Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_N19
(914 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 36 0.040
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 36 0.040
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 34 0.12
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.12
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.12
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.12
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 34 0.16
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.28
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.28
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.28
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.38
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.38
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 32 0.50
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 0.87
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 31 0.87
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 31 0.87
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 31 0.87
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 31 1.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.1
Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical pr... 30 2.7
U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific ... 30 2.7
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 30 2.7
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 30 2.7
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 30 2.7
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 29 4.6
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 4.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.6
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 6.1
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 29 6.1
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 6.1
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 29 6.1
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 28 8.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 8.1
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 35.9 bits (79), Expect = 0.040
Identities = 21/60 (35%), Positives = 21/60 (35%), Gaps = 4/60 (6%)
Frame = -1
Query: 476 GGGGXXXXXXVPXGXG----GXXXXGGEXXXPPXGRAXXXXAGXGGGXGXXXGXXGGXXG 309
GGGG P G G G GG PP G GGG G G GG G
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGG 102
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -1
Query: 476 GGGGXXXXXXVPXGXGGXXXXGGEXXXPPXGRAXXXXAGXGGGXGXXXGXXGG 318
GGGG G GG GG P G G GG G GG
Sbjct: 157 GGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGG 209
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/56 (33%), Positives = 20/56 (35%)
Frame = -1
Query: 476 GGGGXXXXXXVPXGXGGXXXXGGEXXXPPXGRAXXXXAGXGGGXGXXXGXXGGXXG 309
GGGG G GG GG G + G GGG G G GG G
Sbjct: 120 GGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCG--GGGGGGCGG 173
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 35.9 bits (79), Expect = 0.040
Identities = 21/60 (35%), Positives = 21/60 (35%), Gaps = 4/60 (6%)
Frame = -1
Query: 476 GGGGXXXXXXVPXGXG----GXXXXGGEXXXPPXGRAXXXXAGXGGGXGXXXGXXGGXXG 309
GGGG P G G G GG PP G GGG G G GG G
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGG 102
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -1
Query: 476 GGGGXXXXXXVPXGXGGXXXXGGEXXXPPXGRAXXXXAGXGGGXGXXXGXXGG 318
GGGG G GG GG P G G GG G GG
Sbjct: 157 GGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGG 209
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/56 (33%), Positives = 20/56 (35%)
Frame = -1
Query: 476 GGGGXXXXXXVPXGXGGXXXXGGEXXXPPXGRAXXXXAGXGGGXGXXXGXXGGXXG 309
GGGG G GG GG G + G GGG G G GG G
Sbjct: 120 GGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCG--GGGGGGCGG 173
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/57 (36%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = -1
Query: 476 GGGGXXXXXXVPXGXGGXXXXGGEXXXPPXGRAXXXXAGXGGGX-GXXXGXXGGXXG 309
GGGG G GG GG PP A G GGG G G GG G
Sbjct: 28 GGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGG 84
Score = 32.3 bits (70), Expect = 0.50
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -1
Query: 473 GGGXXXXXXVPXGXGGXXXXGGEXXXPPXGRAXXXXAGXGGGXGXXXGXXGGXXG 309
GGG G GG GG PP A G GGG G G GG G
Sbjct: 86 GGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGG-GCGGGCGGGGGG 139
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = +1
Query: 310 PXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P PP P PPP P GG PP PP G PPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG---PPPPPPPP 765
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/60 (35%), Positives = 21/60 (35%)
Frame = +1
Query: 298 GXXXPXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
G P P P PPP P P GG PP PP P G PPPP
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPP------PPGGCPPPPP----PPPPGGFKGGPPPPPPP 790
Score = 31.9 bits (69), Expect = 0.66
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 5/65 (7%)
Frame = +1
Query: 298 GXXXPXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPP-----XXXXPPXPXGTXXXXX 462
G P P P PPP P GG PP PP P G
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Query: 463 XPPPP 477
PPPP
Sbjct: 785 PPPPP 789
Score = 31.5 bits (68), Expect = 0.87
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = +1
