Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_P10
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0299 - 17051570-17052474,17053542-17053755                       32   0.73 
12_01_0611 - 5034481-5034709,5034863-5035020,5035231-5035475,503...    29   3.9  
11_04_0009 - 12132781-12133272                                         28   9.0  

>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 23/68 (33%), Positives = 23/68 (33%)
 Frame = +1

Query: 703 PFXXPLINXQ*XSYPPXNWLPFLCFPGPXGRVWXGFFXXLMDXXQPPXKXPXXXXGPPFP 882
           PF  P I       PP    PF   P P        F  L     PP   P     P FP
Sbjct: 241 PFPLPPIPFLTPPSPPPPAFPFPLPPWPWAPPPAFPFPHLPPIFSPPSPPPPPP--PAFP 298

Query: 883 FPXPXXPP 906
           FP P  PP
Sbjct: 299 FPFPQLPP 306


>12_01_0611 -
           5034481-5034709,5034863-5035020,5035231-5035475,
           5036686-5036983,5037644-5038482,5039763-5039823
          Length = 609

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 14/37 (37%), Positives = 16/37 (43%)
 Frame = -1

Query: 893 GXGKGKGGPXXQXGXLXGGWXXSIKXXKKPXQTLPXG 783
           G  +G GGP        GGW    K  KKP Q +  G
Sbjct: 5   GDRRGGGGPPGSGDDSGGGWETVEKRVKKPAQQVGKG 41


>11_04_0009 - 12132781-12133272
          Length = 163

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 222 RSSTWAREQRWSCSKPAPERRRRIGSLR 139
           R   W RE+R S  +  P +RRR+G  R
Sbjct: 108 RGEAWRRERRDSKIESRPSQRRRVGGRR 135


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,101,858
Number of Sequences: 37544
Number of extensions: 391647
Number of successful extensions: 843
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)