Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_M22
         (880 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    92   7e-21
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    92   7e-21
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    24   2.1  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   3.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   8.6  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 91.9 bits (218), Expect = 7e-21
 Identities = 41/51 (80%), Positives = 42/51 (82%)
 Frame = +1

Query: 445 YKGYRRCLRPYPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLG 597
           YKG   C    PKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLG
Sbjct: 53  YKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLG 103



 Score = 76.2 bits (179), Expect = 4e-16
 Identities = 49/131 (37%), Positives = 59/131 (45%)
 Frame = +2

Query: 371 PSKRVKAAGSKVQHGQQAESPXXSVTRGIVDAFVRIPRSRVSFHXXXXXXXXXXXXXXXX 550
           P +RVK    +VQH  +  S      +G++D FVRIP+ +                    
Sbjct: 30  PIERVKLL-LQVQHISKQISEEQRY-KGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQ 87

Query: 551 XXXXXXXXXXXXXXXXXXDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADV 730
                             DK TQF RYF            TSLCFVYPLDFARTRLAADV
Sbjct: 88  ALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADV 147

Query: 731 GKGDGQREXSG 763
           GK  G+RE +G
Sbjct: 148 GKAGGEREFTG 158



 Score = 38.3 bits (85), Expect = 9e-05
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = +3

Query: 762 GLGNWISKIFKSDGLIGLYRRFRV 833
           GLGN ++KIFK+DG+ GLYR F V
Sbjct: 158 GLGNCLTKIFKADGITGLYRGFGV 181



 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 445 YKGYRRCLRPYPKEQGLLSFWRGNFANVIR 534
           YK    C     K +G  +F++G F+N++R
Sbjct: 253 YKSTLHCWATIYKTEGGNAFFKGAFSNILR 282


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 91.9 bits (218), Expect = 7e-21
 Identities = 41/51 (80%), Positives = 42/51 (82%)
 Frame = +1

Query: 445 YKGYRRCLRPYPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLG 597
           YKG   C    PKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLG
Sbjct: 53  YKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLG 103



 Score = 76.2 bits (179), Expect = 4e-16
 Identities = 49/131 (37%), Positives = 59/131 (45%)
 Frame = +2

Query: 371 PSKRVKAAGSKVQHGQQAESPXXSVTRGIVDAFVRIPRSRVSFHXXXXXXXXXXXXXXXX 550
           P +RVK    +VQH  +  S      +G++D FVRIP+ +                    
Sbjct: 30  PIERVKLL-LQVQHISKQISEEQRY-KGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQ 87

Query: 551 XXXXXXXXXXXXXXXXXXDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADV 730
                             DK TQF RYF            TSLCFVYPLDFARTRLAADV
Sbjct: 88  ALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADV 147

Query: 731 GKGDGQREXSG 763
           GK  G+RE +G
Sbjct: 148 GKAGGEREFTG 158



 Score = 38.3 bits (85), Expect = 9e-05
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = +3

Query: 762 GLGNWISKIFKSDGLIGLYRRFRV 833
           GLGN ++KIFK+DG+ GLYR F V
Sbjct: 158 GLGNCLTKIFKADGITGLYRGFGV 181



 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 445 YKGYRRCLRPYPKEQGLLSFWRGNFANVIR 534
           YK    C     K +G  +F++G F+N++R
Sbjct: 253 YKSTLHCWATIYKTEGGNAFFKGAFSNILR 282


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +3

Query: 126 SGAPGD--YEITPKSPWFKNXELVFRD 200
           SG  GD   E +PK+PW+K  ++  +D
Sbjct: 194 SGWHGDNMLEPSPKTPWYKGWKVERKD 220


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 356 SLETGGGDTRPAQEFLSERDPDR 288
           +++  G +  PA+ +L  RDP+R
Sbjct: 401 TVDPAGCNAGPAKYYLKSRDPER 423


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -3

Query: 668 LRRHHRRPDYQRSNARTASSCQHRP 594
           L+RHH   ++      TA    HRP
Sbjct: 138 LQRHHHLQNHHHHLQSTAVQDHHRP 162


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 254,196
Number of Sequences: 438
Number of extensions: 5772
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)