Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_P08
(884 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 27 0.30
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 26 0.53
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 25 1.2
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 2.7
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 23 2.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 2.8
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 23 2.8
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 22 8.6
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 26.6 bits (56), Expect = 0.30
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 859 GXGGGGGXGXGGGXGXGGGXG 797
G G G G G GG G GG G
Sbjct: 79 GRGKGRGHGKGGSRGRGGNRG 99
Score = 22.6 bits (46), Expect = 4.9
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -2
Query: 877 GXXXXXGXGGGGGXGXGGGXGXGG 806
G G G GG G GG G G
Sbjct: 79 GRGKGRGHGKGGSRGRGGNRGRTG 102
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.8 bits (54), Expect = 0.53
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 825 PPXPXPPPPP 854
PP P PPPPP
Sbjct: 338 PPKPAPPPPP 347
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 805 PXPXPXPPPPPXPXP 849
P P P PPPP P
Sbjct: 339 PKPAPPPPPPSSSGP 353
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 807 PPXPXPPPXPXPPPPP 854
PP P PPP P P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 832 PPXPXPPXPPXXXXPP 879
PP P PP PP P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 22.2 bits (45), Expect = 6.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 826 PPPPXPXPPXP 858
PP P P PP P
Sbjct: 338 PPKPAPPPPPP 348
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 24.6 bits (51), Expect = 1.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 150 IVRTPGGRLVYQYVKKPKKI 209
+ + G RLVYQ+V PK I
Sbjct: 527 LAKVDGQRLVYQFVDVPKDI 546
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 20.6 bits (41), Expect(2) = 2.7
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +1
Query: 817 PXPPPPP 837
P PPPPP
Sbjct: 1355 PPPPPPP 1361
Score = 20.6 bits (41), Expect(2) = 2.7
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +3
Query: 834 PXPPPPP 854
P PPPPP
Sbjct: 1355 PPPPPPP 1361
Score = 20.6 bits (41), Expect(2) = 2.7
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +1
Query: 823 PPPPPXP 843
PPPPP P
Sbjct: 1356 PPPPPPP 1362
Score = 20.6 bits (41), Expect(2) = 2.7
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +3
Query: 840 PPPPPXP 860
PPPPP P
Sbjct: 1356 PPPPPPP 1362
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 23.4 bits (48), Expect = 2.8
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -1
Query: 476 GFYLNLSPKIHFVAFFAD 423
G Y + P IHF FAD
Sbjct: 452 GDYFFICPSIHFAQLFAD 469
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.4 bits (48), Expect = 2.8
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +1
Query: 799 PXPXPXPXPPPPPXPXPPXPPXXXXPPP 882
P P P P P PP P PPP
Sbjct: 23 PQPSPHQSPQAPQRGSPPNP--SQGPPP 48
Score = 22.2 bits (45), Expect = 6.5
Identities = 12/36 (33%), Positives = 12/36 (33%), Gaps = 2/36 (5%)
Frame = +1
Query: 760 PPXXPXXXXXPXXPXPXPXPXPP--PPPXPXPPXPP 861
P P P P P P PPP P PP
Sbjct: 21 PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +3
Query: 804 PPPXPXPPPXPXPPPPP 854
P P PPP P PP
Sbjct: 40 PNPSQGPPPGGPPGAPP 56
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 23.4 bits (48), Expect = 2.8
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -1
Query: 476 GFYLNLSPKIHFVAFFAD 423
G Y + P IHF FAD
Sbjct: 452 GDYFFICPSIHFAQLFAD 469
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 73 QKA*KWCSGLHSGDDC 120
QKA C G+ GD+C
Sbjct: 109 QKAISECKGIAKGDNC 124
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,815
Number of Sequences: 438
Number of extensions: 9204
Number of successful extensions: 42
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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