Query: 343 PHPPPXPAXXXX-ALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P PPP + GG PP PP P G PPPP
Sbjct: 684 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPP 729
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = +1
Query: 310 PXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P PP P PPP P GG PP PP G PPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG---PPPPPPPP 765
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/60 (35%), Positives = 21/60 (35%)
Frame = +1
Query: 298 GXXXPXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
G P P P PPP P P GG PP PP P G PPPP
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPP------PPGGCPPPPP----PPPPGGFKGGPPPPPPP 790
Score = 31.9 bits (69), Expect = 0.66
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 5/65 (7%)
Frame = +1
Query: 298 GXXXPXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPP-----XXXXPPXPXGTXXXXX 462
G P P P PPP P GG PP PP P G
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Query: 463 XPPPP 477
PPPP
Sbjct: 785 PPPPP 789
Score = 31.5 bits (68), Expect = 0.87
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = +1
Query: 343 PHPPPXPAXXXX-ALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P PPP + GG PP PP P G PPPP
Sbjct: 684 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPP 729
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = +1
Query: 310 PXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P PP P PPP P GG PP PP G PPPP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG---PPPPPPPP 348
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/60 (35%), Positives = 21/60 (35%)
Frame = +1
Query: 298 GXXXPXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
G P P P PPP P P GG PP PP P G PPPP
Sbjct: 324 GPPPPPPPGGLPPISGGPPPPPP------PPGGCPPPPP----PPPPGGFKGGPPPPPPP 373
Score = 31.9 bits (69), Expect = 0.66
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 5/65 (7%)
Frame = +1
Query: 298 GXXXPXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPP-----XXXXPPXPXGTXXXXX 462
G P P P PPP P GG PP PP P G
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 367
Query: 463 XPPPP 477
PPPP
Sbjct: 368 PPPPP 372
Score = 31.5 bits (68), Expect = 0.87
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = +1
Query: 343 PHPPPXPAXXXX-ALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P PPP + GG PP PP P G PPPP
Sbjct: 267 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPP 312
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = +1
Query: 319 PPXXPXXXPHPPPXPAXXXXALPX--GGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
PP P P PPP A P GG PP PP P P PP
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPP 130
Score = 31.9 bits (69), Expect = 0.66
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 2/55 (3%)
Frame = +1
Query: 319 PPXXPXXXPHPPPXPAXXXXALP--XGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
PP P PPP P P GG PP P P PPPP
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 6/59 (10%)
Frame = +1
Query: 319 PPXXPXXXP------HPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
PP P P PPP PA P G PP PP P G PPPP
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG-----GSPPPP 292
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/52 (38%), Positives = 21/52 (40%)
Frame = +1
Query: 319 PPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPP 474
PP P PPP PA P G SPP PP P G+ PPP
Sbjct: 272 PPPPPTGS--PPPPPAGGSPPPPRAG---SPP---PPPPPRGSPPTGSLPPP 315
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +1
Query: 331 PXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P PPP P L G PP PP P PPPP
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP----RTGSPPPPP 276
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 6/59 (10%)
Frame = +1
Query: 319 PPXXPXXXP------HPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
PP P P PPP PA P G PP PP P G PPPP
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG-----GSPPPP 313
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/52 (38%), Positives = 21/52 (40%)
Frame = +1
Query: 319 PPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPP 474
PP P PPP PA P G SPP PP P G+ PPP
Sbjct: 293 PPPPPTGS--PPPPPAGGSPPPPRAG---SPP---PPPPPRGSPPTGSLPPP 336
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +1
Query: 331 PXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P PPP P L G PP PP P PPPP
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP----RTGSPPPPP 297
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 6/59 (10%)
Frame = +1
Query: 319 PPXXPXXXP------HPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
PP P P PPP PA P G PP PP P G PPPP
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG-----GSPPPP 298
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/52 (38%), Positives = 21/52 (40%)
Frame = +1
Query: 319 PPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPP 474
PP P PPP PA P G SPP PP P G+ PPP
Sbjct: 278 PPPPPTGS--PPPPPAGGSPPPPRAG---SPP---PPPPPRGSPPTGSLPPP 321
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +1
Query: 331 PXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P PPP P L G PP PP P PPPP
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP----RTGSPPPPP 282
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +1
