Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_P02
(850 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4KTB1 Cluster: S30-ubiquitin-like; n=4; Metazoa|Rep: S... 55 3e-06
UniRef50_Q18231 Cluster: Ribosomal protein, small subunit protei... 50 6e-05
UniRef50_P62861 Cluster: 40S ribosomal protein S30; n=74; root|R... 50 6e-05
UniRef50_Q9W6Y0 Cluster: 40S ribosomal protein S30; n=30; Eukary... 48 2e-04
UniRef50_O42952 Cluster: 40S ribosomal protein S30; n=37; Eukary... 47 5e-04
UniRef50_P49689 Cluster: 40S ribosomal protein S30; n=4; Magnoli... 46 0.001
UniRef50_A1DL63 Cluster: Ribosomal S30/ubiquitin fusion; n=2; Tr... 45 0.003
UniRef50_Q4Q7P0 Cluster: 40S ribosomal protein S30, putative; n=... 44 0.004
UniRef50_UPI0000F33F66 Cluster: UPI0000F33F66 related cluster; n... 44 0.005
UniRef50_A0CN43 Cluster: Chromosome undetermined scaffold_22, wh... 39 0.18
UniRef50_UPI0001509BA5 Cluster: Ribosomal protein S30 containing... 38 0.32
UniRef50_UPI0000EB013B Cluster: UPI0000EB013B related cluster; n... 38 0.32
UniRef50_Q3LW43 Cluster: Ribosomal protein S30; n=1; Bigelowiell... 36 1.3
UniRef50_UPI00004990C9 Cluster: 40S ribosomal protein S30; n=2; ... 35 3.0
UniRef50_A0RV16 Cluster: Ribosomal protein S30E; n=2; Thermoprot... 34 3.9
UniRef50_UPI00005A3817 Cluster: PREDICTED: similar to UBIQUITIN-... 34 5.2
UniRef50_Q7XUY7 Cluster: OSJNBb0048E02.10 protein; n=3; Oryza sa... 33 6.9
>UniRef50_Q4KTB1 Cluster: S30-ubiquitin-like; n=4; Metazoa|Rep:
S30-ubiquitin-like - Suberites domuncula (Sponge)
Length = 134
Score = 54.8 bits (126), Expect = 3e-06
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = +1
Query: 277 VPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRA 390
V ++GGKVHGSLARAGKV+GQTPKVE TGRA
Sbjct: 68 VRVVGGKVHGSLARAGKVRGQTPKVEAQEKKKKKTGRA 105
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +2
Query: 395 RRIQYNRRFVNVVXTFGRRRGPNSNS 472
RR+QYNRRFVNVV FGRRRGPNSN+
Sbjct: 107 RRMQYNRRFVNVVAQFGRRRGPNSNA 132
>UniRef50_Q18231 Cluster: Ribosomal protein, small subunit protein
30; n=3; Caenorhabditis|Rep: Ribosomal protein, small
subunit protein 30 - Caenorhabditis elegans
Length = 130
Score = 50.4 bits (115), Expect = 6e-05
Identities = 24/36 (66%), Positives = 26/36 (72%)
Frame = +1
Query: 283 LLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRA 390
LLGGKVHGSLARAGKV+ QTPKV+ GRA
Sbjct: 68 LLGGKVHGSLARAGKVRAQTPKVDKQDKKKKKRGRA 103
Score = 41.5 bits (93), Expect = 0.026
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +2
Query: 395 RRIQYNRRFVNVVXTFGRRRGPNSNS 472
RR+QY RR+VNV G++RGPNSNS
Sbjct: 105 RRVQYTRRYVNVASGPGKKRGPNSNS 130
>UniRef50_P62861 Cluster: 40S ribosomal protein S30; n=74; root|Rep:
40S ribosomal protein S30 - Homo sapiens (Human)
Length = 59
Score = 50.4 bits (115), Expect = 6e-05
Identities = 20/26 (76%), Positives = 25/26 (96%)
Frame = +2
Query: 395 RRIQYNRRFVNVVXTFGRRRGPNSNS 472
RR+QYNRRFVNVV TFG+++GPN+NS
Sbjct: 34 RRMQYNRRFVNVVPTFGKKKGPNANS 59
Score = 46.0 bits (104), Expect = 0.001
Identities = 22/32 (68%), Positives = 23/32 (71%)
Frame = +1
Query: 295 KVHGSLARAGKVKGQTPKVEXXXXXXXXTGRA 390
KVHGSLARAGKV+GQTPKV TGRA
