Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_P02
         (850 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071683-1|AAL49305.2|  147|Drosophila melanogaster RH08962p pro...    61   2e-09
AE014297-2878|AAN13838.1|  132|Drosophila melanogaster CG15697-P...    61   2e-09
AE014297-2877|AAF55815.1|  132|Drosophila melanogaster CG15697-P...    61   2e-09

>AY071683-1|AAL49305.2|  147|Drosophila melanogaster RH08962p
           protein.
          Length = 147

 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 28/38 (73%), Positives = 30/38 (78%)
 Frame = +1

Query: 277 VPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRA 390
           +P+LGGKVHGSLARAGKVKGQTPKVE        TGRA
Sbjct: 82  IPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRA 119



 Score = 50.4 bits (115), Expect = 3e-06
 Identities = 22/26 (84%), Positives = 23/26 (88%)
 Frame = +2

Query: 395 RRIQYNRRFVNVVXTFGRRRGPNSNS 472
           RRIQYNRRFVN V  FGRRRGPN+NS
Sbjct: 121 RRIQYNRRFVNFVQGFGRRRGPNANS 146


>AE014297-2878|AAN13838.1|  132|Drosophila melanogaster CG15697-PB,
           isoform B protein.
          Length = 132

 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 28/38 (73%), Positives = 30/38 (78%)
 Frame = +1

Query: 277 VPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRA 390
           +P+LGGKVHGSLARAGKVKGQTPKVE        TGRA
Sbjct: 67  IPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRA 104



 Score = 50.4 bits (115), Expect = 3e-06
 Identities = 22/26 (84%), Positives = 23/26 (88%)
 Frame = +2

Query: 395 RRIQYNRRFVNVVXTFGRRRGPNSNS 472
           RRIQYNRRFVN V  FGRRRGPN+NS
Sbjct: 106 RRIQYNRRFVNFVQGFGRRRGPNANS 131


>AE014297-2877|AAF55815.1|  132|Drosophila melanogaster CG15697-PA,
           isoform A protein.
          Length = 132

 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 28/38 (73%), Positives = 30/38 (78%)
 Frame = +1

Query: 277 VPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRA 390
           +P+LGGKVHGSLARAGKVKGQTPKVE        TGRA
Sbjct: 67  IPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRA 104



 Score = 50.4 bits (115), Expect = 3e-06
 Identities = 22/26 (84%), Positives = 23/26 (88%)
 Frame = +2

Query: 395 RRIQYNRRFVNVVXTFGRRRGPNSNS 472
           RRIQYNRRFVN V  FGRRRGPN+NS
Sbjct: 106 RRIQYNRRFVNFVQGFGRRRGPNANS 131


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,225,671
Number of Sequences: 53049
Number of extensions: 615846
Number of successful extensions: 927
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)