Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_P08
(884 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.08c |rpl3401|rpl34, rpl34-1|60S ribosomal protein L34|S... 71 2e-13
SPCC1322.15 |rpl3402|rpl34, rpl34-2|60S ribosomal protein L34|Sc... 67 3e-12
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.002
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.003
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 37 0.003
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 37 0.004
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 37 0.004
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.018
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 34 0.031
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.12
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 30 0.50
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.2
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 28 1.5
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 28 2.0
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 28 2.0
SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit Air1|Schi... 27 3.6
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 4.7
SPAC29B12.13 |||carbon-sulfur lyase |Schizosaccharomyces pombe|c... 26 6.2
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom... 26 6.2
>SPAC23A1.08c |rpl3401|rpl34, rpl34-1|60S ribosomal protein
L34|Schizosaccharomyces pombe|chr 1|||Manual
Length = 112
Score = 71.3 bits (167), Expect = 2e-13
Identities = 36/59 (61%), Positives = 40/59 (67%)
Frame = +1
Query: 217 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 393
CG L+GI RP E +RL + KKTV+R YGG L VK RIVRAFLIEEQKIVK
Sbjct: 44 CGDTGVPLQGIPALRPREFARLSHNKKTVQRAYGGCLSANAVKDRIVRAFLIEEQKIVK 102
Score = 58.4 bits (135), Expect = 1e-09
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = +3
Query: 87 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR 215
M QR+T+RRRL+YNT+SN+ RI++TPG + Y ++KK IPR
Sbjct: 1 MAQRVTYRRRLAYNTRSNRTRIIKTPGNNIRYLHIKKLGTIPR 43
>SPCC1322.15 |rpl3402|rpl34, rpl34-2|60S ribosomal protein
L34|Schizosaccharomyces pombe|chr 3|||Manual
Length = 111
Score = 67.3 bits (157), Expect = 3e-12
Identities = 34/59 (57%), Positives = 39/59 (66%)
Frame = +1
Query: 217 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 393
CG L+GI RP E +RL + +K V+R YGG L VK RIVRAFLIEEQKIVK
Sbjct: 44 CGDTGVPLQGIPALRPREFARLSHNQKKVQRAYGGCLSANAVKDRIVRAFLIEEQKIVK 102
Score = 58.4 bits (135), Expect = 1e-09
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = +3
Query: 87 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR 215
M QR+T+RRRL+YNT+SN+ RI++TPG + Y ++KK IPR
Sbjct: 1 MAQRVTYRRRLAYNTRSNKTRIIKTPGNNIRYLHIKKLGTIPR 43
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 37.9 bits (84), Expect = 0.002
Identities = 26/87 (29%), Positives = 26/87 (29%), Gaps = 6/87 (6%)
Frame = +1
Query: 640 PXXPPXXXXXXPPXXXPXXXXXPP---PPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPX 810
P P PP PP PP P P PP P P P
Sbjct: 393 PAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP-PLPP 451
Query: 811 PXPXPPPPP---XPXPPXPPXXXXPPP 882
P PP P PP PP PPP
Sbjct: 452 SAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 37.1 bits (82), Expect = 0.003
Identities = 21/70 (30%), Positives = 21/70 (30%)
Frame = +1
Query: 673 PPXXXPXXXXXPPPPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPXPXPXPPPPPXPXPP 852
PP P PP P P PP P P P P P PP P PP
Sbjct: 420 PPSLPPSAPPSLPPSA--PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Query: 853 XPPXXXXPPP 882
P P
Sbjct: 478 PAPAPAPAAP 487
Score = 30.7 bits (66), Expect = 0.29
Identities = 18/66 (27%), Positives = 18/66 (27%), Gaps = 2/66 (3%)
Frame = +1
Query: 640 PXXPPXXXXXXPPXXXPXXXXXPPPPXXXPXXXXXXXPXXPPXXP--XXXXXPXXPXPXP 813
