Sbjct: 220 PKPEPKPHPEPEPKLKPEPKPEPKPEPEPKPEPKPEPKPEPKPYPKPK-PEP-KPVPKPK 277

Query: 673 RFSHRXPPPLTXPSKKIXP 729
              H  P P   P  K+ P
Sbjct: 278 PIPHPGPKPKPKPDPKLEP 296


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 24/85 (28%), Positives = 26/85 (30%), Gaps = 4/85 (4%)
 Frame = +1

Query: 457 PPGKGXXXXGXXPXPPPXXXXXPXFRLXKXXSPHPRGVXRFXTKXGXTPRKXPXTQXAPK 636
           PPG G       P PPP     P        +P P          G  P   P    AP+
Sbjct: 309 PPGAGAGAGTGAPPPPPAHPAAP---APPPPAPSPSAA---GAGSGPPPPPPPAAPAAPR 362

Query: 637 ----GPXPXKXAGLPARFSHRXPPP 699
               GP P    G   R     PPP
Sbjct: 363 PPGPGPGPPPPPGAAGRGGGGPPPP 387


>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 24/90 (26%), Positives = 29/90 (32%), Gaps = 1/90 (1%)
 Frame = +1

Query: 499 PPPXXXXXPXFRLXKXXSPHPRGVXRFXTKXGXTPRKXPXTQXAPKGPXPXKXAGLPARF 678
           PPP     P         P P G      K G    + P T  +   P P      P+  
Sbjct: 549 PPPEGKSPPTPTASHSPPPVPEGHTPSPPKSGPPAGESPPTPESKASPPPTPEEYTPS-- 606

Query: 679 SHRXPPPLTXPSKKIXP-PTXXGXXXPPXA 765
               PP  T P++K  P P       PP A
Sbjct: 607 ----PPKSTPPAEKSPPTPESKASSPPPPA 632



 Score = 28.7 bits (61), Expect = 6.5
 Identities = 28/99 (28%), Positives = 34/99 (34%), Gaps = 7/99 (7%)
 Frame = +1

Query: 484 GXXPXPP---PXXXXXPXFRLXKXXSPHPRGVXRFXTKXGXTP---RKXPXTQXAPKGPX 645
           G  P PP   P     P     K  SP P       T  G TP   +  P T+ +P  P 
Sbjct: 635 GHTPSPPESTPPSEKSPPTPESKASSPPP------PTPEGHTPSPPKSTPPTEKSPPTPE 688

Query: 646 PXKXAGLP-ARFSHRXPPPLTXPSKKIXPPTXXGXXXPP 759
               +  P A   H   PP + P  +  PPT       P
Sbjct: 689 SESSSPPPPAPEGHMPSPPKSTPPVEKSPPTPESEASSP 727



 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/59 (25%), Positives = 19/59 (32%)
 Frame = +1

Query: 583 TKXGXTPRKXPXTQXAPKGPXPXKXAGLPARFSHRXPPPLTXPSKKIXPPTXXGXXXPP 759
           T  G  P +    +  P+ P P      P   +   PPP         PP   G   PP
Sbjct: 456 TSHGPPPPEEESPEEPPEEPTPSPTPSSPESPAKMAPPPAPAIKGVTSPPAEYGAPPPP 514


>07_01_0862 - 7172083-7172931
          Length = 282

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 25/99 (25%), Positives = 29/99 (29%), Gaps = 8/99 (8%)
 Frame = +1

Query: 460 PGKGXXXXGXXPXPPPXXXXXPXFRLXKXXSPHPRGVXRFXTKXGXTPRKXPXTQXAP-- 633
           P +        P PPP        +L     P P             PRK P     P  
Sbjct: 118 PSRRCVAPAPPPPPPPPPPTAEEKKLLLFPPPLPPRKKAMLFPLPLPPRKKPLLYPPPLP 177

Query: 634 ------KGPXPXKXAGLPARFSHRXPPPLTXPSKKIXPP 732
                   P P     LP + +   PP L  P KK  PP
Sbjct: 178 PKKKPLPPPSPPPQPPLPEKENTPLPPLLLPPKKKPLPP 216


>07_01_0115 +
           851505-852368,852611-852730,853000-853020,853253-853369,
           853466-853555,853730-853837,853897-853932,853933-854022
          Length = 481

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/46 (32%), Positives = 18/46 (39%)
 Frame = +1

Query: 619 TQXAPKGPXPXKXAGLPARFSHRXPPPLTXPSKKIXPPTXXGXXXP 756
           T  AP  P   K   + + F+     P T PS K  PPT      P
Sbjct: 181 TPTAPPPPTTTKKKSVKSLFNGLLSSPFTRPSPKQPPPTKPAAISP 226


>03_02_0631 +
           9969841-9969868,9969965-9970082,9970186-9970828,
           9971146-9971935,9972002-9972051,9972618-9972704
          Length = 571

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 17/44 (38%), Positives = 18/44 (40%)
 Frame = +1

Query: 601 PRKXPXTQXAPKGPXPXKXAGLPARFSHRXPPPLTXPSKKIXPP 732
           P K P  Q APK   P      P +     PPP   PSK   PP
Sbjct: 66  PEKPPPLQKAPKVSPPP-----PQKPDKVSPPPAQKPSKVSPPP 104


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,832,054
Number of Sequences: 37544
Number of extensions: 242379
Number of successful extensions: 685
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)