Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_P11
         (915 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    29   0.26 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.4  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   7.4  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 28.7 bits (61), Expect = 0.26
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -3

Query: 832 GGGXX*XXXGRGGXXGXGXGXGGWEXG 752
           GGG      GRGG  G G G GG + G
Sbjct: 65  GGGGRGGRGGRGGGRGRGRGRGGRDGG 91



 Score = 23.8 bits (49), Expect = 7.4
 Identities = 14/43 (32%), Positives = 16/43 (37%)
 Frame = -2

Query: 872 GGGPKAXQXYFYXGGGXXVTRXGKGXXXGPREXXGGVGXGXXG 744
           GGG          G G      G+G   G R+  GG G G  G
Sbjct: 58  GGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGGYG 100


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 17/57 (29%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
 Frame = +3

Query: 723 PXXXXXPPXSPXSHPPXPFPXPXXPPLP---XXXHXXPPPXIKIXLXSFXPTPXIXP 884
           P     PP SP +  P   P    PPLP         PP  I +      P P   P
Sbjct: 587 PPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPPVTILVPYPIIIPLPLPIP 643


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 12/31 (38%), Positives = 12/31 (38%)
 Frame = -1

Query: 831 GGGXXDXXXEGXVXRAXGXXXGGGKXXXGGG 739
           GGG      EG      G   GGG    GGG
Sbjct: 539 GGGSDGPEYEGAGRGGVGSGIGGGGGGGGGG 569


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,748
Number of Sequences: 2352
Number of extensions: 10887
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99228240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)