Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_N03
(893 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 44 2e-04
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 41 0.001
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 40 0.003
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 40 0.003
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 38 0.008
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 37 0.019
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 36 0.033
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 36 0.043
01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911 35 0.076
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110 33 0.23
03_01_0249 - 1935355-1935827,1936129-1936330 31 1.2
12_01_0675 + 5759641-5759722,5760247-5760291,5760690-5760775,576... 30 2.2
06_01_0786 - 5881178-5881303,5881523-5881627,5882078-5882169,588... 29 6.6
02_05_1323 + 35700147-35701649 29 6.6
09_04_0448 + 17692650-17692970,17693461-17693811 28 8.7
>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 44.0 bits (99), Expect = 2e-04
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Frame = +2
Query: 191 DHRVLSADWPDFKPKTPFGQMPVLVIDGKQYA-QSTAICRYLGRKYG------LAGANDE 349
D V+ P+ + PFGQ+P DG Y +S AI +Y+ RKY L N
Sbjct: 35 DFTVMEHKSPEHLKRNPFGQIPAFQ-DGDLYLFESRAIGKYILRKYKTREADLLREGNLR 93
Query: 350 EAFEIDQNVEF-LHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANKG 526
EA +D E H + + + YE A + ++ V + +KL ++E +
Sbjct: 94 EAAMVDVWTEVETHQYNSAISPIVYECIIN-PAMRGIPTNQKVVDESAEKLKKVLEVYEA 152
Query: 527 HIAAGKLTWGDFV-FTSM--FDYLKTMLQIP--DLEVQYPAFKKVLQSVLTQPKVK 679
++ GDFV F + F Y + P L YP K + ++ +P VK
Sbjct: 153 RLSQSTYLAGDFVSFADLNHFPYTFYFMGTPYASLFDSYPHVKAWWERLMARPSVK 208
>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 41.1 bits (92), Expect = 0.001
Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 12/175 (6%)
Frame = +2
Query: 191 DHRVLSADWPDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYGLAGA------NDEE 352
D + + P+ + PFGQMP +S A+ RY+ RKY + A N E
Sbjct: 35 DFKAMEHKSPEHLKRNPFGQMPAFQDGDLLLFESRAVGRYILRKYKTSEANLLREGNLTE 94
Query: 353 AFEIDQNVEF-LHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANKGH 529
A +D +E +H +++ YE A ++ V + L+KL ++E +
Sbjct: 95 AAMVDIGIEVEIHQYYPVISSIVYECLFN-PAMYGVPTNQKVVDNSLEKLKKVLEVYEAR 153
Query: 530 IAAGKLTWGD---FVFTSMFDYLKTMLQIP--DLEVQYPAFKKVLQSVLTQPKVK 679
++ G+ FV S F + + P L +YP K + +P +K
Sbjct: 154 LSQNTYLAGNFLSFVDLSHFPFTFYFMATPYASLLDKYPHVKAWWDGLAARPSIK 208
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 39.9 bits (89), Expect = 0.003
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 21/175 (12%)
Frame = +2
Query: 218 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYGLAG-AN----------------- 343
PD + PFGQ+P +S AICRY+ RK+ AN
Sbjct: 44 PDHLARNPFGQVPAFQDGDLMLFESRAICRYILRKHRATDEANLLREGDPSESAVVDAWL 103
Query: 344 DEEAFEIDQNVEFLHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANK 523
D EA + +V + R A+ E DE + A+ S + L + +EA +
Sbjct: 104 DVEALRYEPSVHAVFVQRRVVPALGGEPDERVIAE-----SVARLRETLAVYEARLEATR 158
Query: 524 GHIAAGKLTWGDFVFTSMFDYLKTMLQIP-DLEV--QYPAFKKVLQSVLTQPKVK 679
