Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_P14
         (875 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    30   3.6  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    30   3.6  
X66270-1|CAA46985.1|  497|Drosophila melanogaster ems W13 protein.     30   4.8  
BT021310-1|AAX33458.1|  494|Drosophila melanogaster RE15812p pro...    30   4.8  
AE014297-1771|AAF54999.1|  494|Drosophila melanogaster CG2988-PA...    30   4.8  
AE014296-1088|AAF50683.1|  239|Drosophila melanogaster CG12330-P...    29   6.4  
X51653-1|CAA35965.1|  494|Drosophila melanogaster empty spiracle...    29   8.4  

>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 15/49 (30%), Positives = 18/49 (36%)
 Frame = +1

Query: 613 PXTQXAPKGPXPXKXAGLPARFSHRXPPPLTXPSKKIXPPTXXGXXXPP 759
           P  Q  P  P P   +  P +     PPP   PS    PP+      PP
Sbjct: 103 PPPQPTPSAPAPPPPSYGPPQTPPPRPPPQPTPSAPAPPPSYGPPQTPP 151



 Score = 29.5 bits (63), Expect = 6.4
 Identities = 28/103 (27%), Positives = 32/103 (31%), Gaps = 2/103 (1%)
 Frame = +1

Query: 457 PPGKGXXXX--GXXPXPPPXXXXXPXFRLXKXXSPHPRGVXRFXTKXGXTPRKXPXTQXA 630
           PPG G      G  P P P     P +   +   P P    +  T     P   P  Q  
Sbjct: 43  PPGSGNGIEDSGIGPGPAPSAPA-PSYGPPQTRPPPPPPPPQ-PTPPAPRPSYGPP-QTQ 99

Query: 631 PKGPXPXKXAGLPARFSHRXPPPLTXPSKKIXPPTXXGXXXPP 759
           P  P P      PA       PP T P +    PT      PP
Sbjct: 100 PPRPPPQPTPSAPAPPPPSYGPPQTPPPRPPPQPTPSAPAPPP 142


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 15/49 (30%), Positives = 18/49 (36%)
 Frame = +1

Query: 613 PXTQXAPKGPXPXKXAGLPARFSHRXPPPLTXPSKKIXPPTXXGXXXPP 759
           P  Q  P  P P   +  P +     PPP   PS    PP+      PP
Sbjct: 103 PPPQPTPSAPAPPPPSYGPPQTPPPRPPPQPTPSAPAPPPSYGPPQTPP 151



 Score = 29.5 bits (63), Expect = 6.4
 Identities = 28/103 (27%), Positives = 32/103 (31%), Gaps = 2/103 (1%)
 Frame = +1

Query: 457 PPGKGXXXX--GXXPXPPPXXXXXPXFRLXKXXSPHPRGVXRFXTKXGXTPRKXPXTQXA 630
           PPG G      G  P P P     P +   +   P P    +  T     P   P  Q  
Sbjct: 43  PPGSGNGIEDSGIGPGPAPSAPA-PSYGPPQTRPPPPPPPPQ-PTPPAPRPSYGPP-QTQ 99

Query: 631 PKGPXPXKXAGLPARFSHRXPPPLTXPSKKIXPPTXXGXXXPP 759
           P  P P      PA       PP T P +    PT      PP
Sbjct: 100 PPRPPPQPTPSAPAPPPPSYGPPQTPPPRPPPQPTPSAPAPPP 142


>X66270-1|CAA46985.1|  497|Drosophila melanogaster ems W13 protein.
          Length = 497

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 14/44 (31%), Positives = 17/44 (38%)
 Frame = +2

Query: 506 PXTPXXRXFGXGXXXHPTQGGXXGXPQXQGXPPGXNLXPKXPPK 637
           P     R F  G    P   G  G P  +  PP  N  P+ PP+
Sbjct: 265 PPAGLVRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPELPPQ 308


>BT021310-1|AAX33458.1|  494|Drosophila melanogaster RE15812p
           protein.
          Length = 494

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 14/44 (31%), Positives = 17/44 (38%)
 Frame = +2

Query: 506 PXTPXXRXFGXGXXXHPTQGGXXGXPQXQGXPPGXNLXPKXPPK 637
           P     R F  G    P   G  G P  +  PP  N  P+ PP+
Sbjct: 262 PPAGLVRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPELPPQ 305


>AE014297-1771|AAF54999.1|  494|Drosophila melanogaster CG2988-PA
           protein.
          Length = 494

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 14/44 (31%), Positives = 17/44 (38%)
 Frame = +2

Query: 506 PXTPXXRXFGXGXXXHPTQGGXXGXPQXQGXPPGXNLXPKXPPK 637
           P     R F  G    P   G  G P  +  PP  N  P+ PP+
Sbjct: 262 PPAGLVRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPELPPQ 305


>AE014296-1088|AAF50683.1|  239|Drosophila melanogaster CG12330-PA
           protein.
          Length = 239

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 16/53 (30%), Positives = 19/53 (35%)
 Frame = +1

Query: 601 PRKXPXTQXAPKGPXPXKXAGLPARFSHRXPPPLTXPSKKIXPPTXXGXXXPP 759
           P K P     P  P P    G P + + + PP    P     PP   G   PP
Sbjct: 35  PVKPPAPPPRPPPPAPANSYGPPKKGNGKPPP--APPKPSYGPPPKNGNGKPP 85


>X51653-1|CAA35965.1|  494|Drosophila melanogaster empty spiracles
           homeotic protein protein.
          Length = 494

 Score = 29.1 bits (62), Expect = 8.4
 Identities = 14/44 (31%), Positives = 16/44 (36%)
 Frame = +2

Query: 506 PXTPXXRXFGXGXXXHPTQGGXXGXPQXQGXPPGXNLXPKXPPK 637
           P     R F  G    P   G  G P  +  PP  N  P  PP+
Sbjct: 262 PPAGLVRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPDVPPQ 305


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,094,751
Number of Sequences: 53049
Number of extensions: 372584
Number of successful extensions: 836
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)