Sbjct: 1 KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRA 32
>UniRef50_Q9W6Y0 Cluster: 40S ribosomal protein S30; n=30;
Eukaryota|Rep: 40S ribosomal protein S30 - Oryzias
latipes (Medaka fish) (Japanese ricefish)
Length = 59
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/26 (76%), Positives = 24/26 (92%)
Frame = +2
Query: 395 RRIQYNRRFVNVVXTFGRRRGPNSNS 472
RRIQYNRRFVNVV TFG+++G N+NS
Sbjct: 34 RRIQYNRRFVNVVPTFGKKKGANANS 59
Score = 42.7 bits (96), Expect = 0.011
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = +1
Query: 295 KVHGSLARAGKVKGQTPKVEXXXXXXXXTGRA 390
KVHGSLARAGKV+GQTP V+ GRA
Sbjct: 1 KVHGSLARAGKVRGQTPNVDKHEEKEEEDGRA 32
>UniRef50_O42952 Cluster: 40S ribosomal protein S30; n=37;
Eukaryota|Rep: 40S ribosomal protein S30 -
Schizosaccharomyces pombe (Fission yeast)
Length = 61
Score = 47.2 bits (107), Expect = 5e-04
Identities = 23/33 (69%), Positives = 23/33 (69%)
Frame = +1
Query: 292 GKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRA 390
GKVHGSLARAGKVK QTPKVE GRA
Sbjct: 2 GKVHGSLARAGKVKSQTPKVEKQEKPKQPKGRA 34
>UniRef50_P49689 Cluster: 40S ribosomal protein S30; n=4;
Magnoliophyta|Rep: 40S ribosomal protein S30 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 62
Score = 46.4 bits (105), Expect = 0.001
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = +1
Query: 292 GKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAN 393
GKVHGSLARAGKV+GQTPKV GRA+
Sbjct: 2 GKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAH 35
Score = 39.5 bits (88), Expect = 0.10
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +2
Query: 395 RRIQYNRRFVNVVXTFGRRRGPNSN 469
+R+Q+NRRFV V FG++RGPNS+
Sbjct: 36 KRLQHNRRFVTAVVGFGKKRGPNSS 60
>UniRef50_A1DL63 Cluster: Ribosomal S30/ubiquitin fusion; n=2;
Trichocomaceae|Rep: Ribosomal S30/ubiquitin fusion -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 78
Score = 44.8 bits (101), Expect = 0.003
Identities = 22/33 (66%), Positives = 22/33 (66%)
Frame = +1
Query: 292 GKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRA 390
GKVHGSLARAGKVK TPKVE GRA
Sbjct: 2 GKVHGSLARAGKVKSATPKVEKQEKKKEPKGRA 34
>UniRef50_Q4Q7P0 Cluster: 40S ribosomal protein S30, putative; n=4;
Leishmania|Rep: 40S ribosomal protein S30, putative -
Leishmania major
Length = 66
Score = 44.4 bits (100), Expect = 0.004
Identities = 21/33 (63%), Positives = 22/33 (66%)
Frame = +1
Query: 292 GKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRA 390
GK+HGSLARAGKVK QTPKV GRA
Sbjct: 2 GKIHGSLARAGKVKNQTPKVAKQEKPKQPRGRA 34
>UniRef50_UPI0000F33F66 Cluster: UPI0000F33F66 related cluster; n=3;
Laurasiatheria|Rep: UPI0000F33F66 UniRef100 entry - Bos
Taurus
Length = 128
Score = 44.0 bits (99), Expect = 0.005
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +1
Query: 283 LLGGKVHGSLARAGKVKGQTPKVE 354
+LGGKVHGSL AGKV+GQTPKV+
Sbjct: 68 MLGGKVHGSLDCAGKVRGQTPKVD 91
>UniRef50_A0CN43 Cluster: Chromosome undetermined scaffold_22, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_22,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 92
Score = 38.7 bits (86), Expect = 0.18
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +1
Query: 292 GKVHGSLARAGKVKGQTPKVE 354
GK+HG+LA+AGKV+ QTPK+E