P PP PP P PPP P P P P P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSK 289
Query: 814 XPXPPP 831
P PPP
Sbjct: 290 PPLPPP 295
Score = 29.9 bits (64), Expect = 0.50
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = +2
Query: 671 PPPXPPXXXXXXPPXPXXPXXXXXPXXPXPPPXXXXXXXXXXXPPPXPXXPPP 829
PPP PP P P PPP PP PPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPP 363
Score = 29.5 bits (63), Expect = 0.67
Identities = 16/64 (25%), Positives = 16/64 (25%)
Frame = +1
Query: 640 PXXPPXXXXXXPPXXXPXXXXXPPPPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPXPXP 819
P PP PP P P P P P P P P P
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Query: 820 XPPP 831
P P
Sbjct: 481 APAP 484
Score = 28.3 bits (60), Expect = 1.5
Identities = 23/97 (23%), Positives = 23/97 (23%), Gaps = 2/97 (2%)
Frame = +1
Query: 598 PXXXPXXXXXXXXXPXXPPXXXXXXPPXXXPXXXXXPPPPXXXPXXXXXXXPXXPPXXPX 777
P P P P PP PP P PP P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG 397
Query: 778 XXXXPXXPXPXPXPXPPPPPXPXPPXPPXXXXP--PP 882
P P PP P PP P P PP
Sbjct: 398 RSA-PALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP 433
Score = 27.1 bits (57), Expect = 3.6
Identities = 18/70 (25%), Positives = 18/70 (25%)
Frame = +1
Query: 673 PPXXXPXXXXXPPPPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPXPXPXPPPPPXPXPP 852
PP P PP P PP P PPPPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPR---S 368
Query: 853 XPPXXXXPPP 882
P PPP
Sbjct: 369 APSTGRQPPP 378
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.5 bits (83), Expect = 0.003
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +2
Query: 671 PPPXPPXXXXXXPPXPXXPXXXXXPXXPXPPPXXXXXXXXXXXPPPXPXXPP 826
PPP PP P P P PPP PPP P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 37.1 bits (82), Expect = 0.003
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +1
Query: 706 PPPPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPXPXPXPPPPPXPXPP 852
PPP P P PP P P P PPPP P PP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 33.9 bits (74), Expect = 0.031
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 799 PXPXPXPXPPPPPXPXPPXPPXXXXPP 879
P P P P P PPP P PP PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 33.1 bits (72), Expect = 0.054
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = +1
Query: 706 PPPPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPXPXPXPPPPPXPXPPXPPXXXXPPP 882
PPPP P P P P P P PPPPP PP PPP
Sbjct: 732 PPPP---PPAVIVPTPAPAPIP----VPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 33.1 bits (72), Expect = 0.054
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 798 PXPPPXPXPPPXPXPPPPPXPXXXXXPP 881
P PPP P P PPPPP PP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 32.7 bits (71), Expect = 0.071
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = +2
Query: 641 PXPXXXXXXXPPPXPPXXXXXXPPXPXXPXXXXXPXXPXPPPXXXXXXXXXXXPPPXPXX 820
P P PPP P PP P P P PPP P P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Query: 821 PP 826
P
Sbjct: 802 EP 803
Score = 27.9 bits (59), Expect = 2.0
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = +1
Query: 673 PPXXXPXXXXXPPPPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPXPXPXPPPPP 837
PP P P P P PP P P P PPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP---PPPPP 783
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 37.1 bits (82), Expect = 0.003
Identities = 23/80 (28%), Positives = 23/80 (28%)
Frame = +1
Query: 640 PXXPPXXXXXXPPXXXPXXXXXPPPPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPXPXP 819
P P PP P PPP P P P P P P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQ-PAAPVKSP-P 185
Query: 820 XPPPPPXPXPPXPPXXXXPP 879
P P PP PP PP
Sbjct: 186 SAPSLPSAVPPMPPKVPPPP 205
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/37 (35%), Positives = 13/37 (35%), Gaps = 1/37 (2%)
