Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_M16
         (880 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X89659-1|CAA61806.1|  151|Drosophila melanogaster 40S ribosomal ...    47   3e-05
AY058531-1|AAL13760.1|  139|Drosophila melanogaster LD23808p pro...    45   1e-04
AE014296-2235|AAN11844.2|  139|Drosophila melanogaster CG11271-P...    45   1e-04
AE014296-2234|AAN11845.1|  139|Drosophila melanogaster CG11271-P...    45   1e-04

>X89659-1|CAA61806.1|  151|Drosophila melanogaster 40S ribosomal
           protein S12 protein.
          Length = 151

 Score = 47.2 bits (107), Expect = 3e-05
 Identities = 29/102 (28%), Positives = 37/102 (36%)
 Frame = -1

Query: 601 TLADFEIXVPPXPXFXGXXMDVXXXLXXVXXTAXIXGGFVPGFXEXXXXFXXXXXVXXXL 422
           T+AD ++ VP         MD+   L  V   + I  G V G  +          V   L
Sbjct: 12  TMADVDVDVPSAAPVLDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCIL 71

Query: 421 XXXXXETXXXKXXXXXCXXXQIXLVKVDXXXKLGXWXGFXXI 296
                E    K     C   QI L++VD   KLG W G   I
Sbjct: 72  AESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKI 113


>AY058531-1|AAL13760.1|  139|Drosophila melanogaster LD23808p
           protein.
          Length = 139

 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 28/101 (27%), Positives = 36/101 (35%)
 Frame = -1

Query: 598 LADFEIXVPPXPXFXGXXMDVXXXLXXVXXTAXIXGGFVPGFXEXXXXFXXXXXVXXXLX 419
           +AD ++ VP         MD+   L  V   + I  G V G  +          V   L 
Sbjct: 1   MADVDVDVPSAAPVLDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCILA 60

Query: 418 XXXXETXXXKXXXXXCXXXQIXLVKVDXXXKLGXWXGFXXI 296
               E    K     C   QI L++VD   KLG W G   I
Sbjct: 61  ESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKI 101


>AE014296-2235|AAN11844.2|  139|Drosophila melanogaster CG11271-PC,
           isoform C protein.
          Length = 139

 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 28/101 (27%), Positives = 36/101 (35%)
 Frame = -1

Query: 598 LADFEIXVPPXPXFXGXXMDVXXXLXXVXXTAXIXGGFVPGFXEXXXXFXXXXXVXXXLX 419
           +AD ++ VP         MD+   L  V   + I  G V G  +          V   L 
Sbjct: 1   MADVDVDVPSAAPVLDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCILA 60

Query: 418 XXXXETXXXKXXXXXCXXXQIXLVKVDXXXKLGXWXGFXXI 296
               E    K     C   QI L++VD   KLG W G   I
Sbjct: 61  ESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKI 101


>AE014296-2234|AAN11845.1|  139|Drosophila melanogaster CG11271-PB,
           isoform B protein.
          Length = 139

 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 28/101 (27%), Positives = 36/101 (35%)
 Frame = -1

Query: 598 LADFEIXVPPXPXFXGXXMDVXXXLXXVXXTAXIXGGFVPGFXEXXXXFXXXXXVXXXLX 419
           +AD ++ VP         MD+   L  V   + I  G V G  +          V   L 
Sbjct: 1   MADVDVDVPSAAPVLDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCILA 60

Query: 418 XXXXETXXXKXXXXXCXXXQIXLVKVDXXXKLGXWXGFXXI 296
               E    K     C   QI L++VD   KLG W G   I
Sbjct: 61  ESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKI 101


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,441,935
Number of Sequences: 53049
Number of extensions: 155648
Number of successful extensions: 73
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)