Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_M20
(995 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.003
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.063
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.25
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.33
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.44
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.58
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 0.77
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 1.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 24 1.8
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 28 2.4
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 27 3.1
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 4.1
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 4.1
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 5.4
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 5.4
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 26 9.5
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.5 bits (83), Expect = 0.003
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = +3
Query: 462 PPPPPPXXXXLSPPPPXXPXFXXXXPPXXXXXPPPPPPKXXXXXXXLFXXXXPPXXPXKK 641
P PPP PPPP P PP PPPPPP + P P K
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPP-----PPPPPPPAVSAGGSRYYAPAPQAEPEPK 804
Score = 36.3 bits (80), Expect = 0.007
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 459 APPPPPPXXXXLSPPPPXXPXFXXXXPPXXXXXPPPPPP 575
+PPPPPP +P P P P PPPPPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPV--PPPAPIMGGPPPPPPP 767
Score = 30.7 bits (66), Expect = 0.33
Identities = 19/69 (27%), Positives = 21/69 (30%), Gaps = 6/69 (8%)
Frame = +1
Query: 805 PPXPXXXXSXPKXXKXXXXXPXPPPPPXXKNXPPPXXXXXXKXXXXXXXXPPXXXPP--- 975
P P + + K P PPPP P P PP PP
Sbjct: 712 PLLPDVSDTVEEQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVA 771
Query: 976 ---PXPPPP 993
P PPPP
Sbjct: 772 GAGPPPPPP 780
Score = 28.3 bits (60), Expect = 1.8
Identities = 14/39 (35%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = +3
Query: 465 PPPPPXXXXLSPPPP--XXPXFXXXXPPXXXXXPPPPPP 575
P P P + PP P P P PPPPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 802 PPPXPXXXXSXPKXXKXXXXXPXPPPPPXXKNXPPP 909
PPP P P PPPPP PPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPP----PPPP 783
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +1
Query: 802 PPPXPXXXXSXPKXXKXXXXXPXPPPPPXXKNXPPP 909
P P P P P PPPP PPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.1 bits (72), Expect = 0.063
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 4/31 (12%)
Frame = +2
Query: 494 LPPPPPXPXFXXXX----PPXXXXXPPPPPP 574
LPPPPP P PP PPPPPP
Sbjct: 336 LPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 31.5 bits (68), Expect = 0.19
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +3
Query: 468 PPPPXXXXLSPPPPXXPXFXXXXPPXXXXXPPPPPPK 578
PPPP PPP PP PPPPPP+
Sbjct: 337 PPPP------PPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Score = 31.1 bits (67), Expect = 0.25
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 450 KXXAPPPPPPXXXXLSPPPPXXPXFXXXXPPXXXXXPPPPP 572
K PPPPPP PP PP PPPPP
Sbjct: 308 KKRPPPPPPPSRRNRGKPPIGNGSSNSSLPP-----PPPPP 343
Score = 28.7 bits (61), Expect = 1.3
Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 5/63 (7%)
Frame = +3
Query: 459 APPP-PPPXXXXLSPPP--PXXPXFXXXXPP--XXXXXPPPPPPKXXXXXXXLFXXXXPP 623
APPP PPP +S PP P P P PP PPP L P
Sbjct: 252 APPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRP 311
Query: 624 XXP 632
P
Sbjct: 312 PPP 314
Score = 28.3 bits (60), Expect = 1.8
Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +3
Query: 459 APPPPP-PXXXXLSPPPPXXPXFXXXXPPXXXXXPPPPPP 575
AP PP P ++PP P PP PP P P
Sbjct: 443 APAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 27.9 bits (59), Expect = 2.4
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +3
Query: 462 PPPPPPXXXXLSPPPPXXPXFXXXXPPXXXXXPPPPPPKXXXXXXXLFXXXXPPXXP 632
PP P P S PP P P PP PP PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Score = 27.1 bits (57), Expect = 4.1
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = +3
Query: 459 APPPPPPXXXXLS--PPPPXXPXFXXXXPPXXXXXPPPPPP 575
APPPPPP + PPP PP PPP P
Sbjct: 360 APPPPPPRSAPSTGRQPPPLSSSRAVSNPP----APPPAIP 396
Score = 25.8 bits (54), Expect = 9.5
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +1
Query: 865 PXPPPPPXXKNXPPPXXXXXXKXXXXXXXXPPXXXPPPXPPP 990
P PPPPP +N P PPP PPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSN---------SSLPPPPPPP 343
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.1 bits (67), Expect = 0.25
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 497 PPPPPXPXFXXXXPPXXXXXPPPP 568