Frame = +1
Query: 751 PXXP-PXXPXXXXXPXXPXPXPXPXPPPPPXPXPPXP 858
P P P P P P PPP P PP P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIP 161
Score = 26.2 bits (55), Expect = 6.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 804 PPPXPXPPPXPXPPPPP 854
PPP P P P P PP
Sbjct: 6 PPPPPAPAPAAAAPAPP 22
Score = 26.2 bits (55), Expect = 6.2
Identities = 17/60 (28%), Positives = 17/60 (28%), Gaps = 1/60 (1%)
Frame = +1
Query: 706 PPPPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPXPXPXPP-PPPXPXPPXPPXXXXPPP 882
P PP P PP P P P PP P P P P PP
Sbjct: 128 PAPPT--PQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 36.7 bits (81), Expect = 0.004
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -1
Query: 881 GGGXXXXGGXGGXGXGGGGGXGXGXGXGXXGXXXXXGXXGGXXGXXXXXXXGXXXGGGG 705
GG GG G G GGG G G G G G GG G G GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 27.5 bits (58), Expect = 2.7
Identities = 23/69 (33%), Positives = 23/69 (33%)
Frame = -1
Query: 878 GGXXXXGGXGGXGXGGGGGXGXGXGXGXXGXXXXXGXXGGXXGXXXXXXXGXXXGGGGXX 699
G GG G G GG G G G G G G GG G G G GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRG-GFGGGRGG--ARGGGRGGARG-GRGGRGGARGGRGGSS 61
Query: 698 XXXGXXXGG 672
G GG
Sbjct: 62 GGRGGAKGG 70
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = -3
Query: 825 GGXXGXGGGXXXXXXXXXXXGGGXGXXGXXXXXGXXGXGGXXXXXXGGXGG 673
GG G GG GGG G G G G GG GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 36.7 bits (81), Expect = 0.004
Identities = 20/76 (26%), Positives = 20/76 (26%)
Frame = +1
Query: 652 PXXXXXXPPXXXPXXXXXPPPPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPXPXPXPPP 831
P PP P P P PP P P P P P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPK 1202
Query: 832 PPXPXPPXPPXXXXPP 879
P PP PP PP
Sbjct: 1203 PSVGVPPVPPPSTAPP 1218
Score = 35.1 bits (77), Expect = 0.013
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = +1
Query: 673 PPXXXPXXXXXPPPPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPXPXPXPPPPPXPXPP 852
PP P P P PP P P P P PPP PP
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Query: 853 XPPXXXXPPP 882
P PP
Sbjct: 1200 VPKPSVGVPP 1209
Score = 33.9 bits (74), Expect = 0.031
Identities = 20/70 (28%), Positives = 20/70 (28%), Gaps = 1/70 (1%)
Frame = +1
Query: 673 PPXXXPXXXXXPPPPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPXPXPXPPPPPXPXPP 852
PP P P P P P P P P P PPP PP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Query: 853 XP-PXXXXPP 879
P P PP
Sbjct: 1219 VPTPSAGLPP 1228
Score = 33.1 bits (72), Expect = 0.054
Identities = 18/69 (26%), Positives = 18/69 (26%)
Frame = +1
Query: 673 PPXXXPXXXXXPPPPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPXPXPXPPPPPXPXPP 852
PP P P P PP P P P P P P PP
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Query: 853 XPPXXXXPP 879
P PP
Sbjct: 1152 VPAPSGAPP 1160
Score = 32.3 bits (70), Expect = 0.094
Identities = 19/77 (24%), Positives = 19/77 (24%)
Frame = +1
Query: 652 PXXXXXXPPXXXPXXXXXPPPPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPXPXPXPPP 831
P PP P P P PP P P P P P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPT 1221
Query: 832 PPXPXPPXPPXXXXPPP 882
P PP P PP
Sbjct: 1222 PSAGLPPVPVPTAKAPP 1238
Score = 31.9 bits (69), Expect = 0.12
Identities = 22/80 (27%), Positives = 22/80 (27%), Gaps = 3/80 (3%)
Frame = +1
Query: 649 PPXXXXXXPPXXXPXXXXXPPPPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPXPXPXPP 828
PP P PP P P P P P P P P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAP-PVPAPSSGIP 1179
Query: 829 PPPXPX---PPXPPXXXXPP 879
P P P PP PP PP
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPP 1199
Score = 31.5 bits (68), Expect = 0.17
Identities = 21/82 (25%), Positives = 21/82 (25%), Gaps = 2/82 (2%)
