Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_M17
(1133 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 50 8e-07
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 44 4e-05
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 43 7e-05
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 40 5e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 39 0.001
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 36 0.008
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.056
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 32 0.17
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 32 0.17
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 32 0.17
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 31 0.22
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.30
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 31 0.30
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 30 0.52
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 30 0.68
SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces p... 29 1.2
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 2.8
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 49.6 bits (113), Expect = 8e-07
Identities = 25/54 (46%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +3
Query: 345 PPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXT---PPPXPPPXP 497
PPPPP P P P PP A G PP PP P G PPP PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPP--APIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 32.7 bits (71), Expect = 0.097
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +3
Query: 336 GAXPPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPP 476
G PPPPP G PPP PP A G P P P
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPPAVSAG--GSRYYAPAPQAEPEP 803
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 44.0 bits (99), Expect = 4e-05
Identities = 26/87 (29%), Positives = 29/87 (33%), Gaps = 7/87 (8%)
Frame = +3
Query: 345 PPPPPXKHX------PPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPPXPPP-XPXX 503
PPPPP + PP G PPP PP + PP + PP PPP P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGR 398
Query: 504 XXXXXXXXXXXXXXXPPXXPPPPXXXP 584
P P PP P
Sbjct: 399 SAPALPPLGNASRTSTPPVPTPPSLPP 425
Score = 42.7 bits (96), Expect = 9e-05
Identities = 28/83 (33%), Positives = 29/83 (34%), Gaps = 9/83 (10%)
Frame = +3
Query: 345 PPPPPXKHX---PPXGXXX------PPPXPPTXXAAXXGXPPXPPXPXGXTPPPXPPPXP 497
PPPPP + PP G PPP PP AA G P PP PPP P P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAA--GSIPLPPQGRSAPPPPPPRSAP 370
Query: 498 XXXXXXXXXXXXXXXXXPPXXPP 566
PP PP
Sbjct: 371 STGRQPPPLSSSRAVSNPPAPPP 393
Score = 37.5 bits (83), Expect = 0.003
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 6/57 (10%)
Frame = +3
Query: 345 PPPPPXKHXP--PXGXXXPPPXPPTXXAA---XXGXPPXPP-XPXGXTPPPXPPPXP 497
PP P P P G PP PP+ A G P PP P PPP P P P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 33.9 bits (74), Expect = 0.042
Identities = 20/63 (31%), Positives = 21/63 (33%)
Frame = +3
Query: 396 PPXPPTXXAAXXGXPPXPPXPXGXTPPPXPPPXPXXXXXXXXXXXXXXXXXPPXXPPPPX 575
PP PP G PP + PP PPP P PP PPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPP-PPPPPRSNAAGSIPLPPQGRSAPP--PPPPR 367
Query: 576 XXP 584
P
Sbjct: 368 SAP 370
Score = 33.1 bits (72), Expect = 0.073
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +3
Query: 336 GAXPPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPPXPP 488
G PPPP P PPP + A P PP G + P PP
Sbjct: 357 GRSAPPPPPPRSAPSTGRQPPPL--SSSRAVSNPPAPPPAIPGRSAPALPP 405
Score = 32.7 bits (71), Expect = 0.097
Identities = 20/81 (24%), Positives = 21/81 (25%), Gaps = 6/81 (7%)
Frame = +3
Query: 345 PPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTP------PPXPPPXPXXX 506
P P + P PPP PP P PP P PP P
Sbjct: 237 PSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPS 296
Query: 507 XXXXXXXXXXXXXXPPXXPPP 569
PP PPP
Sbjct: 297 SRVSAAALAANKKRPPPPPPP 317
Score = 31.5 bits (68), Expect = 0.22
Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 8/59 (13%)
Frame = +3
Query: 345 PPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPP-------XPPXPXG-XTPPPXPPPXP 497
P P P P PP PP+ PP PP P G PP PP P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Score = 31.1 bits (67), Expect = 0.30
Identities = 21/75 (28%), Positives = 22/75 (29%)
Frame = +3
Query: 348 PPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPPXPPPXPXXXXXXXXXX 527
PP P P P PP A+ PP P P PP PP P
Sbjct: 388 PPAPPPAIP---GRSAPALPPLGNASRTSTPPVPTPP--SLPPSAPPSLPPSAPPSLPMG 442
Query: 528 XXXXXXXPPXXPPPP 572
PP P P
Sbjct: 443 APAAPPLPPSAPIAP 457
Score = 29.5 bits (63), Expect = 0.90
Identities = 30/97 (30%), Positives = 33/97 (34%), Gaps = 13/97 (13%)
Frame = +3
Query: 339 AXPPPPPXKHXP---PXGXXX-----PPPXPPTXX-AAXXGXPP--XPPXPXG-XTPPPX 482
A PP P + P P G P P PP+ +A PP P P G PP
Sbjct: 390 APPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPL 449
Query: 483 PPPXPXXXXXXXXXXXXXXXXXPPXXP-PPPXXXPRP 590
PP P PP P PPP P P
Sbjct: 450 PPSAP--IAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 29.1 bits (62), Expect = 1.2
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Frame = +3
Query: 327 GXXGAXPPPPPXKHXPPXGXXXP--PPXPPTXXAAXXGXPPXPPXP 458
G A P PP PP P PP PP A P P P
Sbjct: 442 GAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 28.3 bits (60), Expect = 2.1
Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Frame = +3
Query: 354 PPXKHXPPXGXXXPPPXPP--TXXAAXXGXPPXPPXPXGX-TPPPXPPPXP 497
P PP P PP + PP PP G + PP PP P
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP 274
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 43.2 bits (97), Expect = 7e-05
Identities = 22/76 (28%), Positives = 24/76 (31%)
Frame = +3
Query: 345 PPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPPXPPPXPXXXXXXXXX 524
PP P + PP P PP A+ P P PPP P P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPS 189
Query: 525 XXXXXXXXPPXXPPPP 572
PP PPPP
Sbjct: 190 LPSAVPPMPPKVPPPP 205
Score = 33.9 bits (74), Expect = 0.042
Identities = 21/54 (38%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Frame = +3
Query: 339 AXPPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTP-PPXPPPXP 497
A PP P K PP PPP P A P P P P PP PP P
Sbjct: 155 ASAPPIPSK-APPIPSSLPPPAQPA--APVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.5 bits (58), Expect = 3.6
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 4/46 (8%)
Frame = +3
Query: 348 PPPPXKHXPPXGXXXP---PPXPPTXXAAXXGXPPX-PPXPXGXTP 473
PP P PP P PP P+ +A PP PP P P
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 40.3 bits (90), Expect = 5e-04
Identities = 30/81 (37%), Positives = 30/81 (37%)
Frame = -2
Query: 586 RGXXXGGGGXXGGXXXXXXXXXXXXGXXXXGXGGGXGGGVXPXGXGGXGGXPXXAAXXVG 407
RG GG G GG G G GG G G G GG GG P G
Sbjct: 183 RGHNGGGFGGFGGGSGGPPPGPGGFG----GFGGFGGEGHHHGGHGGFGGGPGGFEGGPG 238
Query: 406 GXGGGXXXPXGGXCLXGGGGG 344
G GGG GG GGG G
Sbjct: 239 GFGGGPGGFGGGLGGFGGGPG 259
Score = 39.9 bits (89), Expect = 6e-04
Identities = 27/81 (33%), Positives = 28/81 (34%), Gaps = 2/81 (2%)
Frame = -2
Query: 583 GXXXGGGGXXGGXXXXXXXXXXXXGXXXXGXGGGXGGGVX--PXGXGGXGGXPXXAAXXV 410
G G GG G G GG GGG G GG GG P +
Sbjct: 192 GFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGL 251
Query: 409 GGXGGGXXXPXGGXCLXGGGG 347
GG GGG GG GG G
Sbjct: 252 GGFGGGPGGFGGGPGGHGGPG 272
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +3
Query: 345 PPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPPXP 485
PP P PP PP PP PP P P PPP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 33.1 bits (72), Expect = 0.073
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 393 PPPXPPTXXAAXXGXPPXPPXPXGXTPPPXPPPXP 497
PP P + P PP P PPP PP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 30.3 bits (65), Expect = 0.52
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +3
Query: 339 AXPPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPP-PXP 485
A PPPP PP PP P A PP PP P P P P
