Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_M11
(897 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces pombe... 88 2e-18
SPBP4H10.19c |||calreticulin/calnexin homolog|Schizosaccharomyce... 42 1e-04
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 36 0.008
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.055
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.51
SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 29 0.68
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 1.2
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 4.8
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 4.8
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 4.8
SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor Thi1|Sc... 26 6.3
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 26 6.3
SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces p... 26 8.4
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 26 8.4
>SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 560
Score = 87.8 bits (208), Expect = 2e-18
Identities = 52/140 (37%), Positives = 75/140 (53%), Gaps = 8/140 (5%)
Frame = +2
Query: 290 DKGLKTSEDARFYALSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKD 466
+ GL ++A +A+S +F +P + K LVVQ+ V E+ ++CGG YLK+ + +
Sbjct: 89 EAGLVMKDEAAHHAISYEFDEPINEPEKDLVVQYEVNPEEGLNCGGAYLKLL-AEPTHGE 147
Query: 467 MHGETPYEIMFGPDICGPGTKKVHVIFSYK-------GKNHLIKKDIRCKXDVYTHLYTL 625
M Y IMFGPD CG +VH IF +K + HL + T+LYTL
Sbjct: 148 MSNSIDYRIMFGPDKCGV-NDRVHFIFKHKNPLTGEYSEKHLDSRPASLLKPGITNLYTL 206
Query: 626 IVTPDNTYEVLIDNEKVESG 685
IV PD T+EV I+ + V G
Sbjct: 207 IVKPDQTFEVRINGDVVRQG 226
>SPBP4H10.19c |||calreticulin/calnexin homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 41.9 bits (94), Expect = 1e-04
Identities = 49/181 (27%), Positives = 75/181 (41%), Gaps = 8/181 (4%)
Frame = +2
Query: 170 FEEKFPDD---SWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL-S 337
F E+F + +W S W K+ G + L S D+ GL T + + + L S
Sbjct: 33 FSEQFTSEDITTWRSRW--RAPVNKDLGVWDLVEAPG-SHLRDEYGLITLKSNKPHILIS 89
Query: 338 RKFKPFSNEGK--PLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDI 511
P + + P+V+ F VK + CG Y+ + + K++ E P I FG
Sbjct: 90 NLENPTTRQSSSVPIVLSFQVKPTKPWTCGHAYVSLVH-QSNPKNVSKEPPSVIRFGVKK 148
Query: 512 CGPGTKKVHVIFSYKGK--NHLIKKDIRCKXDVYTHLYTLIVTPDNTYEVLIDNEKVESG 685
CG I SY GK HL + T +YTL++ + T + D V +G
Sbjct: 149 CGMFDYISLSIISYDGKVSCHLYDAPPSGLVEGRTSMYTLLL-QNTTVVIRRDQSVVYTG 207
Query: 686 D 688
D
Sbjct: 208 D 208
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 35.9 bits (79), Expect = 0.008
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = -1
Query: 324 NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHE-SSGNFSSKNTSQFIE 148
N SSE F S+S SL P VN + S + ++ L S + S+ NF+S ++S +
Sbjct: 475 NYTSSEAF---STSSSLVVIPPVNSSLVTSSTSFTKFSSLSSSQLSTENFTSASSSLSLT 531
Query: 147 DNASKLTTTSTT 112
+ S L+T STT
Sbjct: 532 NAKSSLSTPSTT 543
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.1 bits (72), Expect = 0.055
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +2
Query: 767 DXPPIPXPXTPXPXRIGXXPHPXPXPXPPXPXXPRPIXSP 886
D PPIP P T P I P P P P P+ +P
Sbjct: 1030 DAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
Frame = +2
Query: 773 PPIPXPXT---PXPXRIGXXPHPXPXPXPPXPXXPRPIXSPXPP 895
PP+P P P P P P P PP P S PP
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPP 1065
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +2
Query: 773 PPIPXPXTPXPXRIGXXPHPXPXPXPPXPXXPRPIXSPXPP 895
PP+P P P P P P P P P+ S PP
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAP-PVPKPSVAAPPVPVPSGAPP 1141
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
Frame = +2
Query: 773 PPIPXPXTPXPX----RIGXXPHPXPXPXPPXPXXPRPIXSPXPP 895
PP+P P + P G P P P PP P P P PP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP-KPSVGVPPVPP 1212
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 5/46 (10%)
Frame = +2
Query: 773 PPIPXPXT--PXPXRIGXXPH---PXPXPXPPXPXXPRPIXSPXPP 895
PP+P P + P P P P P P P P P +P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +2
Query: 773 PPIPXPXTPXPX-RIGXXPHPXPXPXPPXPXXPRPIXSPXPP 895
PP+P P P + P P P P P P +P P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Frame = +2
Query: 773 PPIPXPXTPXP---XRIGXXPHPXPXPXPPXP 859
PP+P P P +G P P P PP P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.9 bits (64), Expect = 0.51
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
Frame = +2
Query: 773 PPIPX----PXTPXPXRIGXXPHPXPXPXPPXPXXPRPIXSPXPP 895
PP P P T P R P P P PP P PI S PP
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPP-PSPASAPPIPSKAPPIPSSLPP 173
