Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_M10
         (867 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0371 + 17265691-17265788,17265873-17265971,17266586-172666...    31   1.6  
12_01_0676 + 5765154-5765241,5765329-5765453,5765533-5765604,576...    29   3.6  
09_06_0244 + 21822811-21823246,21823337-21823468,21823949-218240...    29   6.4  
06_03_0585 - 22528082-22530100                                         28   8.4  
06_03_0580 + 22489184-22491202                                         28   8.4  
02_05_0256 + 27201483-27202499,27203297-27203375,27204617-272049...    28   8.4  

>10_08_0371 + 17265691-17265788,17265873-17265971,17266586-17266628,
            17267250-17267321,17267400-17267495,17267609-17267842,
            17267914-17268097,17268247-17268358,17268447-17268533,
            17268703-17268841,17269628-17269718,17270045-17270154,
            17270309-17270413,17270982-17271055,17271379-17271454,
            17271786-17272022,17272419-17272490,17273082-17273153,
            17273240-17273304,17273306-17273383,17273384-17273486,
            17273769-17273858,17274873-17274980,17275063-17275113,
            17276126-17276203,17276284-17276346,17276944-17277140,
            17277243-17277312,17277640-17277828
          Length = 1030

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
 Frame = +1

Query: 250  VSNDCFTDEECLLSVNSLRQHHM--RLAGFKDLGYSFV--AGGNGKIYEGAGWNHIGAHT 417
            ++ DC   + CL ++N+L  +H   RL G   L    +   G NGK+ E          +
Sbjct: 877  LNKDCDIVDRCLTAINALASYHFKERLGGRGGLSSQLMESEGSNGKLQESI--------S 928

Query: 418  LHYNNISIGIGFIGDFRGEAADPAGTA 498
             H+  + + +    DFR E A  A  A
Sbjct: 929  SHFLRLLLQLLLFEDFRMELAGSAADA 955


>12_01_0676 +
           5765154-5765241,5765329-5765453,5765533-5765604,
           5765728-5765802,5765880-5765905,5766709-5766870,
           5766963-5767037,5767133-5767204,5767289-5767363,
           5767461-5767529,5767839-5767910,5768030-5768161,
           5768430-5768920,5769315-5769476,5769570-5769709,
           5769818-5770037,5770398-5770633,5771560-5772051
          Length = 927

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
 Frame = +3

Query: 567 GHQQLINTLSPGAVLQSEIE---SWXHW-LDNARKV 662
           GH  LI    PG +LQ E+E   S+ HW L+ A K+
Sbjct: 85  GHSVLIRIAVPGLILQQELEWPPSFNHWNLEQAPKL 120


>09_06_0244 + 21822811-21823246,21823337-21823468,21823949-21824037,
            21824135-21824224,21825033-21825603,21826097-21826734,
            21826978-21827098,21827223-21827337,21828234-21829723,
            21829830-21829901,21830151-21830196,21830413-21830515,
            21830591-21830674,21831035-21831475,21831651-21831746,
            21831896-21832045,21832131-21832274,21832414-21832527,
            21832621-21832803,21832901-21832945,21833058-21833192
          Length = 1764

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 71   GCKDVGCTRLYYCWCS 118
            GC+DV C+ L++ WC+
Sbjct: 1490 GCRDVNCSVLFHPWCA 1505


>06_03_0585 - 22528082-22530100
          Length = 672

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +3

Query: 519 PVGVENNLLTEDYHVVGHQQLINTLSPGAVLQS 617
           PV  E++LL + +H+ GH++  + L  G++ QS
Sbjct: 300 PVHYESSLLVQVFHIHGHERDTSGLDWGSIEQS 332


>06_03_0580 + 22489184-22491202
          Length = 672

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +3

Query: 519 PVGVENNLLTEDYHVVGHQQLINTLSPGAVLQS 617
           PV  E++LL + +H+ GH++  + L  G++ QS
Sbjct: 300 PVHYESSLLVQVFHIHGHERDTSGLDWGSIEQS 332


>02_05_0256 +
           27201483-27202499,27203297-27203375,27204617-27204946,
           27205029-27205198
          Length = 531

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +2

Query: 149 PNAAKFPSPNGVARSHVVNSP*RVLLTWW 235
           P+ A+F +P+   R H++ +    L  WW
Sbjct: 232 PSPARFTTPSATPRHHIITTKPSSLRIWW 260


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,876,481
Number of Sequences: 37544
Number of extensions: 469779
Number of successful extensions: 1220
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)