Sbjct: 1704 APTPPPPPMSVPP------PPSAPPMPAGPPSAPP-PPLPASSAPSVPNP 1746
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +3
Query: 348 PPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPPXPP 488
PP PP PP PP+ G P PP P + P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPP-PPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 36.3 bits (80), Expect = 0.008
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 432 GXPPXPPXPXGXTPPPXPPPXP 497
G PP PP P G PP PPP P
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPP 28
Score = 29.1 bits (62), Expect = 1.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 336 GAXPPPPPXKHXPPXGXXXPPPXP 407
G PPPPP P PPP P
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 29.1 bits (62), Expect = 1.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 385 GPXPPPXPPPXXRXXXXXPPPLP 453
G PPP PPP PPP P
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.9 bits (59), Expect = 2.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 375 PXGXXXPPPXPPTXXAAXXGXPPXPP 452
P G PPP PP PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 3.6
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 393 PPPXPPTXXAAXXGXPPXPPXP 458
PPP PP PP PP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 6.4
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 428 GRXPPXPSXSXXGXPXPXPPPPP 496
G PP P P PPPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPP 29
Score = 24.6 bits (51), Expect(2) = 2.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 456 PXGXTPPPXPPP 491
P G PPP PPP
Sbjct: 5 PPGNPPPPPPPP 16
Score = 21.8 bits (44), Expect(2) = 2.0
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 549 PPXXPPPPXXXP 584
PP PPPP P
Sbjct: 9 PPPPPPPPGFEP 20
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.5 bits (73), Expect = 0.056
Identities = 22/59 (37%), Positives = 23/59 (38%), Gaps = 5/59 (8%)
Frame = +3
Query: 336 GAXPPPPPXKHXP-PXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPPXP----PPXP 497
G P PPP + P P PP PP A PP P G P P P PP P
Sbjct: 1187 GVPPVPPPSEAPPVPKPSVGVPPVPPPSTA-----PPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 32.3 bits (70), Expect = 0.13
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +3
Query: 336 GAXPPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPPXPPP 491
G P P P PP PP P G PP PP T PP P P
Sbjct: 1177 GIPPVPKPAAGVPP---VPPPSEAPPVPKPSVGVPPVPPP---STAPPVPTP 1222
Score = 31.1 bits (67), Expect = 0.30
Identities = 28/90 (31%), Positives = 28/90 (31%), Gaps = 5/90 (5%)
Frame = +3
Query: 336 GAXPPPPPXKHXPPXG-XXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPPXP----PPXPX 500
GA P P P PP PP P AA P P P G P P P PP P
Sbjct: 1119 GAPPVPKPSVAAPPVPVPSGAPPVPKPSVAA-----PPVPAPSGAPPVPKPSVAAPPVPA 1173
Query: 501 XXXXXXXXXXXXXXXXPPXXPPPPXXXPRP 590
P PPP P P
Sbjct: 1174 PSSGIPPVPKPAAGV--PPVPPPSEAPPVP 1201
Score = 29.5 bits (63), Expect = 0.90
Identities = 25/96 (26%), Positives = 27/96 (28%), Gaps = 12/96 (12%)
Frame = +3
Query: 339 AXPPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXP---------PXPXGXTPPPXP-- 485
A P P P P PP P + A PP P P P G P P P
Sbjct: 1031 APPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSG 1090
Query: 486 -PPXPXXXXXXXXXXXXXXXXXPPXXPPPPXXXPRP 590
PP P P P P+P
Sbjct: 1091 IPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 29.1 bits (62), Expect = 1.2
Identities = 24/89 (26%), Positives = 24/89 (26%), Gaps = 6/89 (6%)
Frame = +3
Query: 336 GAXPPPPPXKHXP-PXGXXXPPPXPPTXXA-----AXXGXPPXPPXPXGXTPPPXPPPXP 497
GA P P P P P PP P A A G PP P P P P P
Sbjct: 1081 GAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP 1140
Query: 498 XXXXXXXXXXXXXXXXXPPXXPPPPXXXP 584
P P P P
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAP 1169
Score = 28.3 bits (60), Expect = 2.1
Identities = 19/64 (29%), Positives = 21/64 (32%), Gaps = 4/64 (6%)
Frame = +3
Query: 318 KTXGXXGAXPPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPPXP---- 485
K+ + PPP P P PP A G PP P P P P
