Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_M22
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical ... 79 5e-15
Z82059-8|CAD89757.1| 207|Caenorhabditis elegans Hypothetical pr... 78 1e-14
Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical pr... 78 1e-14
X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP translo... 78 1e-14
Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical pr... 76 4e-14
U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical pr... 76 4e-14
Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical pr... 74 2e-13
Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical pr... 54 2e-07
Z82059-7|CAD89756.1| 128|Caenorhabditis elegans Hypothetical pr... 53 3e-07
U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical pr... 52 7e-07
Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical pr... 38 0.007
U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical pr... 33 0.27
U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical p... 33 0.36
AC006744-1|AAF60506.2| 328|Caenorhabditis elegans Serpentine re... 32 0.62
Z79755-2|CAB02107.1| 294|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical pr... 31 1.4
AF024501-8|AAN65318.1| 550|Caenorhabditis elegans Hypothetical ... 29 4.4
U32305-11|AAL50323.1| 663|Caenorhabditis elegans Splicing facto... 28 7.7
U32305-10|AAM75378.1| 749|Caenorhabditis elegans Splicing facto... 28 7.7
U32305-9|AAM75380.1| 751|Caenorhabditis elegans Splicing factor... 28 7.7
U06932-1|AAA64937.1| 749|Caenorhabditis elegans CeSWAP protein. 28 7.7
>AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical
protein W02D3.6 protein.
Length = 300
Score = 78.6 bits (185), Expect = 5e-15
Identities = 34/49 (69%), Positives = 38/49 (77%)
Frame = +1
Query: 445 YKGYRRCLRPYPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 591
YKG L PKEQG +FWRGN ANV+RYFPTQALNFAFKD YK++F
Sbjct: 55 YKGIMDVLARVPKEQGYAAFWRGNLANVLRYFPTQALNFAFKDTYKKMF 103
Score = 60.9 bits (141), Expect = 1e-09
Identities = 29/53 (54%), Positives = 32/53 (60%)
Frame = +2
Query: 605 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREXSG 763
DK +FW++F TSLCFVYPLDF RTRL ADVGKG RE G
Sbjct: 108 DKNKEFWKFFAGNLASGGAAGATSLCFVYPLDFVRTRLGADVGKG-VDREFQG 159
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +3
Query: 762 GLGNWISKIFKSDGLIGLYRRFRV 833
GL + KI KSDG IGLYR F V
Sbjct: 159 GLTDCFVKIVKSDGPIGLYRGFFV 182
>Z82059-8|CAD89757.1| 207|Caenorhabditis elegans Hypothetical
protein T27E9.1c protein.
Length = 207
Score = 77.8 bits (183), Expect = 1e-14
Identities = 34/50 (68%), Positives = 38/50 (76%)
Frame = +1
Query: 445 YKGYRRCLRPYPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 594
YKG L PKEQG+ + WRGN ANVIRYFPTQA+NFAFKD YK +FL
Sbjct: 55 YKGIMDVLIRVPKEQGVAALWRGNLANVIRYFPTQAMNFAFKDTYKAIFL 104
Score = 62.1 bits (144), Expect = 5e-10
Identities = 27/44 (61%), Positives = 30/44 (68%)
Frame = +2
Query: 605 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGK 736
DKK FW++F TSLCFVYPLDFARTRLAAD+GK
Sbjct: 108 DKKKDFWKFFAGNLASGGAAGATSLCFVYPLDFARTRLAADIGK 151
>Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical
protein T27E9.1a protein.
Length = 300
Score = 77.8 bits (183), Expect = 1e-14
Identities = 34/50 (68%), Positives = 38/50 (76%)
Frame = +1
Query: 445 YKGYRRCLRPYPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 594
YKG L PKEQG+ + WRGN ANVIRYFPTQA+NFAFKD YK +FL
Sbjct: 55 YKGIMDVLIRVPKEQGVAALWRGNLANVIRYFPTQAMNFAFKDTYKAIFL 104
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/53 (56%), Positives = 34/53 (64%)
Frame = +2
Query: 605 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREXSG 763
DKK FW++F TSLCFVYPLDFARTRLAAD+GK + RE G
Sbjct: 108 DKKKDFWKFFAGNLASGGAAGATSLCFVYPLDFARTRLAADIGKAN-DREFKG 159
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3
Query: 762 GLGNWISKIFKSDGLIGLYRRFRV 833
GL + + KI KSDG IGLYR F V
Sbjct: 159 GLADCLIKIVKSDGPIGLYRGFFV 182
>X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP
translocase protein.