Query: 298 GXXXPXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
G P PP PPP P A G PP PP P PPPP
Sbjct: 331 GGMPPPPPPGMRYPGGMPPPPPPRYPSA---GPGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
Score = 31.9 bits (69), Expect = 0.66
Identities = 18/60 (30%), Positives = 18/60 (30%), Gaps = 4/60 (6%)
Frame = +1
Query: 310 PXXPPXXPXXXPHPPPXPAXXXXAL----PXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P PP P P PPP P P PP P G PPPP
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +1
Query: 310 PXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P PP PPP P P G PP PP G PPPP
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP---PPPSRFGPPGMGGMPPPP 337
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 1/57 (1%)
Frame = +1
Query: 310 PXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXX-XPPXPXGTXXXXXXPPPP 477
P PP P P PP P P P PP P G PPPP
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPP--PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP 351
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +1
Query: 298 GXXXPXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
G P PP PPP P A G PP PP P PPPP
Sbjct: 341 GGMPPPPPPGMRYPGGMPPPPPPRYPSA---GPGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
Score = 31.9 bits (69), Expect = 0.66
Identities = 18/60 (30%), Positives = 18/60 (30%), Gaps = 4/60 (6%)
Frame = +1
Query: 310 PXXPPXXPXXXPHPPPXPAXXXXAL----PXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P PP P P PPP P P PP P G PPPP
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +1
Query: 310 PXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P PP PPP P P G PP PP G PPPP
Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP---PPPSRFGPPGMGGMPPPP 347
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 1/57 (1%)
Frame = +1
Query: 310 PXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXX-XPPXPXGTXXXXXXPPPP 477
P PP P P PP P P P PP P G PPPP
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPP--PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP 361
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 32.3 bits (70), Expect = 0.50
Identities = 20/57 (35%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = -1
Query: 476 GGGGXXXXXXVPXGXGGXXXXG-GEXXXPPXGRAXXXXAGXGGGXGXXXGXXGGXXG 309
GGGG G GG G G P G G GGG G G GG G
Sbjct: 115 GGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMG 171
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 31.5 bits (68), Expect = 0.87
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +1
Query: 298 GXXXPXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPP 474
G P P P P P P P P PP PP P PPP
Sbjct: 29 GCPTPMCQPRMPCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPP 87
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 31.5 bits (68), Expect = 0.87
Identities = 15/56 (26%), Positives = 17/56 (30%)
Frame = +1
Query: 310 PXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P P P PP P + +PP PP G PPPP
Sbjct: 201 PPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 31.5 bits (68), Expect = 0.87
Identities = 15/56 (26%), Positives = 17/56 (30%)
Frame = +1
Query: 310 PXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P P P PP P + +PP PP G PPPP
Sbjct: 187 PPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 31.5 bits (68), Expect = 0.87
Identities = 15/56 (26%), Positives = 17/56 (30%)
Frame = +1
Query: 310 PXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P P P PP P + +PP PP G PPPP
Sbjct: 187 PPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = +1
Query: 292 KXGXXXPXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPP 471
K G P P HPP P P PP PP P G P
Sbjct: 80 KPGRPGKPGAPGLPGNPGHPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGGNGNPG 139
Query: 472 PP 477
P
Sbjct: 140 SP 141
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/53 (28%), Positives = 16/53 (30%)
Frame = +1
Query: 319 PPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P P P PPP P + PP PP PPPP
Sbjct: 601 PENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPP 653
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +1
Query: 331 PXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P PPP P LP G PP PP G PP
Sbjct: 624 PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPP 672
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/53 (28%), Positives = 16/53 (30%)
Frame = +1
Query: 319 PPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P P P PPP P + PP PP PPPP
Sbjct: 427 PENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPP 479
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +1
Query: 331 PXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P PPP P LP G PP PP G PP
Sbjct: 450 PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPP 498
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +1
Query: 310 PXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P PP P PPP P P PP PP P PPPP
Sbjct: 28 PPCPPPPPPMCA-PPPLPCPPPPICPP--QFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical
protein K07F5.11 protein.
Length = 290
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -1
Query: 443 PXGXGGXXXXGGEXXXPPXGRAXXXXAGXGGGXG 342
P G GG G PP G + AG GGG G
Sbjct: 27 PAGGGGGASKVGGAGAPPPGTSVYMGAGAGGGGG 60
>U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific
family, class qprotein 2 protein.