G++A G+++ D S F Y + +++P ++ V YP + +LT+P V+
Sbjct: 159 GYLAGGEVSLADL---SHFPYTRYFMEMPYEVPVFGAYPRVTAWWERLLTRPSVR 210
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 39.9 bits (89), Expect = 0.003
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 12/166 (7%)
Frame = +2
Query: 218 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKY-----GLA-GANDEEAFEIDQNVE 379
P+ + PFG++PVL QS AI RY+ RKY GL G + EE+ +D ++
Sbjct: 44 PEHLARNPFGEIPVLEDGDLTLYQSRAIARYIFRKYKPEFLGLGEGGSLEESAMVDVWLD 103
Query: 380 F-LHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANKGHIAAGKLTWG 556
H A + + + + D + V + ++KL ++ + ++ + G
Sbjct: 104 VEAHQHEAAVRPILWHC--IINKFEGRDRDQGVVDESVRKLEKVLGVYEARLSGSRYLAG 161
Query: 557 DFVFTSMFDYLKTMLQIPDLEV-----QYPAFKKVLQSVLTQPKVK 679
D + + + M E YP K +++L +P V+
Sbjct: 162 DRISLADLSHFSNMRYFMATEYAGVVDAYPHVKAWWEALLARPTVQ 207
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 38.3 bits (85), Expect = 0.008
Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 10/164 (6%)
Frame = +2
Query: 218 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYG---LAGANDEEAFEID--QNVEF 382
P + PFGQ+P +S AI +Y+ RK+G L +N E+ +D VE
Sbjct: 44 PPHISRNPFGQVPAFEDGDLTLFESRAISKYILRKHGSDLLRESNLSESAMVDVWLEVES 103
Query: 383 LHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANKGHIAAGKLTWGDF 562
H A + ++ + D V + L+KL +E + ++ K GDF
Sbjct: 104 SHFDGAMSPIIFQCFIVPMFMGGATDI--GVVNESLEKLKKALEVYEAQLSKSKYLAGDF 161
Query: 563 VFTSMFDYLKTMLQI-----PDLEVQYPAFKKVLQSVLTQPKVK 679
+ + + T+ + + YP K + V+ +P VK
Sbjct: 162 ISLADISHFPTVYYLLASAHASVLEAYPRVKAWIDDVMQRPSVK 205
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 37.1 bits (82), Expect = 0.019
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +2
Query: 176 GQDFE----DHRVLSADWPDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYGLAGAN 343
G DF+ D R + P F PFGQ+PVL + +S AI RY+ KY GA+
Sbjct: 30 GLDFDLVPVDLRTAAHKQPHFLALNPFGQIPVLQDGDEVLYESRAINRYIATKYKAEGAD 89
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 36.3 bits (80), Expect = 0.033
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 5/159 (3%)
Frame = +2
Query: 218 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGR---KYGLAGANDEEAFEIDQNVEF-L 385
P+F P G++PVL +S AI RY+ R L G++ + I+Q ++F
Sbjct: 67 PEFLKMNPLGKIPVLETPEGAVFESNAIARYVARLKDNSSLCGSSLIDYSHIEQWMDFSA 126
Query: 386 HDIRAKAAA-VYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANKGHIAAGKLTWGDF 562
++ A +Y E+F+ L LN+ + +N ++ +T D
Sbjct: 127 TEVDANIGRWLYPRLGFGPYVPVLEEFAITSLKRSLGALNTHLASNT-YLVGHSVTLADI 185
Query: 563 VFTSMFDYLKTMLQIPDLEVQYPAFKKVLQSVLTQPKVK 679
V T Y + I ++P ++ +++ QP K
Sbjct: 186 VMTCNLYYGFVRILIKSFTSEFPHVERYFWTMVNQPNFK 224
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 35.9 bits (79), Expect = 0.043
Identities = 37/166 (22%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Frame = +2
Query: 218 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYG------LAGANDEEAFEIDQNVE 379
P+ + PFG++P L +S AI +Y+ RKY L ++ EA +D E
Sbjct: 44 PEHVERNPFGKIPALQDGDLVLFESRAIAKYILRKYKSSKVDLLRESDIREAALVDVWTE 103
