Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_O15
(930 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 31 1.6
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 31 1.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.1
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 30 2.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 3.6
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 4.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 4.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 4.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 4.7
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 6.3
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 6.3
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 28 8.3
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 8.3
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 766 PXNPXTAPXXRPPPPXPP 819
P +P TAP PPPP PP
Sbjct: 782 PPSPLTAPIPPPPPPPPP 799
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 766 PXNPXTAPXXRPPPPXPP 819
P +P TAP PPPP PP
Sbjct: 681 PPSPLTAPIPPPPPPPPP 698
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +1
Query: 691 PXPPXLRAXXXXXXXXXXPRRXTXPPXNPXTAPXXRPPPPXP 816
P PP R PRR P +P P PP P P
Sbjct: 139 PPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEP 180
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +1
Query: 673 PPTPXXPXPPXLRAXXXXXXXXXXPRRXTXPPXNPXTAPXXRPPPPXPP 819
PP P P P R+ P PP P +P R PP PP
Sbjct: 141 PPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTP-PSPEPRNPPRTPP 188
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 763 PPXNPXTAPXXRPPPPXPPXT 825
PP P T P PPP PP T
Sbjct: 143 PPRVPRTPPPRSPPPRRPPMT 163
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +1
Query: 673 PPTPXXPXPPXLRAXXXXXXXXXXPRRXTXPPXNPXTAPXXRPPPPXPP 819
PP P PP + A P PP P PPPP PP
Sbjct: 536 PPVSSIPPPPPI-AGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPP 583
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/57 (28%), Positives = 18/57 (31%), Gaps = 1/57 (1%)
Frame = +1
Query: 763 PPXNPXTAPXXRPPPPXPPXTXXXAXXXXXXXXXXXXKLXXAPXPPXXT-XXPXLPP 930
P P P PPPP PP + AP PP P +PP
Sbjct: 155 PTPIPTPVPILEPPPPPPPVPPLSPLYKVLEIPATPSPIFVAPLPPPPAYTTPDVPP 211
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +1
Query: 673 PPTPXXPXPPXLRAXXXXXXXXXXPRRXTXPPXNPXTAPXXRPPPPXP 816
PP P PP P PP P P PPPP P
Sbjct: 33 PPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/53 (32%), Positives = 18/53 (33%), Gaps = 4/53 (7%)
Frame = +1
Query: 673 PPTPXXPXPPXLRAXXXXXXXXXXPRRXTXPPXNPXTAPXXR----PPPPXPP 819
PP P P PP P + PP P P PPPP PP
Sbjct: 765 PPPPPPPPPPHCEPTMVHVEFTP-PSTSSVPPPPPPLPPISSGAPPPPPPPPP 816
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/53 (32%), Positives = 18/53 (33%), Gaps = 4/53 (7%)
Frame = +1
Query: 673 PPTPXXPXPPXLRAXXXXXXXXXXPRRXTXPPXNPXTAPXXR----PPPPXPP 819
PP P P PP P + PP P P PPPP PP
Sbjct: 765 PPPPPPPPPPHCEPTMVHVEFTP-PSTSSVPPPPPPLPPISSGAPPPPPPPPP 816
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +1
Query: 673 PPTPXXPXPPXLRAXXXXXXXXXXPRRXTXPPXNPXTAPXXRPPPPXPP 819
PP P PP P PP P P PPPP PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP-PPPPPGGCPPPPPPP 775
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +1
Query: 673 PPTPXXPXPPXLRAXXXXXXXXXXPRRXTXPPXNPXTAPXXRPPPPXPP 819
PP P PP P PP P P PPPP PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP-PPPPPGGCPPPPPPP 775
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +1
Query: 673 PPTPXXPXPPXLRAXXXXXXXXXXPRRXTXPPXNPXTAPXXRPPPPXPP 819
PP P PP P PP P P PPPP PP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP-PPPPPGGCPPPPPPP 358
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +1
Query: 673 PPTPXXPXPPXLRAXXXXXXXXXXPRRXTXPPXNPXTAPXXRPPPPXPP 819
PP P P PP P PP P AP PPPP P
Sbjct: 85 PPAPLPPPPPPASPCCGPSPV---PAPCCPPPPAP-AAPCCPPPPPPTP 129
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 745 PRRXTXPPXNPXTAPXXRPPPPXPP 819
P R PP P P PPPP P
Sbjct: 128 PPRTCCPPPTPAAPPPPPPPPPPAP 152
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = +1
Query: 673 PPTPXXPXPPXLRAXXXXXXXXXXPRRXTX-PPXNPXTAPXXRPPPPXPP 819
P T P PP P T PP AP PPPP PP
Sbjct: 318 PTTFILPPPPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPPPPPPP 367
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 763 PPXNPXTAPXXRPPPPXPP 819
PP P P PPPP PP
Sbjct: 493 PPLPPIATPSSVPPPPPPP 511
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 763 PPXNPXTAPXXRPPPPXPP 819
PP P P PPPP PP
Sbjct: 500 PPLPPIATPSSVPPPPPPP 518
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,392,827
Number of Sequences: 27780
Number of extensions: 133542
Number of successful extensions: 1123
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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