Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_O08
(865 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC63.10c |||dolichol kinase |Schizosaccharomyces pombe|chr 3||... 33 0.052
SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomy... 30 0.49
SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster... 29 0.85
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 28 2.0
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 27 2.6
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 27 3.4
SPBC800.02 |whi5|mug54|cell cycle transcriptional repressor Whi5... 27 4.5
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 27 4.5
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 4.5
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 26 6.0
SPBC13A2.04c |||PTR family peptide transporter|Schizosaccharomyc... 26 6.0
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 26 6.0
>SPCC63.10c |||dolichol kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 465
Score = 33.1 bits (72), Expect = 0.052
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = -3
Query: 305 NFSHIQAIWKCLFIPTGLWLAIA*NNCISISTSHFKASSCF-VSGSSSLETIFN*LIWL 132
NF I I+ LFIP +L + + IS + F +CF + GSSS+ ++ L+WL
Sbjct: 27 NFESILEIFSVLFIP---FLCNSGKKFLQISNASFFLPACFYLLGSSSIIQLYEPLLWL 82
>SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 278
Score = 29.9 bits (64), Expect = 0.49
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 467 QKSKEVLVTEETEDKDGRSPSPKSTPRSNSKGTASKDNMS-KGTRKDSISALGNENT*RK 643
+ + V+ ++ D+ PK TP SNS + + +N S K T++ S + +K
Sbjct: 211 ESAAAVIKEDKVSDRKKSKKKPKKTPVSNSTASQASENASDKKTKEKKSSGKQKIASKKK 270
Query: 644 RQLT 655
QLT
Sbjct: 271 DQLT 274
>SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 480
Score = 29.1 bits (62), Expect = 0.85
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = +2
Query: 515 GRSPSPKSTPRSNSKGTASKDN 580
G S SPKSTP SNS G A N
Sbjct: 300 GASVSPKSTPGSNSTGAAVDTN 321
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 329 ISTQDIWKHLGSLYDFTMLDEAE 397
I QD+W LG+LY+ +E E
Sbjct: 76 IKAQDVWNKLGTLYNLKEFEELE 98
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 437 PENEFGALMKQKSKEVLVTEETEDKDGRSPSPKSTPRSNS 556
PE+ F L ++K+ + +E E + +P STP+S++
Sbjct: 52 PEDPFANLFQKKTDNKISLKELERQKVGTPDSNSTPKSSN 91
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 27.1 bits (57), Expect = 3.4
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +2
Query: 440 ENEFGALMKQKSKEVLVTEETEDKDGRSPSPKSTPRSNSK 559
ENEF A S L T+ T + + SP+P STP+ SK
Sbjct: 240 ENEFLASPMDPSLSKLFTKTT-NTEKISPTPFSTPKRKSK 278
>SPBC800.02 |whi5|mug54|cell cycle transcriptional repressor
Whi5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 252
Score = 26.6 bits (56), Expect = 4.5
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +2
Query: 269 TNTSKWPVYGRNYRIQLPQEISTQDIWKHLGSLYDFTMLDEAEPIPFP 412
T ++K P++G NY I P+E D LG+ + + + ++ +PFP
Sbjct: 181 TASAKSPLFGMNYHISRPEE---TDESLRLGTA-NLSRIRKSTSLPFP 224
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 4.5
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 533 KSTPRSNSKGTASKDNMSKGTRKDSISALGNENT*RKRQLTRVYRYAE 676
K TP +SKG+ K+N+ RK + L ENT K ++ ++ + E
Sbjct: 194 KFTP--HSKGSYLKENLKSELRKGRLDELMCENTALKEKIDKLNKELE 239
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 4.5
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +2
Query: 383 LDEAEPIPFPNHEITFCLPENEFGALMKQKSKEVLVTEETEDK-DGRSPSPKSTPRSNSK 559
L A PIP ++ + A K + L E S SP++TP ++
Sbjct: 214 LSTASPIPVRTSSVSSTYLTQDREASSKNCLSKALAFSSIEPPASSASTSPRNTPTPSNN 273
Query: 560 GTASKDNMSKGTRKDS 607
GT+ N++ +S
Sbjct: 274 GTSINANVTSSLTSNS 289
>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 613
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -2
Query: 462 IKAPNSFSGKQNVIS*LGNGIGSASS-NIVKSY 367
I PN F G ++ S N +GS+SS N+V ++
Sbjct: 374 ISIPNPFQGVESANSDAANNLGSSSSLNLVDTF 406
>SPBC13A2.04c |||PTR family peptide transporter|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 618
Score = 26.2 bits (55), Expect = 6.0
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 154 MVSSEEEPETKQDDAL-KWDVDMEIQLFYAMANHKPVGINK 273
M + + E K++DAL K DV+ E+ Y+MA+ + K
Sbjct: 567 MEDEQNQLEFKRNDALTKKDVEKEVHDSYSMADESQYNLEK 607
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 26.2 bits (55), Expect = 6.0
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +2
Query: 467 QKSKEVLVTEETEDKDGRSPSPKSTPRSNSK-----GTASKDNMSKGTRKDSIS 613
Q +E L EE E++D +P P T + NS+ G ASK S+ T D S
Sbjct: 76 QVDEEELEEEEEEEEDA-TPEPVVTSKKNSRSKPKNGGASKRKASRRTVVDEDS 128
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,377,497
Number of Sequences: 5004
Number of extensions: 70914
Number of successful extensions: 198
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 430470850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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