Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_O05
         (913 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0486 - 3455030-3455770                                           30   2.9  
03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565...    29   3.9  
03_02_0542 - 9348126-9349585,9352433-9352655                           29   5.1  
04_04_0774 + 27986999-27987278,27987380-27987496,27987605-279877...    29   6.8  

>06_01_0486 - 3455030-3455770
          Length = 246

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -1

Query: 190 PSFRPYVPPYLLPDES*YAKAPTP 119
           P   PYVPPY+ P    Y   PTP
Sbjct: 106 PPTPPYVPPYIPPPTPPYVPPPTP 129


>03_05_0754 + 27452203-27452242,27452360-27455611,27456480-27456533,
            27456774-27456872,27456948-27457012,27457476-27457575,
            27458326-27458408,27458494-27458569,27458920-27459698
          Length = 1515

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -2

Query: 447  GINGSNLVTETRASRGSGERAELIXIVLHRGELFVGESGRWEI 319
            G+NG     E   +RG   R E + +V H GEL VG     E+
Sbjct: 1382 GVNGGG--DEHPEARGRPRRPEAVVLVAHVGELLVGGDRHQEV 1422


>03_02_0542 - 9348126-9349585,9352433-9352655
          Length = 560

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +2

Query: 137 VSRFIRQ*VRRYIRPERRGCRRQTRRL 217
           V   +R+ +R+Y RPE RG +R  RRL
Sbjct: 254 VKHLVREFLRKYKRPEIRGDQRALRRL 280


>04_04_0774 +
           27986999-27987278,27987380-27987496,27987605-27987759,
           27987855-27987929,27988025-27988321,27988448-27988780,
           27988880-27988996
          Length = 457

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = -1

Query: 178 PYVPPYLLPDES*YAKAPTPLLLGRADELNNGRRFDNEPSEGKTQNLKE 32
           PY  PY        AKAP P LL +      G   D +  +G+ Q +KE
Sbjct: 52  PYGSPYPRWPVCSIAKAPPPPLLQKLGAARRGAGRDRKAGDGELQLIKE 100


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,731,707
Number of Sequences: 37544
Number of extensions: 380065
Number of successful extensions: 1003
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)