Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_M14
         (844 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83104-7|CAH60780.1|  762|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z70685-2|CAA94606.2|  762|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z81565-5|CAB04583.1|  332|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z70267-8|CAA94216.1|  332|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z92838-2|CAB07408.1|  211|Caenorhabditis elegans Hypothetical pr...    28   9.5  
Z81525-1|CAB04256.1|  897|Caenorhabditis elegans Hypothetical pr...    28   9.5  
U41013-2|AAA82300.1|  557|Caenorhabditis elegans Hypothetical pr...    28   9.5  
U19615-1|AAB51351.1|  897|Caenorhabditis elegans Nucampholin pro...    28   9.5  

>Z83104-7|CAH60780.1|  762|Caenorhabditis elegans Hypothetical
           protein R07D5.2 protein.
          Length = 762

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = +2

Query: 347 LEFSIFYEKMREEAIALFKLFYYAKILNVLPNSM--LRPSLHEPXNVLIRLLHSYYPALR 520
           +E ++F+   RE+   L K ++YA+IL  +   M  L   L  P   L R L S +  +R
Sbjct: 634 IEIAVFWVNEREDIAQLSKWYHYARILAFIDPVMNPLIVILRTP--ALRRQLRSQWTTIR 691

Query: 521 HRQLRSTCSIXSY 559
            R    T S  S+
Sbjct: 692 SRASSRTRSAHSH 704


>Z70685-2|CAA94606.2|  762|Caenorhabditis elegans Hypothetical
           protein R07D5.2 protein.
          Length = 762

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = +2

Query: 347 LEFSIFYEKMREEAIALFKLFYYAKILNVLPNSM--LRPSLHEPXNVLIRLLHSYYPALR 520
           +E ++F+   RE+   L K ++YA+IL  +   M  L   L  P   L R L S +  +R
Sbjct: 634 IEIAVFWVNEREDIAQLSKWYHYARILAFIDPVMNPLIVILRTP--ALRRQLRSQWTTIR 691

Query: 521 HRQLRSTCSIXSY 559
            R    T S  S+
Sbjct: 692 SRASSRTRSAHSH 704


>Z81565-5|CAB04583.1|  332|Caenorhabditis elegans Hypothetical
           protein K04C1.6 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = -1

Query: 283 VAVLAGLDVEVLGDFVVLSFIVDLV----NVVEKRQNLLLLFDERSVNRCC 143
           + +  GL  +      +LS+IV L+    + +   Q LLLLF  ++V RCC
Sbjct: 248 IIIACGLSFKSESTDEILSWIVILIPFASDALTLTQPLLLLFFSKTVRRCC 298


>Z70267-8|CAA94216.1|  332|Caenorhabditis elegans Hypothetical
           protein K04C1.6 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = -1

Query: 283 VAVLAGLDVEVLGDFVVLSFIVDLV----NVVEKRQNLLLLFDERSVNRCC 143
           + +  GL  +      +LS+IV L+    + +   Q LLLLF  ++V RCC
Sbjct: 248 IIIACGLSFKSESTDEILSWIVILIPFASDALTLTQPLLLLFFSKTVRRCC 298


>Z92838-2|CAB07408.1|  211|Caenorhabditis elegans Hypothetical
           protein T03D8.3 protein.
          Length = 211

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -1

Query: 301 VGFHVCVAVLAGLDVEVLGDFVVLS-FIVDLVN 206
           V F V VA + GLD+E  GDFV+ S   +DL++
Sbjct: 8   VFFTVGVAAIYGLDLENAGDFVLPSGDFIDLIS 40


>Z81525-1|CAB04256.1|  897|Caenorhabditis elegans Hypothetical
           protein F33A8.1 protein.
          Length = 897

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/53 (24%), Positives = 23/53 (43%)
 Frame = +2

Query: 275 DCYTNMKAYENFMMMYKVGFLPKNLEFSIFYEKMREEAIALFKLFYYAKILNV 433
           DC    + YE F  M    F    LE+  ++EK+ ++  +        K+ N+
Sbjct: 526 DCCAQQRTYERFYGMLIERFCRLRLEYQQYFEKLCQDTYSTIHRIDITKLRNL 578


>U41013-2|AAA82300.1|  557|Caenorhabditis elegans Hypothetical
           protein T06C10.3 protein.
          Length = 557

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = +2

Query: 323 KVGFLPKNLEFSIFYEKMREEAIALFKLFYYAKILNVLPNSMLRPSLHEPXNVLIRL 493
           K+  +P+  +FSI  +K+RE     F  FY+      LP   L  +LH P + L+R+
Sbjct: 123 KLSIVPEKEDFSILEKKLRE-----FN-FYH----GFLPREDLHTTLHNPGDFLLRV 169


>U19615-1|AAB51351.1|  897|Caenorhabditis elegans Nucampholin
           protein.
          Length = 897

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/53 (24%), Positives = 23/53 (43%)
 Frame = +2

Query: 275 DCYTNMKAYENFMMMYKVGFLPKNLEFSIFYEKMREEAIALFKLFYYAKILNV 433
           DC    + YE F  M    F    LE+  ++EK+ ++  +        K+ N+
Sbjct: 526 DCCAQQRTYERFYGMLIERFCRLRLEYQQYFEKLCQDTYSTIHRIDITKLRNL 578


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,430,603
Number of Sequences: 27780
Number of extensions: 306343
Number of successful extensions: 734
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)