Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_M07
(1012 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 35 0.11
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 35 0.11
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 35 0.11
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 35 0.11
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 32 0.56
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.75
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 32 0.75
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.3
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 3.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 3.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 3.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 3.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.0
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 4.0
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 4.0
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 24 5.7
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 24 6.2
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 34.7 bits (76), Expect = 0.11
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -2
Query: 639 PPPXPPXGXXXXXAXXXXXXGGXXXXPPPXXGXXXXKKKXXGGGGGGXXXGG 484
PPP P G GG P P G GGGGGG GG
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGG 101
Score = 23.4 bits (48), Expect(2) = 9.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 822 GGXGGGXXGXXXPXXXXXVGVGGGG 748
GG GGG G P G GGGG
Sbjct: 40 GGCGGG-GGCAPPPAPCGGGCGGGG 63
Score = 23.0 bits (47), Expect(2) = 9.7
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = -2
Query: 639 PPPXPPXGXXXXXAXXXXXXGGXXXXPPPXXGXXXXKKKXXGGGGGGXXXGG 484
PPP P G GG G GGGGGG GG
Sbjct: 74 PPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGG----CGGGGGGCGGGG 121
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 34.7 bits (76), Expect = 0.11
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -2
Query: 639 PPPXPPXGXXXXXAXXXXXXGGXXXXPPPXXGXXXXKKKXXGGGGGGXXXGG 484
PPP P G GG P P G GGGGGG GG
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGG 101
Score = 23.4 bits (48), Expect(2) = 9.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 822 GGXGGGXXGXXXPXXXXXVGVGGGG 748
GG GGG G P G GGGG
Sbjct: 40 GGCGGG-GGCAPPPAPCGGGCGGGG 63
Score = 23.0 bits (47), Expect(2) = 9.7
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = -2
Query: 639 PPPXPPXGXXXXXAXXXXXXGGXXXXPPPXXGXXXXKKKXXGGGGGGXXXGG 484
PPP P G GG G GGGGGG GG
Sbjct: 74 PPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGG----CGGGGGGCGGGG 121
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 34.7 bits (76), Expect = 0.11
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 740 PXXPPPPTPTXXXXXGXXXPXXPPPXPPT 826
P PPPP P G P PPP PP+
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPPPS 658
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +2
Query: 740 PXXPPPPTPTXXXXXGXXXPXXPPPXPPTTXSXXXXPXAXXPR 868
P PPPPT P PPP PP++ + P P+
Sbjct: 555 PAAPPPPTRVESHGLA---PARPPPPPPSSGTRGIAPSRPLPQ 594
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 740 PXXPPPPTPTXXXXXGXXXPXXPPPXPP 823
P PPPP P PPP PP
Sbjct: 611 PPPPPPPQSFGMAPISSAAPPPPPPPPP 638
Score = 23.8 bits (49), Expect(2) = 9.7
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 500 PPPPPPXXFFFXXSXPXXGGGXXXXPP 580
PPPPPP P G G PP
Sbjct: 631 PPPPPPPPM----GLPAVGAGAPPPPP 653
Score = 22.6 bits (46), Expect(2) = 9.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 488 PXXXPPPPPP 517
P PPPPPP
Sbjct: 605 PHAVPPPPPP 614
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 34.7 bits (76), Expect = 0.11
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 740 PXXPPPPTPTXXXXXGXXXPXXPPPXPPT 826
P PPPP P G P PPP PP+
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPPPS 484
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +2
Query: 740 PXXPPPPTPTXXXXXGXXXPXXPPPXPPTTXSXXXXPXAXXPR 868
