Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_N08
         (855 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   2.7  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    23   3.6  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   6.3  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   8.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   8.3  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +3

Query: 342 YGRLSXGSYPFPTVG 386
           YGR   G Y  PTVG
Sbjct: 606 YGRFKRGKYEEPTVG 620


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = +2

Query: 773 GRGGEGFPWINX-PAQPPREKGGFPF 847
           G  G+ +  +N  P QP R+  GF F
Sbjct: 69  GMTGDAYGGLNIRPGQPSRQHAGFEF 94


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 779 GGEGFPWINXPAQPPREKG 835
           G  GFPWI+      RE+G
Sbjct: 350 GQTGFPWIDAIMTQLREEG 368


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 404 RSIFCPAYCRKRVRT 360
           +SI C  +C++R  T
Sbjct: 74  KSIICKCFCKRRTNT 88


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 404 RSIFCPAYCRKRVRT 360
           +SI C  +C++R  T
Sbjct: 522 KSIICKCFCKRRTNT 536


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,041
Number of Sequences: 438
Number of extensions: 2296
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)