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/67 (28%), Positives = 23/67 (34%), Gaps = 2/67 (2%)
Frame = +1
Query: 700 PGTSLPPXKIXGPXTPX--PXXPG*QXPYSPTPHXXTLPDWXXPSPXSTXXSPPXLXTXX 873
P TS PP P +P P P P + P SP S P +
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Query: 874 HXIPPPP 894
+PPPP
Sbjct: 199 PKVPPPP 205
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/41 (29%), Positives = 14/41 (34%)
Frame = +2
Query: 773 PPIPXPXTPXPXRIGXXPHPXPXPXPPXPXXPRPIXSPXPP 895
PP P P P + P P P P P +P P
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLP 191
>SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 29.5 bits (63), Expect = 0.68
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Frame = -1
Query: 255 NLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTT----TSTTAFIFDSQY 88
N N F + + S +SGNFS T Q DN S +T ST F S
Sbjct: 575 NSNSQRPFSTVPSESNVFSRNASGNFSMSQTHQPTTDNTSSFSTQPGRLSTGLHHFPSDR 634
Query: 87 HLLQTKDR 64
LL + R
Sbjct: 635 DLLSNQTR 642
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Frame = +2
Query: 788 PXTPXPXRIGXXPHPXPXP-XPPXPXXPRPIXSPXPP 895
P P P I P P P P PP P P P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 5/41 (12%)
Frame = +2
Query: 776 PIPXPXTPXPXRIGXXPHPXPXP-----XPPXPXXPRPIXS 883
P P P P +G P P P P PP P P P S
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVS 786
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +2
Query: 782 PXPXTPXPXRIGXXPHPXPXPXPPXPXXPRPIXSPXP 892
P P P P G P P P P P +P P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 25.8 bits (54), Expect = 8.4
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 776 PIPXPXTPXPXRIGXXPHPXPXPXPPXPXXPRPIXSPXPP 895
P P P P P P P P PP P P PP
Sbjct: 744 PAPAPI-PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/45 (31%), Positives = 16/45 (35%), Gaps = 4/45 (8%)
Frame = +2
Query: 773 PPIPXPXTPXPXRIGXXPHPXPXPXPPXPXXP----RPIXSPXPP 895
PP+ P P P P PP P P P +P PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 26.6 bits (56), Expect = 4.8
Identities = 33/128 (25%), Positives = 54/128 (42%)
Frame = -1
Query: 456 SSLQSKTLRYPPPQSMSCSCLTVNWTTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSGS 277
+SL S P S S + T ++ +PS + + A ++SS PLSSS
Sbjct: 12 TSLSSSASSSIPASSSSAAASTSLSSSSVIPSSSSSMLSSSSATAISSSSSSSPLSSSSF 71
Query: 276 LKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTAFIFD 97
PA S T L+S SS SS +++ +++ LT++S+ +
Sbjct: 72 TS--PA----------SSSFITSLVS--SSSQQSSSSSASLTSSSSATLTSSSSASPTSS 117
Query: 96 SQYHLLQT 73
S H L +
Sbjct: 118 SSSHALSS 125
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 4.8
Identities = 33/137 (24%), Positives = 59/137 (43%)
Frame = -1
Query: 516 PQMSGPNIISYGVSPCMSFCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGLPSLLNGLNLR 337
P S I S SP S SS S + S S + + + T+ + + + R
Sbjct: 336 PTSSSSTISSSSSSPSSSSFSSTTSSS---KSSSSFSSTVSSSSSTSSSTLTSSSSSSSR 392
Query: 336 ERA*NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQ 157
+ + SS + SSS S + V+ F ++ S ++ SH SS + SS ++
Sbjct: 393 PASSSSHSSSLSSHKSSSSSKSSSAPVSSAFYHN----STSSRSSSHSSSHSLSSLSSKP 448
Query: 156 FIEDNASKLTTTSTTAF 106
+ ++S L T+S+ +
Sbjct: 449 ILTASSSSLLTSSSHTY 465
>SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor
Thi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -1
Query: 324 NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFP 229
N +E F+P + SL N P +N ++ ++ P
Sbjct: 685 NSTPNEAFQPFDQTSSLYNVPGLNKSYVSNQP 716
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +2
Query: 176 EKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDA 319
+ F +D + +W EH K ++ + + FS+ DD+ + SE +
Sbjct: 49 QAFQEDEGDEDWEEEEHKPKAKRRYNTRSNESFSE-GDDEPFEVSESS 95
>SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1040
Score = 25.8 bits (54), Expect = 8.4
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -1
Query: 348 LNLRERA*NLASSEV----FKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESS 187
++LR RA L+ E+ + LS+ LK +++ FP SFP +Y + ++SS
Sbjct: 121 VDLRMRAIFLSIDEISMICIRILSAEERLKTGRSIDSGFPFSFPVHLIYDMCILNDSS 178
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 25.8 bits (54), Expect = 8.4
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 173 EEKFPDDSWESNWVYS 220
EEKFPD +W +W S
Sbjct: 251 EEKFPDIAWRVSWSLS 266
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,499,966
Number of Sequences: 5004
Number of extensions: 76127
Number of successful extensions: 314
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 286
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 452494940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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