Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_P05
         (913 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051576-1|AAK93000.1|  606|Drosophila melanogaster GH22690p pro...    32   0.95 
AE014135-101|AAF59332.2|  606|Drosophila melanogaster CG1909-PB,...    32   0.95 
AE014135-100|AAF59333.2|  606|Drosophila melanogaster CG1909-PA,...    32   0.95 
Z70277-1|CAA94241.1|  603|Drosophila melanogaster replication pr...    29   8.8  
AY069331-1|AAL39476.1|  603|Drosophila melanogaster LD04815p pro...    29   8.8  
AE014297-719|AAF54206.1|  603|Drosophila melanogaster CG9633-PA ...    29   8.8  

>AY051576-1|AAK93000.1|  606|Drosophila melanogaster GH22690p
           protein.
          Length = 606

 Score = 32.3 bits (70), Expect = 0.95
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 315 AFKNFRSYLKQTCPXKDPIQIFGYLWASH 401
           A + +RS LK TC  +D  Q+ GYL+ +H
Sbjct: 113 AVRTWRSALKGTCQREDCFQLLGYLYQAH 141


>AE014135-101|AAF59332.2|  606|Drosophila melanogaster CG1909-PB,
           isoform B protein.
          Length = 606

 Score = 32.3 bits (70), Expect = 0.95
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 315 AFKNFRSYLKQTCPXKDPIQIFGYLWASH 401
           A + +RS LK TC  +D  Q+ GYL+ +H
Sbjct: 113 AVRTWRSALKGTCQREDCFQLLGYLYQAH 141


>AE014135-100|AAF59333.2|  606|Drosophila melanogaster CG1909-PA,
           isoform A protein.
          Length = 606

 Score = 32.3 bits (70), Expect = 0.95
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 315 AFKNFRSYLKQTCPXKDPIQIFGYLWASH 401
           A + +RS LK TC  +D  Q+ GYL+ +H
Sbjct: 113 AVRTWRSALKGTCQREDCFQLLGYLYQAH 141


>Z70277-1|CAA94241.1|  603|Drosophila melanogaster replication
           protein A protein.
          Length = 603

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +2

Query: 53  LDKFKFDLINYDGRVITIYIKNNMFVISPGAHLSFVVADVVT-ESELRAEFDELYLIDKN 229
           LDK+   L+  DG    + I + + V++PGA +   + + VT E+  + +      +  N
Sbjct: 79  LDKYVTSLVGKDGAGKRVLIISELTVVNPGAEVKSKIGEPVTYENAAKQDLAPKPAVTSN 138

Query: 230 NK 235
           +K
Sbjct: 139 SK 140


>AY069331-1|AAL39476.1|  603|Drosophila melanogaster LD04815p
           protein.
          Length = 603

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +2

Query: 53  LDKFKFDLINYDGRVITIYIKNNMFVISPGAHLSFVVADVVT-ESELRAEFDELYLIDKN 229
           LDK+   L+  DG    + I + + V++PGA +   + + VT E+  + +      +  N
Sbjct: 79  LDKYVTSLVGKDGAGKRVLIISELTVVNPGAEVKSKIGEPVTYENAAKQDLAPKPAVTSN 138

Query: 230 NK 235
           +K
Sbjct: 139 SK 140


>AE014297-719|AAF54206.1|  603|Drosophila melanogaster CG9633-PA
           protein.
          Length = 603

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +2

Query: 53  LDKFKFDLINYDGRVITIYIKNNMFVISPGAHLSFVVADVVT-ESELRAEFDELYLIDKN 229
           LDK+   L+  DG    + I + + V++PGA +   + + VT E+  + +      +  N
Sbjct: 79  LDKYVTSLVGKDGAGKRVLIISELTVVNPGAEVKSKIGEPVTYENAAKQDLAPKPAVTSN 138

Query: 230 NK 235
           +K
Sbjct: 139 SK 140


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,868,710
Number of Sequences: 53049
Number of extensions: 598975
Number of successful extensions: 1380
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4464466254
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)