Sbjct: 1054 KSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPV--PAPSGIPPVPKPSVAAPPVPKPSVAV 1111
Query: 486 PPXP 497
PP P
Sbjct: 1112 PPVP 1115
Score = 27.5 bits (58), Expect = 3.6
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = +3
Query: 336 GAXPPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPX---PXGXTPPPXPPPXP 497
GA P P P PP P P G PP PP P P PP P
Sbjct: 1157 GAPPVPKPSVAAPPV--PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVP 1211
Score = 26.6 bits (56), Expect = 6.4
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +3
Query: 339 AXPPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPPXPPPXP 497
A P P P PP P PP PP P G P P P P
Sbjct: 1021 APPVPLPSADAPPI--PVPSTAPPVPIPT--STPPVPKSSSGAPSAPPPVPAP 1069
Score = 26.6 bits (56), Expect = 6.4
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 5/58 (8%)
Frame = +3
Query: 339 AXPPPPPXKHXPPXGXXXP--PPXPPTXXAAXXGXPPXPPXPXGX--TPPP-XPPPXP 497
A P P P PP PP PP A PP P G PPP PP P
Sbjct: 1168 APPVPAPSSGIPPVPKPAAGVPPVPPPSEA-----PPVPKPSVGVPPVPPPSTAPPVP 1220
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 31.9 bits (69), Expect = 0.17
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +3
Query: 345 PPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPPXP 485
PPPPP ++ PP PP A P PP P P
Sbjct: 207 PPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPPVQAYPQAPQQP 253
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 31.9 bits (69), Expect = 0.17
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +3
Query: 336 GAXPPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPP 479
G PPPP H P G PPP PP P PPP
Sbjct: 204 GEHMPPPPMHHKP--GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 249
Score = 31.9 bits (69), Expect = 0.17
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +3
Query: 336 GAXPPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPP 479
G PPPP H P G PPP PP P PPP
Sbjct: 217 GEHMPPPPMHHEP--GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 262
Score = 31.9 bits (69), Expect = 0.17
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +3
Query: 336 GAXPPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPP 479
G PPPP H P G PPP PP P PPP
Sbjct: 230 GEHMPPPPMHHEP--GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 275
Score = 31.9 bits (69), Expect = 0.17
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +3
Query: 336 GAXPPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPP 479
G PPPP H P G PPP PP P PPP
Sbjct: 243 GEHMPPPPMHHEP--GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 288
Score = 31.9 bits (69), Expect = 0.17
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +3
Query: 336 GAXPPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPP 479
G PPPP H P G PPP PP P PPP
Sbjct: 256 GEHMPPPPMHHEP--GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 301
Score = 31.9 bits (69), Expect = 0.17
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +3
Query: 336 GAXPPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPP 479
G PPPP H P G PPP PP P PPP
Sbjct: 269 GEHMPPPPMHHEP--GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 314
Score = 31.9 bits (69), Expect = 0.17
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +3
Query: 336 GAXPPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPP 479
G PPPP H P G PPP PP P PPP
Sbjct: 282 GEHMPPPPMHHEP--GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 327
Score = 31.9 bits (69), Expect = 0.17
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +3
Query: 336 GAXPPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPP 479
G PPPP H P G PPP PP P PPP
Sbjct: 295 GEHMPPPPMHHEP--GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 340
Score = 27.1 bits (57), Expect = 4.8
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +3
Query: 336 GAXPPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXP 449
G PPPP H P G PP PP PP P
Sbjct: 308 GEHMPPPPMHHEP--GEHMPP--PPMHHEPGEHMPPPP 341
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 31.9 bits (69), Expect = 0.17
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +3
Query: 336 GAXPPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPPXPPPXP 497
G P PP PP P P P PP P P PP P P P
Sbjct: 488 GTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVP-PGMALPPGMPAPFP 540
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 31.5 bits (68), Expect = 0.22
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -2
Query: 463 PXGXGGXGGXPXXAAXXVGGXGGGXXXPXGGXCLXGGGGG 344
P G GG GG GG GG GG G GGG
Sbjct: 134 PAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGG 173
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 31.1 bits (67), Expect = 0.30
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Frame = +3
Query: 345 PPPPPXKHXPPXGXXXPP-PXPPTXXAAXXGXPPXPPXPXGXTPPPXPP 488
PPPPP PP P P PP P + PP PP
Sbjct: 238 PPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
Score = 29.5 bits (63), Expect = 0.90
Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 1/52 (1%)
Frame = +3
Query: 345 PPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPP-XPPXPXGXTPPPXPPPXP 497
PPPPP P + A PP P P P PPP P
Sbjct: 193 PPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPP 244
Score = 28.3 bits (60), Expect = 2.1
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Frame = +3
Query: 375 PXGXXXPPPX--PPTXXAAXXGXPPXPPXPXGXTPPPXPPPXP 497
P PPP PP+ A P P PPP PPP P
Sbjct: 161 PNSMVSPPPSFQPPSAAA------PATSLPSDYNPPPPPPPPP 197
Score = 27.9 bits (59), Expect = 2.8
Identities = 18/70 (25%), Positives = 18/70 (25%)
Frame = +3
Query: 381 GXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPPXPPPXPXXXXXXXXXXXXXXXXXPPXX 560
G P PPT P PP P T PP P
Sbjct: 216 GRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPP 275
Query: 561 PPPPXXXPRP 590
P P PRP
Sbjct: 276 PATPSQPPRP 285
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 31.1 bits (67), Expect = 0.30
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +3
Query: 339 AXPPPPPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPPXPPP 491
A PPPPP P G PP PT G P G P P P
Sbjct: 1880 AAPPPPPPMALPKAG---PPSAAPTSALPPAGPPAGATAISGNPGMPAPVP 1927
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 30.3 bits (65), Expect = 0.52
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +3
Query: 375 PXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPPXPPPXP 497
P P P P G PP P P P P PP P
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLP 142
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 29.9 bits (64), Expect = 0.68
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +3
Query: 375 PXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPPXPPPXP 497
P PPP P AA P P P PPP P
Sbjct: 361 PQAAFPPPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAP 401
>SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 473
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +3
Query: 354 PPXKHXPPXGXXXPPPXPPTXXAAXXGXPPXPPXPXGXTPPPXPPP 491
P + PP PPP P A PP G P P P
Sbjct: 343 PKIQRLPPSSIQIPPPKPMQKFPANAASSESPPNATGNFLPSGPVP 388
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.9 bits (59), Expect = 2.8
Identities = 20/53 (37%), Positives = 20/53 (37%)
Frame = -2
Query: 496 GXGGGXGGGVXPXGXGGXGGXPXXAAXXVGGXGGGXXXPXGGXCLXGGGGGXA 338
G GG GGG GG GG A GG GG G GG G A
Sbjct: 23 GGRGGFGGGRGGARGGGRGG----ARGGRGGRGGARGGRGGSSGGRGGAKGGA 71
Score = 26.6 bits (56), Expect = 6.4
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = -2
Query: 496 GXGGGXGG-GVXPXGXGGXGGXPXXAAXXVGGXGGGXXXPXGGXCLXGGGGG 344
G GG GG G G GG GG G GGG GG GG G
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRG------GARGGGRGGARGGRGGRGGARG 55
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.152 0.556
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,542,438
Number of Sequences: 5004
Number of extensions: 28691
Number of successful extensions: 434
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 603631146
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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