Frame = +1
Query: 640 PXXPPXXXXXXPPXXXPXXXXXPPPPXXXPXXXXXXXPXX--PPXXPXXXXXPXXPXPXP 813
P P P P P P P P PP P P P
Sbjct: 970 PPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSA 1029
Query: 814 XPXPPPPPXPXPPXPPXXXXPP 879
P P P PP P PP
Sbjct: 1030 DAPPIPVPSTAPPVPIPTSTPP 1051
Score = 31.5 bits (68), Expect = 0.17
Identities = 18/60 (30%), Positives = 18/60 (30%), Gaps = 3/60 (5%)
Frame = +1
Query: 709 PPPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPXPXPXPPPPPXP---XPPXPPXXXXPP 879
PPP P P P P P P PP P P PP P PP
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Score = 31.5 bits (68), Expect = 0.17
Identities = 20/77 (25%), Positives = 20/77 (25%)
Frame = +1
Query: 652 PXXXXXXPPXXXPXXXXXPPPPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPXPXPXPPP 831
P PP P P P PP P P P P P P
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPV-PVPSGAPPVPKPSVAAPPVP 1153
Query: 832 PPXPXPPXPPXXXXPPP 882
P PP P PP
Sbjct: 1154 APSGAPPVPKPSVAAPP 1170
Score = 30.7 bits (66), Expect = 0.29
Identities = 26/105 (24%), Positives = 26/105 (24%), Gaps = 1/105 (0%)
Frame = +1
Query: 568 PPXXXXXXXXPXXXPXXXXXXXXXPXXPPXXXXXXPPXXXPXXXXXPPPPXXXPXXXXXX 747
PP P P P P PP P P P
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGA--PPVPAPSGIPPVPKPSVAAPPVPKP 1107
Query: 748 XPXXPPXXPXXXXXPXXPXPXPXPXPPPPPXPXPPXP-PXXXXPP 879
PP P P P P P P P PP P P PP
Sbjct: 1108 SVAVPPV-PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Score = 29.5 bits (63), Expect = 0.67
Identities = 19/75 (25%), Positives = 19/75 (25%)
Frame = +1
Query: 652 PXXXXXXPPXXXPXXXXXPPPPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPXPXPXPPP 831
P PP P PP P PP P P P P P
Sbjct: 1015 PKLSSKAPPVPLPSADA-PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEI 1073
Query: 832 PPXPXPPXPPXXXXP 876
P P P P P
Sbjct: 1074 PSIPAPSGAPPVPAP 1088
Score = 29.5 bits (63), Expect = 0.67
Identities = 16/59 (27%), Positives = 16/59 (27%)
Frame = +1
Query: 706 PPPPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPXPXPXPPPPPXPXPPXPPXXXXPPP 882
PP P P P P P P P P P P P P PP
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Score = 29.5 bits (63), Expect = 0.67
Identities = 18/76 (23%), Positives = 18/76 (23%)
Frame = +1
Query: 652 PXXXXXXPPXXXPXXXXXPPPPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPXPXPXPPP 831
P PP P P PP PP P P P P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPV 1231
Query: 832 PPXPXPPXPPXXXXPP 879
P PP P P
Sbjct: 1232 PTAKAPPVPAPSSEAP 1247
Score = 26.6 bits (56), Expect = 4.7
Identities = 18/80 (22%), Positives = 18/80 (22%)
Frame = +1
Query: 640 PXXPPXXXXXXPPXXXPXXXXXPPPPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPXPXP 819
P PP P PP P P P P P
Sbjct: 963 PAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAP 1022
Query: 820 XPPPPPXPXPPXPPXXXXPP 879
P P PP P PP
Sbjct: 1023 PVPLPSADAPPIPVPSTAPP 1042
Score = 26.2 bits (55), Expect = 6.2
Identities = 19/81 (23%), Positives = 19/81 (23%)
Frame = +1
Query: 640 PXXPPXXXXXXPPXXXPXXXXXPPPPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPXPXP 819
P PP PP P P PP PP P P P
Sbjct: 1189 PPVPPPSEA--PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEA 1246
Query: 820 XPPPPPXPXPPXPPXXXXPPP 882
P P P P P
Sbjct: 1247 PSVSTPRSSVPSPHSNASPSP 1267
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.7 bits (76), Expect = 0.018
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 4/45 (8%)
Frame = +1
Query: 760 PPXXPXXXXXPXX----PXPXPXPXPPPPPXPXPPXPPXXXXPPP 882
PP P P P P P PPPP P P P PPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 34.3 bits (75), Expect = 0.023
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 798 PXPPPXPXPPPXPXPPPPPXPXXXXXPP 881
P PPP PPP PP P P PP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 32.3 bits (70), Expect = 0.094