PPPPP P F PP PPPP
Sbjct: 10 PPPPPPPGFE---PPSQPPPPPPP 30
Score = 29.9 bits (64), Expect = 0.58
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 462 PPPPPPXXXXLSPPPPXXP 518
PPPPPP S PPP P
Sbjct: 11 PPPPPPGFEPPSQPPPPPP 29
Score = 28.3 bits (60), Expect = 1.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 538 PPXXXPPPPPPP 573
PP PPPPPPP
Sbjct: 5 PPGNPPPPPPPP 16
Score = 27.9 bits (59), Expect = 2.4
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 491 PLPPPPPXPXFXXXXPPXXXXXPPPPPP 574
P PPPP P PP PPPPPP
Sbjct: 6 PGNPPPPPPP-PGFEPP--SQPPPPPPP 30
Score = 26.6 bits (56), Expect = 5.4
Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 3/24 (12%)
Frame = +3
Query: 462 PPPPPP---XXXXLSPPPPXXPXF 524
PPPPPP PPPP P +
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPGY 32
Score = 25.8 bits (54), Expect = 9.5
Identities = 10/15 (66%), Positives = 10/15 (66%), Gaps = 2/15 (13%)
Frame = +1
Query: 535 PPPXXXPP--PPPPP 573
PPP PP PPPPP
Sbjct: 14 PPPGFEPPSQPPPPP 28
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.7 bits (66), Expect = 0.33
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -2
Query: 571 GGGGGXXXXXGGXXXXKXGXXGGGGERXFXXGGGGGGA 458
G GG GG G G GG R GGG GGA
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGA 43
Score = 29.5 bits (63), Expect = 0.77
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -2
Query: 571 GGGGGXXXXXGGXXXXKXGXXGG-GGERXFXXGGGGGG 461
GG GG GG + G GG GG R GG GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGG 46
Score = 29.5 bits (63), Expect = 0.77
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -2
Query: 574 GGGGGGXXXXXGGXXXXKXGXXGGGGERXFXXGGGGGG 461
GG GGG GG G GG G GG GG
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 28.3 bits (60), Expect = 1.8
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -2
Query: 571 GGGGGXXXXXGGXXXXKXGXXGGGGERXFXXGGGGGGA 458
GG GG GG + G GGG GG GGA
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGA 53
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -2
Query: 574 GGGGGGXXXXXGGXXXXKXGXXGGGGERXFXXGGGGGGA 458
GGG GG GG + G G G R GG GGA
Sbjct: 37 GGGRGGARGGRGGRGGARGGRGGSSGGR----GGAKGGA 71
Score = 27.9 bits (59), Expect = 2.4
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -2
Query: 574 GGGGGGXXXXXGGXXXXKXGXXGGGGERXFXXGGGGG 464
GG GG GG + G G G R GG GG
Sbjct: 30 GGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 27.5 bits (58), Expect = 3.1
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -2
Query: 574 GGGGGGXXXXXGGXXXXKXGXXGGGGERXFXXG--GGGGGA 458
GGG GG GG + G G GG R G GG GGA
Sbjct: 29 GGGRGG--ARGGGRGGARGGRGGRGGARGGRGGSSGGRGGA 67
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -3
Query: 579 FXGGGGGGXXXXXGGXXXXXXGXGGG-GGRG 490
F GG GG GG G GG GGRG
Sbjct: 28 FGGGRGGARGGGRGGARGGRGGRGGARGGRG 58
Score = 26.6 bits (56), Expect = 5.4
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = -3
Query: 573 GGGGGGXXXXXGGXXXXXXGXGG--GGGRG 490
GG GG GG G GG GGGRG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRG 41
Score = 26.2 bits (55), Expect = 7.2
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -2
Query: 571 GGGGGXXXXXGG-XXXXKXGXXGGGGERXFXXGGGGGGA 458
GG GG GG + G GG G R GG GG +
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSS 61
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.3 bits (65), Expect = 0.44
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +3
Query: 465 PPPPPXXXXLSPPPPXXPXFXXXXPPXXXXXPPPPPP 575
PPPPP PPPP P P PPPP P
Sbjct: 1707 PPPPPMSV---PPPPSAPPM----PAGPPSAPPPPLP 1736
Score = 27.1 bits (57), Expect = 4.1
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 471 PPPXXXXLSPPPPXXPXFXXXXPPXXXXXPPPPPP 575
PP PPPP PP P PPP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 26.6 bits (56), Expect = 5.4
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 865 PXPPPPPXXKNXPPPXXXXXXKXXXXXXXXPPXXXPPPXP 984
P PPPPP + PPP PP PPP P
Sbjct: 1705 PTPPPPPM--SVPPPPSAPPMPAG------PPSAPPPPLP 1736
Score = 26.6 bits (56), Expect = 5.4
Identities = 11/35 (31%), Positives = 12/35 (34%)
Frame = +1
Query: 802 PPPXPXXXXSXPKXXKXXXXXPXPPPPPXXKNXPP 906
PPP P P P PPPP + P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.9 bits (64), Expect = 0.58
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -2
Query: 574 GGGGGGXXXXXGGXXXXKXGXXGGGGERXFXXGGGGGGAXXF 449
GGG GG GG G GG G GG GGG F
Sbjct: 194 GGGSGGPPPGPGGFGGF--GGFGGEGHHHGGHGGFGGGPGGF 233
Score = 29.9 bits (64), Expect = 0.58
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -2
Query: 631 GXXGGXXXXKXKXXXXXXXGGGGGGXXXXXGGXXXXKXGXXGGGGERXFXXGGGGGG 461
G GG GGG GG GG G GG G GG GGG