Length = 300
Score = 77.8 bits (183), Expect = 1e-14
Identities = 34/50 (68%), Positives = 38/50 (76%)
Frame = +1
Query: 445 YKGYRRCLRPYPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 594
YKG L PKEQG+ + WRGN ANVIRYFPTQA+NFAFKD YK +FL
Sbjct: 55 YKGIMDVLIRVPKEQGVAALWRGNLANVIRYFPTQAMNFAFKDTYKAIFL 104
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/53 (56%), Positives = 34/53 (64%)
Frame = +2
Query: 605 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREXSG 763
DKK FW++F TSLCFVYPLDFARTRLAAD+GK + RE G
Sbjct: 108 DKKKDFWKFFAGNLASGGAAGATSLCFVYPLDFARTRLAADIGKAN-DREFKG 159
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3
Query: 762 GLGNWISKIFKSDGLIGLYRRFRV 833
GL + + KI KSDG IGLYR F V
Sbjct: 159 GLADCLIKIVKSDGPIGLYRGFFV 182
>Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical
protein K01H12.2 protein.
Length = 313
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/49 (69%), Positives = 36/49 (73%)
Frame = +1
Query: 445 YKGYRRCLRPYPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 591
YKG L PKEQG + WRGN ANVIRYFPTQALNFAFKD YK +F
Sbjct: 68 YKGIVDVLVRVPKEQGYAALWRGNLANVIRYFPTQALNFAFKDTYKNIF 116
Score = 65.7 bits (153), Expect = 4e-11
Identities = 38/105 (36%), Positives = 46/105 (43%)
Frame = +2
Query: 449 RGIVDAFVRIPRSRVSFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKKTQFWR 628
+GIVD VR+P+ + DKK FW+
Sbjct: 69 KGIVDVLVRVPKEQGYAALWRGNLANVIRYFPTQALNFAFKDTYKNIFQKGLDKKKDFWK 128
Query: 629 YFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREXSG 763
+F TSLCFVYPLDFARTRLAADVGK + +RE G
Sbjct: 129 FFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAN-EREFKG 172
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3
Query: 762 GLGNWISKIFKSDGLIGLYRRFRV 833
GL + + KI KSDG IGLYR F V
Sbjct: 172 GLADCLVKIAKSDGPIGLYRGFFV 195
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 445 YKGYRRCLRPYPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 591
+KG CL K G + +RG F +V +A F D K VF
Sbjct: 170 FKGLADCLVKIAKSDGPIGLYRGFFVSVQGIIIYRAAYFGMFDTAKMVF 218
>U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical
protein T01B11.4 protein.
Length = 313
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/49 (69%), Positives = 36/49 (73%)
Frame = +1
Query: 445 YKGYRRCLRPYPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 591
YKG L PKEQG + WRGN ANVIRYFPTQALNFAFKD YK +F
Sbjct: 68 YKGIVDVLVRVPKEQGYAALWRGNLANVIRYFPTQALNFAFKDTYKNIF 116
Score = 65.7 bits (153), Expect = 4e-11
Identities = 38/105 (36%), Positives = 46/105 (43%)
Frame = +2
Query: 449 RGIVDAFVRIPRSRVSFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKKTQFWR 628
+GIVD VR+P+ + DKK FW+
Sbjct: 69 KGIVDVLVRVPKEQGYAALWRGNLANVIRYFPTQALNFAFKDTYKNIFQKGLDKKKDFWK 128
Query: 629 YFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREXSG 763
+F TSLCFVYPLDFARTRLAADVGK + +RE G
Sbjct: 129 FFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAN-EREFKG 172
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3
Query: 762 GLGNWISKIFKSDGLIGLYRRFRV 833
GL + + KI KSDG IGLYR F V
Sbjct: 172 GLADCLVKIAKSDGPIGLYRGFFV 195
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 445 YKGYRRCLRPYPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 591
+KG CL K G + +RG F +V +A F D K VF
Sbjct: 170 FKGLADCLVKIAKSDGPIGLYRGFFVSVQGIIIYRAAYFGMFDTAKMVF 218
>Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical
protein C47E12.2 protein.