Query: 380 F-LHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANKGHIAAGKLTWG 556
H + + +E + ++ V + L+KL ++E + ++ + G
Sbjct: 104 VEAHQYYPALSPIVFEC-IIFPIMRGVPTNQQVVHESLEKLKKVLETYEARLSGSRYLAG 162
Query: 557 DFV-FTSM--FDYLKTMLQIP--DLEVQYPAFKKVLQSVLTQPKVK 679
DF+ F + F + + P L YP K + ++++P +K
Sbjct: 163 DFLSFADLNHFPFTFYFMATPCASLFDAYPHVKAWWEGLMSRPSIK 208
>01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911
Length = 214
Score = 35.1 bits (77), Expect = 0.076
Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 9/168 (5%)
Frame = +2
Query: 218 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYG---LAGANDEEAFEIDQNVEF-L 385
P+ + PFGQ+P L +S AI +Y+ RK L N +A ++D +E
Sbjct: 43 PEHTSRNPFGQVPALQDGDLILFESRAISKYVLRKNNSELLKEHNLSDAAKVDVWLEAES 102
Query: 386 HDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVEANKGHIAAGKLTWGDFV 565
H + V Y+ L V + L+KL + + + + GDF+
Sbjct: 103 HHFDEPMSVVIYQC-LILPVYFGGQTDAKVVEENLEKLKKTFQVYEERLCKFRYLAGDFL 161
Query: 566 FTSMFDYLKT---MLQIPDLEV--QYPAFKKVLQSVLTQPKVKAFLDL 694
+ + T +L P + ++P K + +L +P VK +++
Sbjct: 162 SLADLSHFPTAYYLLATPHAAMLDEFPLVKAWIDGMLARPSVKKVIEM 209
>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
Length = 215
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 218 PDFKPKTPFGQMPVLVIDGKQYA-QSTAICRYLGRK 322
PD + PFGQ+P L DG + +S AIC+Y+ RK
Sbjct: 44 PDHLARNPFGQVPALQ-DGDLFLWESRAICKYVCRK 78
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 218 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYGLAG 337
P F PFGQ+P +S AICRY+ +Y +G
Sbjct: 45 PSFLKLQPFGQVPAFKDSLTTVFESRAICRYICDQYADSG 84
>12_01_0675 +
5759641-5759722,5760247-5760291,5760690-5760775,
5760888-5760959,5761210-5761263,5761385-5761460,
5761778-5761839,5762174-5762233,5762331-5762432
Length = 212
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 155 RMLLAYGGQDFEDHRVLSADWPDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKY 325
R++L G D+E V PD++ P +P LV + S AI YL KY
Sbjct: 21 RIVLNLKGVDYEYKSVNPRTDPDYEKINPIKYIPALVDGDLVVSDSLAIALYLEDKY 77
>06_01_0786 -
5881178-5881303,5881523-5881627,5882078-5882169,
5882267-5882336,5882639-5882724,5882916-5883017,
5883375-5883597,5883693-5883758,5883896-5883986,
5884019-5884057,5885401-5885548,5885623-5885715,
5885782-5885886,5886645-5886826,5886912-5887084
Length = 566
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -2
Query: 241 RSLWLEVRPVSGEHAVVFEVLASVGEQHTAALPESLA 131
R LW+E RP G AV+ + A G PE A
Sbjct: 46 RLLWVETRPEEGGRAVLVKEAAEPGGDAVDVTPEGFA 82
>02_05_1323 + 35700147-35701649
Length = 500
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 69 SARRLTTIN*KCLRLCTITSLARLSGRAA 155
SARR+ +N C +C+ TSL GRAA
Sbjct: 140 SARRVFDVNVSCRDVCSWTSLLTAYGRAA 168
>09_04_0448 + 17692650-17692970,17693461-17693811
Length = 223
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 248 QMPVLVIDGKQYAQSTAICRYL 313
++PVLV DGK A+ST I Y+
Sbjct: 55 KVPVLVHDGKPLAESTVIVEYI 76
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,445,669
Number of Sequences: 37544
Number of extensions: 338686
Number of successful extensions: 1117
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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