Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_P09
         (887 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.4  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   5.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   7.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +3

Query: 552  YFKILNTKRNQYLTLGVNTNGHXGHMALRSQQRXQFQN 665
            Y++I N  RNQ   +  +T+G  G  A    Q   F++
Sbjct: 906  YYEICNRIRNQRWIVNRDTSGATGPFAYHGDQWVGFED 943



 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 141  QPPSTTPL*RTSFTTASSLRITTAL 215
            +PPSTT   +T  TT+++ R TT +
Sbjct: 1175 RPPSTTNHWQTKTTTSTTTRPTTTV 1199


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 629 GPTESTASTVSEPSGTCXP 685
           GPT ST STV  P+    P
Sbjct: 301 GPTYSTWSTVQTPTTVMSP 319


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = +3

Query: 366 FPVEFRLIFAENNIKLMYK 422
           FP+++ L+F+E  + L++K
Sbjct: 701 FPIDYSLVFSETKL-LLFK 718


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,174
Number of Sequences: 336
Number of extensions: 2487
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24617054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)