Length = 306
Score = 73.7 bits (173), Expect = 2e-13
Identities = 34/61 (55%), Positives = 39/61 (63%)
Frame = +1
Query: 445 YKGYRRCLRPYPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGRC*QEDAVL 624
Y G PKEQG +SFWRGN NVIRYFPTQA NFAF D YK + L +E+ VL
Sbjct: 64 YNGIIDAFVRVPKEQGFVSFWRGNMTNVIRYFPTQAFNFAFNDLYKSILLKNMKRENNVL 123
Query: 625 A 627
+
Sbjct: 124 S 124
Score = 41.5 bits (93), Expect = 8e-04
Identities = 34/131 (25%), Positives = 49/131 (37%)
Frame = +2
Query: 371 PSKRVKAAGSKVQHGQQAESPXXSVTRGIVDAFVRIPRSRVSFHXXXXXXXXXXXXXXXX 550
P +RVK +VQ+ + + P GI+DAFVR+P+ +
Sbjct: 41 PIERVKIL-LQVQYSHK-DIPADKRYNGIIDAFVRVPKEQGFVSFWRGNMTNVIRYFPTQ 98
Query: 551 XXXXXXXXXXXXXXXXXXDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADV 730
++ Y +SLC VYPLDF RTRL+AD+
Sbjct: 99 AFNFAFNDLYKSILLKNMKRENNVLSYSVRTLVSGGLAGCSSLCIVYPLDFIRTRLSADI 158
Query: 731 GKGDGQREXSG 763
+RE G
Sbjct: 159 NH-HTKREYKG 168
>Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical
protein R07E3.4 protein.
Length = 298
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = +1
Query: 445 YKGYRRCLRPYPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 594
Y G R C+ EQG ++ WRGN A V R P LNFAF+D Y+ L
Sbjct: 54 YNGIRDCISKIRLEQGAMALWRGNGAGVARCLPNHTLNFAFRDIYRNTLL 103
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +2
Query: 605 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREXSG 763
D+ F ++ T+L +YP DFARTRLA DV K DG R+ G
Sbjct: 107 DRNESFGKFLAGTFVSGGLGGATTLFMLYPFDFARTRLALDV-KKDGSRKYKG 158
>Z82059-7|CAD89756.1| 128|Caenorhabditis elegans Hypothetical
protein T27E9.1b protein.
Length = 128
Score = 52.8 bits (121), Expect = 3e-07
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = +1
Query: 445 YKGYRRCLRPYPKEQGLLSFWRGNFANVIRYFPTQ 549
YKG L PKEQG+ + WRGN ANVIRYFPTQ
Sbjct: 55 YKGIMDVLIRVPKEQGVAALWRGNLANVIRYFPTQ 89
>U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical
protein F25B4.7 protein.
Length = 306
Score = 51.6 bits (118), Expect = 7e-07
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +1
Query: 445 YKGYRRCLRPYPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 594
YKG C P+EQG LSFWRGN+ N++R ++L +FK+ +++ L
Sbjct: 61 YKGIVDCFIRVPREQGFLSFWRGNWVNILRSCSQESLGLSFKEFFRKYSL 110
Score = 48.8 bits (111), Expect = 5e-06
Identities = 30/105 (28%), Positives = 39/105 (37%)
Frame = +2
Query: 449 RGIVDAFVRIPRSRVSFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKKTQFWR 628
+GIVD F+R+PR + D KTQ R
Sbjct: 62 KGIVDCFIRVPREQGFLSFWRGNWVNILRSCSQESLGLSFKEFFRKYSLEGVDPKTQHSR 121
Query: 629 YFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREXSG 763
+ +L +YPLDF RTRLA D+GK RE +G
Sbjct: 122 WLVGNLVAGGGSGCATLATIYPLDFIRTRLAIDLGKRKSDREFTG 166
>Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical
protein F17E5.2 protein.
Length = 531
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 451 GYRRCLRPYPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 585
G C+ E G+ SFWRGN NVI+ P A+ F D+ K+
Sbjct: 283 GVVSCVHLLHAEGGIKSFWRGNGINVIKIAPESAMKFMCYDQIKR 327
>U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical
protein K02F3.2 protein.
Length = 707
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 445 YKGYRRCLRPYPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 591
Y G C R KE+G +S W+G A V R P A+ + +++F
Sbjct: 600 YNGVIDCARKLIKEEGPMSLWKGTAARVCRSSPQFAVTLLTYEVLQRLF 648
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = +1
Query: 445 YKGYRRCLRPYPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 591
YK C + K +GLL +RG ++ P +A+ D + F
Sbjct: 412 YKNSLDCFKKVVKFEGLLGLYRGLLPQIVGVAPEKAIKLTMNDYMRDKF 460
>U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical
protein B0432.4 protein.
