Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_O16
         (1319 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1174 - 26696869-26698191                                         30   3.5  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   8.2  
07_03_1147 + 24349811-24350161,24351031-24351366,24353260-243533...    29   8.2  

>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 714 PXXPXTIPPXPPXXPXXPPP 773
           P  P ++PP PP  P  PPP
Sbjct: 146 PQPPPSLPPPPPPPPPPPPP 165


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 714 PXXPXTIPPXPPXXPXXPPP 773
           P  P + PP PP  P  PPP
Sbjct: 114 PSPPPSAPPPPPPPPTQPPP 133


>07_03_1147 +
           24349811-24350161,24351031-24351366,24353260-24353376,
           24353585-24353647,24354066-24354139,24354216-24354306,
           24354791-24354850,24355270-24355462,24356242-24356522,
           24357435-24357536,24357664-24357774,24358410-24358475,
           24358562-24358660,24358757-24358788,24359171-24359274,
           24359380-24359507,24359625-24359756,24360051-24360359,
           24360887-24361071,24361161-24361263,24361407-24361552,
           24361748-24361827,24361901-24362103
          Length = 1121

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 714 PXXPXTIPPXPPXXPXXPP 770
           P  P T+PP PP  P  PP
Sbjct: 56  PPPPRTLPPPPPPPPPQPP 74


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,536,652
Number of Sequences: 37544
Number of extensions: 122094
Number of successful extensions: 1170
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4132076460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)