Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_O07
(902 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.014
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 0.091
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.39
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.68
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.6
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 2.1
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.8
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 26 8.4
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.1 bits (77), Expect = 0.014
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +3
Query: 720 LXXPPHXPPPXXXXPTXXXXP-PXPXPXXGXXXPXPPPPP 836
L P PPP PT P P P P P PPPPP
Sbjct: 728 LLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 32.3 bits (70), Expect = 0.097
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +3
Query: 705 PXXEXLXXPPHXPPPXXXXPTXXXXPPXPXPXXGXXXPXPPPPPXXP 845
P + P P P PP P P G PPPPP P
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.9 bits (64), Expect = 0.52
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 779 PXPPXPXXGXXXPXPPPSTPXPXXPXPPXXXXXQPHPPAXP 901
P PP P G PPP P P P P A P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 29.5 bits (63), Expect = 0.68
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 729 PPHXPPPXXXXPTXXXXPPXPXPXXGXXXPXPPPPPXXP 845
P PPP P PP P P PPPPP P
Sbjct: 748 PIPVPPPA---PIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 0.90
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +2
Query: 776 LPXPPXPXXGXXXPXPPPSTPXPXXPXPPXXXXXQPHPP 892
L PP P P P P+ P P P P P PP
Sbjct: 729 LKSPPPPPPAVIVPTPAPA-PIPVPPPAPIMGGPPPPPP 766
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 785 PPXPXXGXXXPXPPPSTPXPXXPXPPXXXXXQPHPPA 895
PP P G P PPP P PP P PPA
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPP-----PPPPPA 784
Score = 26.2 bits (55), Expect = 6.4
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 9/50 (18%)
Frame = +2
Query: 779 PXPPXPXXGXXXPXP-----PPSTPX----PXXPXPPXXXXXQPHPPAXP 901
P PP P P P PP P P P PP P PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +3
Query: 744 PPXXXXPTXXXXPPXPXPXXGXXXPXPPPPP 836
PP P P P P PPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 25.0 bits (52), Expect(3) = 0.091
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 780 PPXPXPXXGXXXPXPPPPP 836
PP P P PPPPP
Sbjct: 224 PPTYTPKQADPLPAPPPPP 242
Score = 22.6 bits (46), Expect(3) = 0.091
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 816 PXPPPPPXXP 845
P PPPPP P
Sbjct: 238 PPPPPPPTLP 247
Score = 21.4 bits (43), Expect(3) = 0.091
Identities = 8/23 (34%), Positives = 9/23 (39%)
Frame = +3
Query: 729 PPHXPPPXXXXPTXXXXPPXPXP 797
PP P P+ PP P P
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPP 195
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.3 bits (65), Expect = 0.39
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 780 PPXPXPXXGXXXPXPPPPPXXP 845
PP P P G P PPPP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 824 PPSTPXPXXPXPPXXXXXQPHPPAXP 901
PP P P P P QP PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 729 PPHXPPPXXXXPTXXXXPPXPXPXXGXXXPXPPPPP 836
PP PPP PP P P PPPPP
Sbjct: 5 PPGNPPP----------PPPPPGFEPPSQPPPPPPP 30
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 0.68
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +2
Query: 785 PPXPXXGXXXPXPPPSTPXPXXPXPPXXXXXQPHPPAXP 901
PP P P P PS P P P P P P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAP 1121
Score = 29.1 bits (62), Expect = 0.90
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 785 PPXPXXGXXXPXPPPSTPXPXXPXPPXXXXXQPHPPA 895
PP P P P PS P P P P P A
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAA 1186
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = +2
Query: 785 PPXPXXGXXXPXPPPSTPXPXXPXPPXXXXXQPHPPAXP 901
PP P P PP + P P P P P P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +2
Query: 785 PPXPXXGXXXPXPPPSTPXPXXPXPPXXXXXQPHP 889
PP P P P PS P P P P P
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 26.6 bits (56), Expect = 4.8
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 779 PXPPXPXXGXXXPXPPPSTPXPXXPXPPXXXXXQPHPPA 895
P P P G P PPPST P P P P P A
Sbjct: 1198 PPVPKPSVGVP-PVPPPSTA-PPVPTPSAGLPPVPVPTA 1234
Score = 25.8 bits (54), Expect = 8.4
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 785 PPXPXXGXXXPXPPPSTPXPXXPXP 859
PP P P P PS P P P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVP 1136
Score = 25.8 bits (54), Expect = 8.4
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 785 PPXPXXGXXXPXPPPSTPXPXXPXP 859
PP P P P PS P P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAP 1155
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +3
Query: 729 PPHXPPPXXXXPTXXXXPPXPXPXXGXXXPXPPPPP 836
PP P P PP P P PPPP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 24.2 bits (50), Expect(2) = 1.6
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 788 PXPXXGXXXPXPPPSTPXPXXPXPPXXXXXQPHP 889
P P P PPS P P P P P+P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPP--PLPASSAPSVPNP 1746
Score = 22.2 bits (45), Expect(2) = 1.6
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +2
Query: 656 PTPARPXRXTXPPPXXP 706
PTP P PPP P
Sbjct: 1705 PTPPPPPMSVPPPPSAP 1721
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 744 PPXXXXPTXXXXPPXPXPXXGXXXPXPPPPPXXP 845
PP P P P G P PPPP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = +2
Query: 785 PPXPXXGXXXPXPPPSTPXPXXP-XPPXXXXXQPHPPAXP 901
PP P P PPS P P P P PP+ P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 785 PPXPXXGXXXPXPPPSTPXPXXPXPPXXXXXQPHPPAXP 901
P P P PPS P P P P PPA P
Sbjct: 437 PSLPMGAPAAPPLPPSAPIAP-PLPAGMPAAPPLPPAAP 474
Score = 25.8 bits (54), Expect = 8.4
Identities = 11/32 (34%), Positives = 11/32 (34%)
Frame = +3
Query: 741 PPPXXXXPTXXXXPPXPXPXXGXXXPXPPPPP 836
PPP PP P PPPPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 25.8 bits (54), Expect = 8.4
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 3/41 (7%)
Frame = +2
Query: 788 PXPXXGXXXPXPPPSTPXPXX---PXPPXXXXXQPHPPAXP 901
P P G P PPP P P P +PPA P
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP 392
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 4.8
Identities = 20/79 (25%), Positives = 20/79 (25%), Gaps = 3/79 (3%)
Frame = +2
Query: 635 SCRPSLXPTPARPXRXTXPPPXXPXRXXXXXXXXXXXXXXXYXHXXX---LPXPPXPXXG 805
S P P P P PP P R LP P P
Sbjct: 121 SAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Query: 806 XXXPXPPPSTPXPXXPXPP 862
P PS P P PP
Sbjct: 181 VKSPPSAPSLPSAVPPMPP 199
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/47 (27%), Positives = 14/47 (29%)
Frame = +3
Query: 705 PXXEXLXXPPHXPPPXXXXPTXXXXPPXPXPXXGXXXPXPPPPPXXP 845
P + PP PP P P P P PPP P
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Frame = +2
Query: 815 PXPPPSTPXPXXPXPPXXXXXQP---HPPAXP 901
P PPP+ P P P QP PPA P
Sbjct: 49 PLPPPTRRLPRKPLPFRSTSLQPPSSQPPAPP 80
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,243,834
Number of Sequences: 5004
Number of extensions: 35280
Number of successful extensions: 277
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 214
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 456499320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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