Sbjct: 2 GKLHGTLAKAGKVRKQTPKIE 22
>UniRef50_UPI0001509BA5 Cluster: Ribosomal protein S30 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S30 containing protein - Tetrahymena
thermophila SB210
Length = 80
Score = 37.9 bits (84), Expect = 0.32
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +1
Query: 292 GKVHGSLARAGKVKGQTPKVE 354
G++HG+LA+AGKV+ QTPKVE
Sbjct: 2 GRMHGTLAKAGKVRKQTPKVE 22
>UniRef50_UPI0000EB013B Cluster: UPI0000EB013B related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB013B UniRef100
entry - Canis familiaris
Length = 109
Score = 37.9 bits (84), Expect = 0.32
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 81 MQLHIRGQSTHVLDVNGQESIGXIKERIRTLAAVGDEDLTLSLCG 215
MQL + Q H L+V GQE++ IK + +L ++ ED + L G
Sbjct: 1 MQLFVWTQELHTLEVTGQETVTQIKTYVASLESIAPEDQVMLLAG 45
>UniRef50_Q3LW43 Cluster: Ribosomal protein S30; n=1; Bigelowiella
natans|Rep: Ribosomal protein S30 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 55
Score = 35.9 bits (79), Expect = 1.3
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +1
Query: 292 GKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRA 390
GKVHGSL RAGKV+ QT + +GRA
Sbjct: 2 GKVHGSLTRAGKVRNQTKFIAKSDKKVKNSGRA 34
>UniRef50_UPI00004990C9 Cluster: 40S ribosomal protein S30; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S30 - Entamoeba histolytica HM-1:IMSS
Length = 64
Score = 34.7 bits (76), Expect = 3.0
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +1
Query: 292 GKVHGSLARAGKVKGQTPKVE 354
GKVHG L RAGKV+ QT K E
Sbjct: 2 GKVHGGLTRAGKVRNQTKKPE 22
>UniRef50_A0RV16 Cluster: Ribosomal protein S30E; n=2;
Thermoprotei|Rep: Ribosomal protein S30E - Cenarchaeum
symbiosum
Length = 60
Score = 34.3 bits (75), Expect = 3.9
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1
Query: 301 HGSLARAGKVKGQTPKVE 354
HGSL +AGKV+ QTPK+E
Sbjct: 4 HGSLTKAGKVRSQTPKIE 21
>UniRef50_UPI00005A3817 Cluster: PREDICTED: similar to
UBIQUITIN-LIKE PROTEIN FUBI; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to UBIQUITIN-LIKE
PROTEIN FUBI - Canis familiaris
Length = 166
Score = 33.9 bits (74), Expect = 5.2
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 78 NMQLHIRGQSTHVLDVNGQESIGXIKERIRTLAAVGDEDLTLSLCGAP 221
++QL +R H L+V G E+ IK + +L ED + L G+P
Sbjct: 16 DVQLLVRAWELHTLEVTGLEAFAHIKTHVASLEGHTTEDKVVLLAGSP 63
>UniRef50_Q7XUY7 Cluster: OSJNBb0048E02.10 protein; n=3; Oryza
sativa|Rep: OSJNBb0048E02.10 protein - Oryza sativa
subsp. japonica (Rice)
Length = 423
Score = 33.5 bits (73), Expect = 6.9
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 98 RAIDTRPGRQWPGVHWSXQGTHSYSCCSWR*RPYSIIMWS 217
+A+ RP PG+HW+ Q YS CS P I MW+
Sbjct: 368 KAMSMRPDAH-PGIHWNNQWMRGYSDCSHWCLPGPIDMWN 406
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,832,027
Number of Sequences: 1657284
Number of extensions: 11142840
Number of successful extensions: 17278
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 16829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17270
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74603367202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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