Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_P05
         (913 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0412 + 3675767-3676069,3676627-3677877                           33   0.42 
05_07_0209 + 28420008-28421510                                         31   1.7  
01_05_0654 + 23965868-23967718                                         29   5.1  
09_03_0179 - 13131404-13131514,13131834-13131920,13132316-131324...    28   9.0  
03_06_0340 + 33252677-33252864,33253086-33254442,33254565-332546...    28   9.0  
01_01_0885 + 6966700-6966979,6967930-6968110,6968224-6968365,696...    28   9.0  

>08_01_0412 + 3675767-3676069,3676627-3677877
          Length = 517

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 16/42 (38%), Positives = 26/42 (61%)
 Frame = +3

Query: 474 CXLNIVYPHILTASLSEASKFCPRMLRTLILKGLMPDIXTFT 599
           C  + VY  +L A + +A  + P +LR +IL+G MPD  T++
Sbjct: 467 CRNSFVYNTLLKAHV-KAKVYEPDLLRAMILRGAMPDAETYS 507


>05_07_0209 + 28420008-28421510
          Length = 500

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = -2

Query: 714 QIXXFGGLXXGVGYNXGLIILWWNXNFLISVSVXRVTA 601
           Q+  F G   GV  N G + L W+   L S S  R TA
Sbjct: 420 QLREFSGAGFGVQENGGFLTLTWHSQRLYSASAWRATA 457


>01_05_0654 + 23965868-23967718
          Length = 616

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 631 NIRISXAGNRHVNVXISGISPLRISVLSILGQNLDASLKEAVR 503
           N RI  A +    + + G+ P R+SVLS L  + D  + +  R
Sbjct: 257 NGRIDEAADLFYEMRVEGVLPTRVSVLSFLSASADLEVLDGGR 299


>09_03_0179 -
           13131404-13131514,13131834-13131920,13132316-13132448,
           13133079-13133319,13133423-13133540,13133546-13133731,
           13133864-13134049,13134443-13134652,13135171-13135347,
           13135823-13135964,13136385-13136927,13137565-13138022
          Length = 863

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +2

Query: 164 ADVVTESELRAEFDELYLIDKNNKKSQDI 250
           AD V + +L++E +ELY   K+N+ S D+
Sbjct: 201 ADAVEDMQLQSEREELYSTVKSNRLSDDL 229


>03_06_0340 +
           33252677-33252864,33253086-33254442,33254565-33254667,
           33256081-33256171,33257208-33257300,33258316-33258471,
           33258583-33258655
          Length = 686

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +2

Query: 86  DGRVITIYIKNNMFVISPGAHLSFVVADVVTESELRAEFDELYLIDKNNKKSQ 244
           DG ++TI  K  M +++P       +  V+T  ++   +DE   I K   +SQ
Sbjct: 213 DGWLVTIDDKCEMHLLNPVTREQMALPPVITMEQVNPTYDESGAIVKYENRSQ 265


>01_01_0885 +
           6966700-6966979,6967930-6968110,6968224-6968365,
           6968448-6968517,6968617-6968783
          Length = 279

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = -2

Query: 756 GGMGVYTXFKVVGXQIXXFGGLXXGVGYNXGLIILWWNXNFLISVSVXRV 607
           G   ++  F+++G  +  F  +  G+ ++ GL+ LW N +  I+ S  R+
Sbjct: 112 GATAIWILFELLGYHLLTF--VCHGLIFSLGLLFLWSNASSFINKSPPRI 159


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,394,077
Number of Sequences: 37544
Number of extensions: 338652
Number of successful extensions: 763
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)