P PPPPT P PPP PP++ + P P+
Sbjct: 381 PAAPPPPTRVESHGLA---PARPPPPPPSSGTRGIAPSRPLPQ 420
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 740 PXXPPPPTPTXXXXXGXXXPXXPPPXPP 823
P PPPP P PPP PP
Sbjct: 437 PPPPPPPQSFGMAPISSAAPPPPPPPPP 464
Score = 23.8 bits (49), Expect(2) = 9.9
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 500 PPPPPPXXFFFXXSXPXXGGGXXXXPP 580
PPPPPP P G G PP
Sbjct: 457 PPPPPPPPM----GLPAVGAGAPPPPP 479
Score = 22.6 bits (46), Expect(2) = 9.9
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 488 PXXXPPPPPP 517
P PPPPPP
Sbjct: 431 PHAVPPPPPP 440
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 32.3 bits (70), Expect = 0.56
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 749 PPPPTPTXXXXXGXXXPXXPPPXPPTTXS 835
PPPP P P PPP PP T S
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPPTMS 1366
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.9 bits (69), Expect = 0.75
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 749 PPPPTPTXXXXXGXXXPXXPPPXPPTTXSXXXXPXAXXP 865
PPPP P G P PPP P T P P
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPP 161
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 31.9 bits (69), Expect = 0.75
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 749 PPPPTPTXXXXXGXXXPXXPPPXPPTTXSXXXXP 850
PPPP P P PPP PPT + P
Sbjct: 69 PPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPP 102
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 749 PPPPTPTXXXXXGXXXPXXPPPXPPTTXSXXXXP 850
PPPP P P PPP PP T P
Sbjct: 68 PPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPP 101
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +2
Query: 485 PPXXXPPPPPPXXFFFXXSXPXXGGGXXXXPPXXXXXXAXXXXXPXGGXGGG 640
PP PPPPP P GG PP P GG GG
Sbjct: 736 PPITGGPPPPPPP----GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 25.4 bits (53), Expect(2) = 3.3
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 749 PPPPTPTXXXXXGXXXPXXPPPXP 820
PPPP P P PPP P
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPP 765
Score = 22.6 bits (46), Expect(2) = 3.3
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +2
Query: 485 PPXXXPPPPPPXXFFFXXSXPXXGGGXXXXPPXXXXXXAXXXXXPXGGXGG 637
PP PPPPP P GG PP P GG
Sbjct: 707 PPITGGPPPPP-------GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +2
Query: 485 PPXXXPPPPPPXXFFFXXSXPXXGGGXXXXPPXXXXXXAXXXXXPXGGXGGG 640
PP PPPPP P GG PP P GG GG
Sbjct: 736 PPITGGPPPPPPP----GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 25.4 bits (53), Expect(2) = 3.3
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 749 PPPPTPTXXXXXGXXXPXXPPPXP 820
PPPP P P PPP P
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPP 765
Score = 22.6 bits (46), Expect(2) = 3.3
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +2
Query: 485 PPXXXPPPPPPXXFFFXXSXPXXGGGXXXXPPXXXXXXAXXXXXPXGGXGG 637
PP PPPPP P GG PP P GG
Sbjct: 707 PPITGGPPPPP-------GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +2
Query: 485 PPXXXPPPPPPXXFFFXXSXPXXGGGXXXXPPXXXXXXAXXXXXPXGGXGGG 640
PP PPPPP P GG PP P GG GG
Sbjct: 319 PPITGGPPPPPPP----GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 25.4 bits (53), Expect(2) = 3.4
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 749 PPPPTPTXXXXXGXXXPXXPPPXP 820
PPPP P P PPP P
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPP 348
Score = 22.6 bits (46), Expect(2) = 3.4
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +2
Query: 485 PPXXXPPPPPPXXFFFXXSXPXXGGGXXXXPPXXXXXXAXXXXXPXGGXGG 637
PP PPPPP P GG PP P GG
Sbjct: 290 PPITGGPPPPP-------GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG 333
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 749 PPPPTPTXXXXXGXXXPXXPPPXPPTTXSXXXXPXAXXP 865
PPPP G P PPP PP + P P
Sbjct: 543 PPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPP 581
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 740 PXXPPPPTPTXXXXXGXXXPXXPPPXPP 823
P PPPP P G P PPP PP
Sbjct: 559 PIPPPPPPPLPQNLSG--APPPPPPPPP 584