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Frame = +1
Query: 751 PXXPPXXPXXXXXPXXPXPXPXPXPPPPPXPXPPXPPXXXXP--PP 882
P P P P P PPPPP PP P P PP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +2
Query: 677 PXPPXXXXXXPPXPXXPXXXXXPXXPXPPP 766
P PP PP P P P PPP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Frame = +1
Query: 760 PPXXPXXXXXPXXPXPXPX--PXPPPPPXPXPPXP 858
PP P P P P P PPPP P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 798 PXPPPXPXPPPXPXPPPPPXP 860
P P P P P PPPP P
Sbjct: 1716 PPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.1 bits (57), Expect = 3.6
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +3
Query: 663 PXXPPPXXPXXXXXXPPXXXXPXXXXXXXXXXPPXXAXXXXXXXXPXPPPXPXPPPXPXP 842
P PP P PP P PP A P PP PPP P
Sbjct: 1686 PVSTPPVRPQSAA--PPQMSAPTPPPPPMSVPPPPSAPPM-----PAGPPSAPPPPLPAS 1738
Query: 843 PPPPXP 860
P P
Sbjct: 1739 SAPSVP 1744
Score = 25.8 bits (54), Expect = 8.2
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +1
Query: 706 PPPPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPXPXPXPPPPPXPXP 849
PPPP P PP P P P P P P P P
Sbjct: 1708 PPPPMSVPP---------PPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.9 bits (74), Expect = 0.031
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 798 PXPPPXPXPPPXPXPPPPP 854
P PPP PP P PPPPP
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
Score = 33.1 bits (72), Expect = 0.054
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 798 PXPPPXPXPPPXPXPPPPPXP 860
P PPP P P PPPPP P
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 31.1 bits (67), Expect = 0.22
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 811 PXPXPPPPPXPXPPXPPXXXXPPP 882
P PPPPP P PP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 31.1 bits (67), Expect = 0.22
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 805 PXPXPXPPPPPXPXPPXPPXXXXPP 879
P P PPPPP PP P PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 31.1 bits (67), Expect = 0.22
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
Frame = +3
Query: 798 PXPPPXPXPPP---XPXPPPPPXP 860
P PP P PPP P PPPP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 29.9 bits (64), Expect = 0.50
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 799 PXPXPXPXPPPPPXPXPPXPP 861
P P P P PP P PP PP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 805 PXPXPXPPPPPXPXPPXPPXXXXPPP 882
P P PPPPP P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 790 PXXPXPXPXPXPPPPPXPXPPXPP 861
P P P P P PP PP PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 760 PPXXPXXXXXPXXPXPXPXPXPPPPP 837
PP P P P P PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.9 bits (69), Expect = 0.12
Identities = 21/64 (32%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = -3
Query: 828 GGGXXGXGGGXXXXXXXXXXXGGGXGXXG-XXXXXGXXGXGGXXXXXXGGXGGGXXXXXX 652
GGG G GGG GG G G G G GG GG GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 651 XGXG 640
G G
Sbjct: 247 FGGG 250
Score = 31.9 bits (69), Expect = 0.12
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = -3
Query: 825 GGXXGXGGGXXXXXXXXXXXGGGXGXXGXXXXXGXXGXGGXXXXXXGGXGG 673
GG G GGG GGG G G G G GG GG GG
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFG----GGLGGFGGGPGGFGGGPGG 267
Score = 30.7 bits (66), Expect = 0.29
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -2
Query: 880 GGXXXXXGXGGGGGXGXGGGXGXGGGXG 797
GG G GGG G GGG G GG G
Sbjct: 245 GGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 29.5 bits (63), Expect = 0.67
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -2
Query: 880 GGXXXXXGXGGGGGXGXGGG-XGXGGGXG 797
GG G GGG G GGG G GGG G
Sbjct: 231 GGFEGGPGGFGGGPGGFGGGLGGFGGGPG 259
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -2