Sbjct: 208 GGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 27.9 bits (59), Expect = 2.4
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = -3
Query: 573 GGGGGGXXXXXGGXXXXXXGXGGG-GGRG 490
GGG GG GG G GGG GG G
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 26.6 bits (56), Expect = 5.4
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -1
Query: 572 GGGGGGGXXXGGGVXXKXXGXGGGGG 495
GG GGG GGG G GG GG
Sbjct: 245 GGFGGGLGGFGGGPGGFGGGPGGHGG 270
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.5 bits (63), Expect = 0.77
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -2
Query: 574 GGGGGGXXXXXGGXXXXKXGXXGGGGERXFXXGGGGGGAXXF 449
GG GG GG G GGG F G GG F
Sbjct: 141 GGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGF 182
Score = 26.6 bits (56), Expect = 5.4
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -2
Query: 574 GGGGGGXXXXXGGXXXXKXGXXGGGGERXFXXGGGGGG 461
GG GG GG G GG R GG GG
Sbjct: 152 GGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.1 bits (62), Expect = 1.0
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 462 PPPPPPXXXXLSPPPPXXPXFXXXXPPXXXXXPPPP 569
PPP P SPP P PP PPPP
Sbjct: 172 PPPAQPAAPVKSPPSA--PSLPSAVPPMPPKVPPPP 205
Score = 27.9 bits (59), Expect = 2.4
Identities = 13/39 (33%), Positives = 14/39 (35%), Gaps = 1/39 (2%)
Frame = +3
Query: 462 PPPPPPXXXXLSPPPPXX-PXFXXXXPPXXXXXPPPPPP 575
PP P + PP P P PP PPP P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 27.9 bits (59), Expect = 2.4
Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 6/46 (13%)
Frame = +3
Query: 459 APPPP---PPXXXXLSPPPPXXPXFXXXXPPXXXXXP---PPPPPK 578
APP P PP L PPP P PP P PP PPK
Sbjct: 157 APPIPSKAPPIPSSL--PPPAQPAAPVKSPPSAPSLPSAVPPMPPK 200
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 24.2 bits (50), Expect(2) = 1.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 420 PPXXGEKYY*KXXAPPPPPP 479
PP K APPPPPP
Sbjct: 224 PPTYTPKQADPLPAPPPPPP 243
Score = 22.2 bits (45), Expect(2) = 1.8
Identities = 12/38 (31%), Positives = 12/38 (31%)
Frame = +3
Query: 462 PPPPPPXXXXLSPPPPXXPXFXXXXPPXXXXXPPPPPP 575
PPPPPP S P PPPP
Sbjct: 239 PPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPP 276
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 27.9 bits (59), Expect = 2.4
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +1
Query: 871 PPPPPXXKNXPPPXXXXXXKXXXXXXXXPPXXXPPP 978
PPPPP +N PP PP P P
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYP 241
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 578 FXGGGGGGGXXXGGGVXXKXXGXGGG 501
F GGG GG GG + G GGG
Sbjct: 441 FPGGGFPGGGFPGGSYNSQGFGMGGG 466
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.1 bits (57), Expect = 4.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 459 APPPPPPXXXXLSPPPPXXP 518
APPPPPP + PP P
Sbjct: 1881 APPPPPPMALPKAGPPSAAP 1900
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.1 bits (57), Expect = 4.1
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +3
Query: 468 PPPPXXXXLSPPPPXXPXFXXXXPPXXXXXPPPPPP 575
PP P +PP P P PP PPP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 25.8 bits (54), Expect = 9.5
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 805 PPXPXXXXSXPKXXKXXXXXPXPPPPPXXKNXPPPXXXXXXKXXXXXXXXPPXXXPPPXP 984
PP P P K P PPP PP K PP PP P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPP---SEAPP-----VPKPSVGVPPVPPPSTAPPVP 1220
Query: 985 PP 990
P
Sbjct: 1221 TP 1222
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.6 bits (56), Expect = 5.4
Identities = 13/39 (33%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +3
Query: 465 PPPPPXXXXLSPPPPXXP-XFXXXXPPXXXXXPPPPPPK 578
PPPPP +SP P P P P PP+
Sbjct: 744 PPPPPVRSSISPSMPPAPLTHANSSTPMNYVSQPESPPQ 782
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.6 bits (56), Expect = 5.4
Identities = 15/49 (30%), Positives = 15/49 (30%), Gaps = 6/49 (12%)
Frame = +1
Query: 865 PXPPPPPXX------KNXPPPXXXXXXKXXXXXXXXPPXXXPPPXPPPP 993
P PPPPP P P PPP PPPP
Sbjct: 905 PTPPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPPPP 953
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 25.8 bits (54), Expect = 9.5
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +1
Query: 514 PXXXXXTPPPXXXPPPPPPP 573
P + P PPPPPPP
Sbjct: 1083 PVANNVSKPSAVPPPPPPPP 1102
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.147 0.506
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,252,272
Number of Sequences: 5004
Number of extensions: 38338
Number of successful extensions: 562
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 258
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 515273988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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