Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_P07
(870 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0357 - 28668894-28669238,28669510-28669537,28669578-286696... 34 0.17
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 32 0.69
09_05_0006 - 20030673-20030895,20031432-20031478,20031597-200316... 31 0.91
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 31 0.91
02_05_0686 - 30900748-30902167,30903442-30904742 30 2.1
01_05_0490 + 22672241-22674679 30 2.8
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 3.7
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862... 29 4.8
04_04_1125 + 31085106-31085714 29 4.8
12_02_1174 - 26696869-26698191 28 8.5
09_06_0264 - 21929086-21931368 28 8.5
01_05_0536 - 23011618-23011635,23011871-23012052,23012160-230123... 28 8.5
>01_06_0357 -
28668894-28669238,28669510-28669537,28669578-28669635,
28669836-28669916,28670395-28670526,28670609-28670926,
28672495-28673317
Length = 594
Score = 33.9 bits (74), Expect = 0.17
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +3
Query: 741 VPPXPXPPXXNXRGPPHLPFTXGXNXXPPT*SPSIXXALXP 863
+PP P PP PP LP T PP SP L P
Sbjct: 1 MPPPPPPPPPPPPSPPRLPLTAHRLPLPPATSPPASLLLAP 41
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 31.9 bits (69), Expect = 0.69
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 738 PVPPXPXPPXXNXRGPPHLPFTXGXNXXPPT 830
P PP P PP N PP P + PPT
Sbjct: 77 PPPPPPPPPPRNSPSPPKPPSQAAQSPLPPT 107
>09_05_0006 -
20030673-20030895,20031432-20031478,20031597-20031665,
20032590-20032725,20032900-20033067,20034286-20034354,
20034535-20034631,20034742-20034820,20035702-20035872
Length = 352
Score = 31.5 bits (68), Expect = 0.91
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 288 SELFLICFRHVCGCRRHAAAKLFHFLI 208
S LF++CF H C + + LFHFL+
Sbjct: 95 SYLFMLCFHHKKSCVVFSESNLFHFLV 121
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 31.5 bits (68), Expect = 0.91
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -3
Query: 868 WGGXRAXXMDGDHVGGXXLXPSVKGRCGGPRXFXWGGXGXGGTG 737
+ G R DG + GG G GGP + GG G GG G
Sbjct: 39 YSGGRGRGQDGSYPGGRGGGYGGGGGGGGPPYYGGGGGGGGGGG 82
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 738 PVPPXPXPPXXNXRGPPHLPFTXGXNXXPPT*SPS 842
P PP PP +GPP P G PP PS
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPS 363
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 5/49 (10%)
Frame = +3
Query: 738 PVPPXPXPPXXNXRGPPHLPFTXGXNXXP-----PT*SPSIXXALXPPH 869
P PP P PP GPP P G + P PT S L P H
Sbjct: 362 PSPPPPPPPGGKKGGPPPPPPKGGASRPPAAPGVPTGSADQQAKLKPLH 410
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 738 PVPPXPXPPXXNXRGPPHLPFTXGXNXXPP 827
P PP PP +GPP P G + PP
Sbjct: 338 PPPPKGPPPPPPAKGPPPPPPPKGPSPPPP 367
>01_05_0490 + 22672241-22674679
Length = 812
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +3
Query: 708 IIXXTYILT*PVPPXPXPPXXNXRGPPHLPFTXGXNXXPPT 830
++ TY L P PP P PP PP P + G PP+
Sbjct: 682 VVYYTYPLPPPSPPLPPPPP-----PPPPPMSEGEEEAPPS 717
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 738 PVPPXPXPPXXNXRGPPHLPFTXGXNXXPP-T*SPSIXXALXPP 866
P PP P PP + R PP P PP + SP+ L PP
Sbjct: 74 PPPPAPRPPRRHHRIPPPPPPLLPTPPPPPASISPTPAPPLPPP 117
>10_08_0608 +
19184722-19185224,19185331-19185410,19186048-19186235,
19187021-19187927,19188015-19188142,19189270-19189356,
19189422-19189472,19189582-19189668,19189746-19189873,
19190469-19190608,19190721-19190882,19190964-19192733,
19192807-19192922,19193077-19193227,19193243-19193371,
19193598-19194139
Length = 1722
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +3
Query: 738 PVPPXPXPPXXNXRGPPHLPFTXGXNXXPPT*SPSI 845
P PP P PP PP P G PP P +
Sbjct: 28 PPPPHPPPPPPLEPAPPSTPQLRGEASPPPPPPPPV 63
>04_04_1125 + 31085106-31085714
Length = 202
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +3
Query: 738 PVPPXPXPPXXNXRGPPHLPFTXGXNXXPPT*SPS 842
P PP P P PP P T PPT +P+
Sbjct: 70 PTPPTPTPWTPTPATPPPTPATPATPTTPPTPAPA 104
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = +3
Query: 738 PVPPXPXPPXXNXR-GPPHLP 797
PVPP P PP R PPH P
Sbjct: 121 PVPPPPPPPRTRTRVEPPHRP 141
>09_06_0264 - 21929086-21931368
Length = 760
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 96 LLIVSISIQDVAAVSVYRRSIKDINDLNRDLQATGWRILKNEKASPPRGV--DIHKRDES 269
L VS +Q VS +R ++ RD+ + LK EK +PP GV D+ KR +
Sbjct: 178 LAAVSSMVQGRKEVSKWRYCFTELEKDKRDILDRCCQ-LKKEKETPPPGVGTDVVKRSQQ 236
Query: 270 KLKT 281
+ T
Sbjct: 237 HILT 240
>01_05_0536 -
23011618-23011635,23011871-23012052,23012160-23012396,
23012480-23012593,23012806-23013025,23013143-23013229
Length = 285
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +3
Query: 261 DESKLKTIPSTASTLLIPDQQDLEHPTKAQQRKETEVVDSANNNLFDGVSLFVGD 425
D+ L P+T P ++D +HP R ++ S N+ D +++ +GD
Sbjct: 71 DDPPLSESPTTDLGCHDPREEDADHPAPPMGRDSDDIFASTNS---DNMNMLIGD 122
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,887,924
Number of Sequences: 37544
Number of extensions: 348907
Number of successful extensions: 1791
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1735
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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