Length = 405
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -1
Query: 443 PXGXGGXXXXGGEXXXPPXGRAXXXXAGXGGGXG 342
P G GG G PP G + AG GGG G
Sbjct: 27 PAGGGGGASKVGGGAAPPPGTSVYMGAGGGGGGG 60
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -1
Query: 476 GGGGXXXXXXVPXGXGGXXXXGGEXXXPPXGRAXXXXAGXGGGXGXXXGXXGGXXG 309
GGGG G GGE P G A G GG G G GG G
Sbjct: 503 GGGGGGHVASAGGGISAMTGAGGEA---PGGGAGGRGGGAHGGAGRGGGYQGGRGG 555
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -1
Query: 476 GGGGXXXXXXVPXGXGGXXXXGGEXXXPPXGRAXXXXAGXGGGXGXXXGXXGGXXG 309
GGGG G GGE P G A G GG G G GG G
Sbjct: 503 GGGGGGHVASAGGGISAMTGAGGEA---PGGGAGGRGGGAHGGAGRGGGYQGGRGG 555
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = +1
Query: 319 PPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
PP P PPP P L G P PP P GT PPPP
Sbjct: 158 PPPPPKGTGSPPPPPTGEPQDLSTEGNASRRP----PPPPKGT---GTPPPPP 203
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = +1
Query: 319 PPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
PP P PPP P L G P PP P GT PPPP
Sbjct: 251 PPPPPKGTGSPPPPPTGEPQDLSGEGNASRRP----PPPPKGT----GTPPPP 295
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = -1
Query: 473 GGGXXXXXXVPXGXGGXXXXGGEXXXPPXGRAXXXXAGXGGGXGXXXGXXGG 318
GGG G GG GG G G GGG G G GG
Sbjct: 91 GGGGCGGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGGGGGGYASGGSGG 142
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +1
Query: 310 PXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P PP P PPP PA P P PP P G P P
Sbjct: 130 PGKPPQSPCEPLTPPPCPACPPGP-PGAPGAPGKPGSEGPPGPPGHDGPNGGPGQP 184
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = -1
Query: 437 GXGGXXXXGGEXXXPPXGRAXXXXAGXGGGXGXXXGXXGGXXG 309
G G GG+ PP G GGG G GG G
Sbjct: 134 GGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGG 176
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +1
Query: 310 PXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P PP PPP P P G P PP P + PPPP
Sbjct: 1344 PPPPPSDDLTPVPPPPPPPPTMSKAPTG-----VPLPVPPPPPLFSPSMILPPPPP 1394
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +1
Query: 319 PPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
PP P P PPP P P P P T PPPP
Sbjct: 459 PPTTPKPAP-PPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPP 510
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +1
Query: 298 GXXXPXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXP 468
G P PP P PH P A P G P PP G P
Sbjct: 177 GEIGPPGPPAPPGPDPHSLFPPQCPCEAPPGDGGPPGQPGPDGPPGAPGNAGEDGKP 233
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +1
Query: 319 PPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
PP P P PPP P P P P T PPPP
Sbjct: 466 PPTTPKPAP-PPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPP 517
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +1
Query: 298 GXXXPXXPPXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXP 468
G P PP P PH P A P G P PP G P
Sbjct: 158 GEIGPPGPPAPPGPDPHSLFPPQCPCEAPPGDGGPPGQPGPDGPPGAPGNAGEDGKP 214
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = -1
Query: 476 GGGGXXXXXXVPXGXGGXXXXGGEXXXPPXGRAXXXXAGXGGGXGXXXGXXGGXXG 309
GGGG G GG GG + GGG G GG G
Sbjct: 788 GGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAG 843
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +1
Query: 322 PXXPXXXPHPPPXPAXXXXALPXGGXXXSPPXXXXPPXPXGTXXXXXXPPPP 477
P P PPP P A PP PP P PPPP
Sbjct: 533 PAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPP--PPLPQNLSGAPPPPPPP 582
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,756,538
Number of Sequences: 27780
Number of extensions: 83798
Number of successful extensions: 944
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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