Query: 880 GGXXXXXGXGGGGGXGXGGGX-GXGGGXG 797
GG G GGG G GGG G GGG G
Sbjct: 238 GGFGGGPGGFGGGLGGFGGGPGGFGGGPG 266
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 859 GXGGGGGXGXGGGXGXGGGXG 797
G GGG G GG G GGG G
Sbjct: 225 GFGGGPGGFEGGPGGFGGGPG 245
Score = 26.2 bits (55), Expect = 6.2
Identities = 21/77 (27%), Positives = 21/77 (27%), Gaps = 4/77 (5%)
Frame = -2
Query: 880 GGXXXXXGXGGGGGXGXGGGXG----XGGGXGXXXXXXXXAXXGGXXXXXXXXXXGXXXX 713
G G GGG G GGG G GG G G G
Sbjct: 177 GNLFHHRGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGG 236
Query: 712 GGXXXXXXGXXGGGXXG 662
G G GGG G
Sbjct: 237 PGGFGGGPGGFGGGLGG 253
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 828 GGGXXGXGGGXXXXXXXXXXXGGGXGXXG 742
GGG G GGG GGG G G
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 25.8 bits (54), Expect = 8.2
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -3
Query: 828 GGGXXGXGGGXXXXXXXXXXXGGGXGXXGXXXXXGXXGXGG 706
GGG G GG GGG G G G GG
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 29.9 bits (64), Expect = 0.50
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +1
Query: 751 PXXPPXXPXXXXXPXXPXPXPXPXPPPPPXPXPPXPPXXXXPPP 882
P PP P P P P P P P PP P P
Sbjct: 104 PREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 790 PXXPXPXPXPXPPPPPXPXPPXPPXXXXPPP 882
P P P P PPPPP P P P
Sbjct: 229 PKQADPLPAPPPPPPPTLPPQSTNTSQLPMP 259
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/18 (61%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
Frame = +3
Query: 810 PXPXPPPXPXPPP-PPXP 860
P PPP P PPP PP P
Sbjct: 802 PFKAPPPAPLPPPAPPLP 819
Score = 26.6 bits (56), Expect = 4.7
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 804 PPPXPXPPPXPXPP 845
PPP P PPP P P
Sbjct: 806 PPPAPLPPPAPPLP 819
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.9 bits (59), Expect = 2.0
Identities = 22/83 (26%), Positives = 22/83 (26%), Gaps = 3/83 (3%)
Frame = +1
Query: 640 PXXPPXXXXXXPPXXX--PXXXXXPPPPXXXPXXXXXXXPXXPPXXPXXXXXPXXPXPXP 813
P P PP P P PP P PP P P P
Sbjct: 566 PVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQ-PPVAPVAPEVPSVPQRPA 624
Query: 814 XP-XPPPPPXPXPPXPPXXXXPP 879
P P P P PP P P
Sbjct: 625 VPVVPEAPSVPQPPAAPVVPEVP 647
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.9 bits (59), Expect = 2.0
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = -1
Query: 881 GGGXXXXGGXGGXGXGGG--GGXGXGXGXGXXGXXXXXGXXGGXXG 750
GG GG G GGG GG G G G G G GG G
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRG-GFRGGSRGGFRG 192
>SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit
Air1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 313
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 108 RRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRXWS 224
RR + N KS+++R PG L + KPK R S
Sbjct: 244 RREQNRNQKSSKQRPFHKPGNSLASRLGSKPKSFKRKHS 282
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
Frame = +3
Query: 798 PXPP-PXPXPPPXPXPPPPP 854
P PP P P P PPPPP
Sbjct: 729 PAPPTPAPTPAVKHHPPPPP 748
>SPAC29B12.13 |||carbon-sulfur lyase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 137
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 461 LSPKIHFVAFFADLVLACCALRTFTIFCSS 372
L IH A + L+CC T I+CSS
Sbjct: 9 LCKAIHLKAIIEEPKLSCCHCETCRIWCSS 38
>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 108 RRRLSYNTKSN-QRRIVRTPGGRLVY 182
R+ SY T + +RIV+ PGGR +Y
Sbjct: 161 RQHESYATSARGSKRIVQVPGGRRIY 186
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,458,756
Number of Sequences: 5004
Number of extensions: 49577
Number of successful extensions: 893
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 392
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 444486180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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