Length = 306
Score = 32.7 bits (71), Expect = 0.36
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 445 YKGYRRCLRPYPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGRC*QEDAV 621
Y G L KE+G+L+ WRG V+R A A + KQ L +D +
Sbjct: 147 YTGVVNALTRITKEEGVLTLWRGCTPTVLRAMVVNAAQLATYSQAKQALLASGKVQDGI 205
>AC006744-1|AAF60506.2| 328|Caenorhabditis elegans Serpentine
receptor, class t protein52 protein.
Length = 328
Score = 31.9 bits (69), Expect = 0.62
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3
Query: 674 RWLRRHHRRPDYQRSNARTASSCQHRPRNT 585
RW+RR + P Q S+ TA+S +HR RNT
Sbjct: 300 RWIRR--KNPAVQDSDKYTANSLEHRSRNT 327
>Z79755-2|CAB02107.1| 294|Caenorhabditis elegans Hypothetical
protein F43G9.3 protein.
Length = 294
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 481 KEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 588
+E G + +RGN A + R P ++ FA ++YK++
Sbjct: 64 RENGFFALYRGNSATMARVVPYASMQFAAFEQYKKL 99
>Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical
protein C54G10.4b protein.
Length = 360
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 445 YKGYRRCLRPYPKEQGLLSFWRGNFANVIRYFPTQALNF 561
YK Y C++ E+G F+ G + +IR FP+ A F
Sbjct: 227 YKSYMHCIKQTYLERGYRGFFVGLNSALIRAFPSNAATF 265
>Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical
protein C54G10.4a protein.
Length = 310
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 445 YKGYRRCLRPYPKEQGLLSFWRGNFANVIRYFPTQALNF 561
YK Y C++ E+G F+ G + +IR FP+ A F
Sbjct: 227 YKSYMHCIKQTYLERGYRGFFVGLNSALIRAFPSNAATF 265
>AF024501-8|AAN65318.1| 550|Caenorhabditis elegans Hypothetical
protein F39E9.12 protein.
Length = 550
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 475 YPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGRC*QEDAVLAL 630
YP FW + A V+ + NF F+ Y+ FL C + DAVL +
Sbjct: 348 YPPLTTYFWFWIKDVAEVVFEYALIPWNFLFQPSYEDEFL-PCEKHDAVLVI 398
>U32305-11|AAL50323.1| 663|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
b protein.
Length = 663
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = -3
Query: 779 DPVSETRRXHAGHLPYRHRRRD-GYVRSRG-GTRSTERWLRRHHRRPDYQRSNARTASSC 606
+PV E +R RHR+R RSR R R ++ + + RS +R++S
Sbjct: 590 EPVEEMKRTDEDRERKRHRKRSRSRRRSRSCSPRDRSREHKKSRKSGRHHRSRSRSSSRD 649
Query: 605 QHR 597
+HR
Sbjct: 650 RHR 652
>U32305-10|AAM75378.1| 749|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
a protein.
Length = 749
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = -3
Query: 779 DPVSETRRXHAGHLPYRHRRRD-GYVRSRG-GTRSTERWLRRHHRRPDYQRSNARTASSC 606
+PV E +R RHR+R RSR R R ++ + + RS +R++S
Sbjct: 676 EPVEEMKRTDEDRERKRHRKRSRSRRRSRSCSPRDRSREHKKSRKSGRHHRSRSRSSSRD 735
Query: 605 QHR 597
+HR
Sbjct: 736 RHR 738
>U32305-9|AAM75380.1| 751|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
d protein.
Length = 751
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = -3
Query: 779 DPVSETRRXHAGHLPYRHRRRD-GYVRSRG-GTRSTERWLRRHHRRPDYQRSNARTASSC 606
+PV E +R RHR+R RSR R R ++ + + RS +R++S
Sbjct: 678 EPVEEMKRTDEDRERKRHRKRSRSRRRSRSCSPRDRSREHKKSRKSGRHHRSRSRSSSRD 737
Query: 605 QHR 597
+HR
Sbjct: 738 RHR 740
>U06932-1|AAA64937.1| 749|Caenorhabditis elegans CeSWAP protein.
Length = 749
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = -3
Query: 779 DPVSETRRXHAGHLPYRHRRRD-GYVRSRG-GTRSTERWLRRHHRRPDYQRSNARTASSC 606
+PV E +R RHR+R RSR R R ++ + + RS +R++S
Sbjct: 676 EPVEEMKRTDEDRERKRHRKRSRSRRRSRSCSPRDRSREHKKSRKSGRHHRSRSRSSSRD 735
Query: 605 QHR 597
+HR
Sbjct: 736 RHR 738
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,434,815
Number of Sequences: 27780
Number of extensions: 437994
Number of successful extensions: 1228
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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