Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_P14
(875 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 1.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 1.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 1.9
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 3.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 3.3
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.4
Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical pr... 28 7.6
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/91 (24%), Positives = 25/91 (27%)
Frame = +1
Query: 457 PPGKGXXXXGXXPXPPPXXXXXPXFRLXKXXSPHPRGVXRFXTKXGXTPRKXPXTQXAPK 636
PP G P PPP P P P G+ G P P P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI---SGGPPPPPPPPGGCPP 770
Query: 637 GPXPXKXAGLPARFSHRXPPPLTXPSKKIXP 729
P P G PP + P + P
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 801
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/91 (24%), Positives = 25/91 (27%)
Frame = +1
Query: 457 PPGKGXXXXGXXPXPPPXXXXXPXFRLXKXXSPHPRGVXRFXTKXGXTPRKXPXTQXAPK 636
PP G P PPP P P P G+ G P P P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI---SGGPPPPPPPPGGCPP 770
Query: 637 GPXPXKXAGLPARFSHRXPPPLTXPSKKIXP 729
P P G PP + P + P
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 801
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/91 (24%), Positives = 25/91 (27%)
Frame = +1
Query: 457 PPGKGXXXXGXXPXPPPXXXXXPXFRLXKXXSPHPRGVXRFXTKXGXTPRKXPXTQXAPK 636
PP G P PPP P P P G+ G P P P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI---SGGPPPPPPPPGGCPP 353
Query: 637 GPXPXKXAGLPARFSHRXPPPLTXPSKKIXP 729
P P G PP + P + P
Sbjct: 354 PPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 384
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +1
Query: 613 PXTQXAPKGPXPXKXAGLPARFSHRXPPPLTXPSKKIXPPTXXGXXXPP 759
P + AP P P GLPA + PPP P P PP
Sbjct: 624 PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPP 672
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +1
Query: 613 PXTQXAPKGPXPXKXAGLPARFSHRXPPPLTXPSKKIXPPTXXGXXXPP 759
P + AP P P GLPA + PPP P P PP
Sbjct: 450 PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPP 498
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
F35A5.1 protein.
Length = 1274
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 601 PRKXPXTQXA-PKGPXPXKXAGLPARFSHRXPPPLTXPSKKIXPP 732
P K P A P+ P K +PA P P+ P KK PP
Sbjct: 945 PEKEPAKVAAKPRDLSPKKAIPIPANTQEAPPTPVKNPVKKWKPP 989
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +1
Query: 604 RKXPXTQXAPKGPXPXKXAGLPARFSHRXPPPLTXPSKKIXPP 732
+K P P+ P P K A P P+ P+KK PP
Sbjct: 173 KKEPAAAAKPRDPSPKKAAPSKEHDPIVPPTPIKNPAKKWKPP 215
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.4
Identities = 26/101 (25%), Positives = 28/101 (27%), Gaps = 2/101 (1%)
Frame = +1
Query: 463 GKGXXXXGXXPXPPPXXXXXPXFRLXKXXSPHPRGVXRFXTKXGXTPRKXPXTQXAPK-- 636
GK P PPP P P P + G P + P
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 286
Query: 637 GPXPXKXAGLPARFSHRXPPPLTXPSKKIXPPTXXGXXXPP 759
G P AG P PPP P PP G PP
Sbjct: 287 GSPPPPRAGSPPP----PPPPRGSPPTGSLPPPQAGGSPPP 323
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.4
Identities = 26/101 (25%), Positives = 28/101 (27%), Gaps = 2/101 (1%)
Frame = +1
Query: 463 GKGXXXXGXXPXPPPXXXXXPXFRLXKXXSPHPRGVXRFXTKXGXTPRKXPXTQXAPK-- 636
GK P PPP P P P + G P + P
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 307
Query: 637 GPXPXKXAGLPARFSHRXPPPLTXPSKKIXPPTXXGXXXPP 759
G P AG P PPP P PP G PP
Sbjct: 308 GSPPPPRAGSPPP----PPPPRGSPPTGSLPPPQAGGSPPP 344
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.4
Identities = 26/101 (25%), Positives = 28/101 (27%), Gaps = 2/101 (1%)
Frame = +1
Query: 463 GKGXXXXGXXPXPPPXXXXXPXFRLXKXXSPHPRGVXRFXTKXGXTPRKXPXTQXAPK-- 636
GK P PPP P P P + G P + P
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 292
Query: 637 GPXPXKXAGLPARFSHRXPPPLTXPSKKIXPPTXXGXXXPP 759
G P AG P PPP P PP G PP
Sbjct: 293 GSPPPPRAGSPPP----PPPPRGSPPTGSLPPPQAGGSPPP 329
>Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical
protein F53C11.5c protein.
Length = 830
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = +1
Query: 613 PXTQXAPKGPXPXKXAGLPARFSHRXPPPLTXPSKKIXPP 732
P P P P A + + H P PS+KI PP
Sbjct: 23 PPMYPYPSAPPPHPNAPMYYPYGHHAPSHAPMPSQKILPP 62
>Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical
protein F53C11.5b protein.
Length = 891
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = +1
Query: 613 PXTQXAPKGPXPXKXAGLPARFSHRXPPPLTXPSKKIXPP 732
P P P P A + + H P PS+KI PP
Sbjct: 84 PPMYPYPSAPPPHPNAPMYYPYGHHAPSHAPMPSQKILPP 123
>Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical
protein F53C11.5a protein.
Length = 855
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = +1
Query: 613 PXTQXAPKGPXPXKXAGLPARFSHRXPPPLTXPSKKIXPP 732
P P P P A + + H P PS+KI PP
Sbjct: 48 PPMYPYPSAPPPHPNAPMYYPYGHHAPSHAPMPSQKILPP 87
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,734,889
Number of Sequences: 27780
Number of extensions: 166898
Number of successful extensions: 498
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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