Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_N01
(899 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 27 0.23
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 27 0.23
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 1.2
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 23 2.9
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 8.8
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 27.1 bits (57), Expect = 0.23
Identities = 22/77 (28%), Positives = 22/77 (28%), Gaps = 4/77 (5%)
Frame = +1
Query: 658 PXPXPP-PXXPXXAPP---PPPXPPXPXPPPRXPXPXRPPXPXXXXXXPRPXLXPPXPAX 825
P P PP P A P P P PR P P P RP P
Sbjct: 79 PQPRPPHPRLRREAESEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPP 138
Query: 826 XPXPXXXPXLXPXRGRP 876
P P P RP
Sbjct: 139 HPRLRREPEAEPGNNRP 155
Score = 25.4 bits (53), Expect = 0.71
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 3/57 (5%)
Frame = +1
Query: 658 PXPXPPPXXPXXAPPPPPXPPXPX--PPPRXPXPXRPPXPXXXXXXPRPXLXP-PXP 819
P P PP P P P P PR P P P RP P P P
Sbjct: 107 PQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRP 163
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 27.1 bits (57), Expect = 0.23
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Frame = +1
Query: 658 PXPXPPPXXPXXAPPPPPXP-PXPXPPPRXPXPXRPP 765
P P P P AP P P PPP P P PP
Sbjct: 21 PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGP-PGAPP 56
Score = 27.1 bits (57), Expect = 0.23
Identities = 13/36 (36%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Frame = +1
Query: 658 PXPXPPPXXPX-XAPPPPPXPPXPXPPPRXPXPXRP 762
P P P P +PP P P P PP P P
Sbjct: 25 PSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60
Score = 23.0 bits (47), Expect = 3.8
Identities = 11/37 (29%), Positives = 12/37 (32%)
Frame = +1
Query: 655 PPXPXPPPXXPXXAPPPPPXPPXPXPPPRXPXPXRPP 765
P P P P P P P + P P PP
Sbjct: 16 PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPP 52
Score = 23.0 bits (47), Expect = 3.8
Identities = 11/36 (30%), Positives = 12/36 (33%)
Frame = +1
Query: 706 PPXPPXPXPPPRXPXPXRPPXPXXXXXXPRPXLXPP 813
P P P P+ P PP P P PP
Sbjct: 21 PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56
Score = 21.8 bits (44), Expect = 8.8
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = +2
Query: 512 PXRXHXPXXXPPRPPXXPPPXPP 580
P R P PP PP PP
Sbjct: 34 PQRGSPPNPSQGPPPGGPPGAPP 56
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.6 bits (51), Expect = 1.2
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 523 PRXXXPPPPPPXXPXPXAA 579
P PPPPPP P +A
Sbjct: 338 PPKPAPPPPPPSSSGPDSA 356
Score = 23.8 bits (49), Expect = 2.2
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +1
Query: 655 PPXPXPPPXXPXXAPP 702
PP P PPP P + P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 700 PPPPXPPXPXPPPRXP 747
PP P PP P P P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 706 PPXPPXPXPPPRXPXP 753
PP P P PPP P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 22.6 bits (46), Expect = 5.0
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 715 PPXPXPPPRXPXPXRP 762
PP P PPP P P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 22.2 bits (45), Expect = 6.6
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 686 PXXPXPPPPXP 718
P P PPPP P
Sbjct: 338 PPKPAPPPPPP 348
Score = 21.8 bits (44), Expect = 8.8
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +1
Query: 538 PPPPPPXXPXPXAAXP 585
PP P P P P ++ P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 23.4 bits (48), Expect = 2.9
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = -1
Query: 746 GXRGGGXGXGGXGGGGGAXXGXXGG 672
G GG G GGGG G G
Sbjct: 33 GASGGSIVVGANNGGGGGGLGIASG 57
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 2.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 697 PPPPPXPP 720
PPPPP PP
Sbjct: 1355 PPPPPPPP 1362
Score = 21.8 bits (44), Expect = 8.8
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 526 RXXXPPPPPP 555
R PPPPPP
Sbjct: 1351 RQQQPPPPPP 1360
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.8 bits (44), Expect = 8.8
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 693 RPXPPPXXPXPPPAPP 740
R P P PPP PP
Sbjct: 1849 RNIPVSGSPEPPPPPP 1864
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,464
Number of Sequences: 438
Number of extensions: 9372
Number of successful extensions: 41
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -