Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_M16
         (880 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC095424-1|AAH95424.1|  132|Homo sapiens ribosomal protein S12 p...    42   0.003
BC071930-1|AAH71930.1|  132|Homo sapiens ribosomal protein S12 p...    42   0.003
BC017321-1|AAH17321.1|  132|Homo sapiens ribosomal protein S12 p...    42   0.003
AL137783-3|CAC12946.1|  132|Homo sapiens ribosomal protein S12 p...    42   0.003
AB061840-1|BAB79478.1|  132|Homo sapiens ribosomal protein S12 p...    42   0.003
X53505-1|CAA37582.1|  132|Homo sapiens ribosomal protein S12 pro...    36   0.26 

>BC095424-1|AAH95424.1|  132|Homo sapiens ribosomal protein S12
           protein.
          Length = 132

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 28/86 (32%), Positives = 29/86 (33%)
 Frame = -1

Query: 553 GXXMDVXXXLXXVXXTAXIXGGFVPGFXEXXXXFXXXXXVXXXLXXXXXETXXXKXXXXX 374
           G  MDV   L  V  TA I  G   G  E              L     E    K     
Sbjct: 9   GGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEAL 68

Query: 373 CXXXQIXLVKVDXXXKLGXWXGFXXI 296
           C   QI L+KVD   KLG W G   I
Sbjct: 69  CAEHQINLIKVDDNKKLGEWVGLCKI 94


>BC071930-1|AAH71930.1|  132|Homo sapiens ribosomal protein S12
           protein.
          Length = 132

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 28/86 (32%), Positives = 29/86 (33%)
 Frame = -1

Query: 553 GXXMDVXXXLXXVXXTAXIXGGFVPGFXEXXXXFXXXXXVXXXLXXXXXETXXXKXXXXX 374
           G  MDV   L  V  TA I  G   G  E              L     E    K     
Sbjct: 9   GGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEAL 68

Query: 373 CXXXQIXLVKVDXXXKLGXWXGFXXI 296
           C   QI L+KVD   KLG W G   I
Sbjct: 69  CAEHQINLIKVDDNKKLGEWVGLCKI 94


>BC017321-1|AAH17321.1|  132|Homo sapiens ribosomal protein S12
           protein.
          Length = 132

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 28/86 (32%), Positives = 29/86 (33%)
 Frame = -1

Query: 553 GXXMDVXXXLXXVXXTAXIXGGFVPGFXEXXXXFXXXXXVXXXLXXXXXETXXXKXXXXX 374
           G  MDV   L  V  TA I  G   G  E              L     E    K     
Sbjct: 9   GGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEAL 68

Query: 373 CXXXQIXLVKVDXXXKLGXWXGFXXI 296
           C   QI L+KVD   KLG W G   I
Sbjct: 69  CAEHQINLIKVDDNKKLGEWVGLCKI 94


>AL137783-3|CAC12946.1|  132|Homo sapiens ribosomal protein S12
           protein.
          Length = 132

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 28/86 (32%), Positives = 29/86 (33%)
 Frame = -1

Query: 553 GXXMDVXXXLXXVXXTAXIXGGFVPGFXEXXXXFXXXXXVXXXLXXXXXETXXXKXXXXX 374
           G  MDV   L  V  TA I  G   G  E              L     E    K     
Sbjct: 9   GGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEAL 68

Query: 373 CXXXQIXLVKVDXXXKLGXWXGFXXI 296
           C   QI L+KVD   KLG W G   I
Sbjct: 69  CAEHQINLIKVDDNKKLGEWVGLCKI 94


>AB061840-1|BAB79478.1|  132|Homo sapiens ribosomal protein S12
           protein.
          Length = 132

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 28/86 (32%), Positives = 29/86 (33%)
 Frame = -1

Query: 553 GXXMDVXXXLXXVXXTAXIXGGFVPGFXEXXXXFXXXXXVXXXLXXXXXETXXXKXXXXX 374
           G  MDV   L  V  TA I  G   G  E              L     E    K     
Sbjct: 9   GGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEAL 68

Query: 373 CXXXQIXLVKVDXXXKLGXWXGFXXI 296
           C   QI L+KVD   KLG W G   I
Sbjct: 69  CAEHQINLIKVDDNKKLGEWVGLCKI 94


>X53505-1|CAA37582.1|  132|Homo sapiens ribosomal protein S12
           protein.
          Length = 132

 Score = 35.5 bits (78), Expect = 0.26
 Identities = 26/86 (30%), Positives = 27/86 (31%)
 Frame = -1

Query: 553 GXXMDVXXXLXXVXXTAXIXGGFVPGFXEXXXXFXXXXXVXXXLXXXXXETXXXKXXXXX 374
           G  MDV   L  V  TA I  G   G  E                    E    K     
Sbjct: 9   GGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVQASNCDEPMYVKLVEAL 68

Query: 373 CXXXQIXLVKVDXXXKLGXWXGFXXI 296
               QI L+KVD   KLG W G   I
Sbjct: 69  LAEHQINLIKVDDNKKLGEWVGLCKI 94


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,549,652
Number of Sequences: 237096
Number of extensions: 613839
Number of successful extensions: 271
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)