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 749 PPPPTPTXXXXXGXXXPXXPPPXPP 823
PPPP P P PPP PP
Sbjct: 498 PPPPLPPIATPSSVPPPPPPPPPPP 522
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 749 PPPPTPTXXXXXGXXXPXXPPPXPP 823
PPPP P P PPP PP
Sbjct: 496 PPPPPPLPPIATPSSVPPPPPPPPP 520
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +3
Query: 483 PPPXXAPPPPXRGXFFXXXXPPXXGGXXXXXPPXPXXXXRXXXXXPXGGG 632
PPP +PPPP G PP G PP P GG
Sbjct: 274 PPPTGSPPPPPAG----GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 319
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 485 PPXXXPPPPPPXXFFFXXSXPXXGGGXXXXPP 580
PP PPPPPP S P G G PP
Sbjct: 232 PPAGSPPPPPPP----KGSPPLAGSGSPPPPP 259
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +3
Query: 483 PPPXXAPPPPXRGXFFXXXXPPXXGGXXXXXPPXPXXXXRXXXXXPXGGG 632
PPP +PPPP G PP G PP P GG
Sbjct: 295 PPPTGSPPPPPAG----GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 340
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 485 PPXXXPPPPPPXXFFFXXSXPXXGGGXXXXPP 580
PP PPPPPP S P G G PP
Sbjct: 253 PPAGSPPPPPPP----KGSPPLAGSGSPPPPP 280
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +3
Query: 483 PPPXXAPPPPXRGXFFXXXXPPXXGGXXXXXPPXPXXXXRXXXXXPXGGG 632
PPP +PPPP G PP G PP P GG
Sbjct: 280 PPPTGSPPPPPAG----GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 325
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 485 PPXXXPPPPPPXXFFFXXSXPXXGGGXXXXPP 580
PP PPPPPP S P G G PP
Sbjct: 238 PPAGSPPPPPPP----KGSPPLAGSGSPPPPP 265
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 749 PPPPTPTXXXXXGXXXPXXPPPXPPT 826
PPPP P P PPP PP+
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPS 323
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +2
Query: 740 PXXPPPPTPTXXXXXGXXXPXXPPPXPPTTXSXXXXPXAXXPR 868
P PPPP P+ G PPP PP P PR
Sbjct: 314 PGMPPPPPPSRFGPPGMG--GMPPPPPPGMRYPGGMPPPPPPR 354
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 749 PPPPTPTXXXXXGXXXPXXPPPXPPT 826
PPPP P P PPP PP+
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPS 333
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +2
Query: 740 PXXPPPPTPTXXXXXGXXXPXXPPPXPPTTXSXXXXPXAXXPR 868
P PPPP P+ G PPP PP P PR
Sbjct: 324 PGMPPPPPPSRFGPPGMG--GMPPPPPPGMRYPGGMPPPPPPR 364
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +2
Query: 740 PXXPPPPTPTXXXXXGXXXPXXPPPXPPTTXSXXXXPXAXXPR 868
P PPPP P P PPP P T P + PR
Sbjct: 73 PPLPPPPLPLSNPPA---KPTPPPPPPKPTIRPPPIPASPPPR 112
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +2
Query: 740 PXXPPPPTPTXXXXXGXXXPXXPPPXPPTTXSXXXXPXAXXPR 868
P PPPP P P PPP P T P + PR
Sbjct: 295 PPLPPPPLPLSNPPA---KPTPPPPPPKPTIRPPPIPASPPPR 334
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 24.2 bits (50), Expect(2) = 5.7
Identities = 13/45 (28%), Positives = 13/45 (28%)
Frame = +3
Query: 486 PPXXAPPPPXRGXFFXXXXPPXXGGXXXXXPPXPXXXXRXXXXXP 620
P PPPP G P GG P P R P
Sbjct: 766 PMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGGGGP 810
Score = 23.0 bits (47), Expect(2) = 5.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 483 PPPXXAPPPP 512
PPP PPPP
Sbjct: 720 PPPGVGPPPP 729
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 24.2 bits (50), Expect(2) = 6.2
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = -2
Query: 639 PPPXPPXGXXXXXAXXXXXXGGXXXXPPPXXGXXXXKKKXXGGGGGGXXXGG 484
PPP P G GG G GGGGGG GG
Sbjct: 55 PPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGG---GCGGGGGGCGGGG 103
Score = 23.8 bits (49), Expect(2) = 8.0
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = -2
Query: 639 PPPXPPXGXXXXXAXXXXXXGGXXXXPPPXXGXXXXKKKXXGGGGGGXXXGG 484
PPP PP GG G GGGGGG GG
Sbjct: 111 PPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGG--GCGGGGGGCGGGG 160
Score = 23.0 bits (47), Expect(2) = 6.2
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 819 GXGGGXXGXXXPXXXXXVGVGGGGXXG 739
G GGG G G GGGG G
Sbjct: 23 GGGGGGGGGCGGGCGGGGGCGGGGGCG 49
Score = 23.0 bits (47), Expect(2) = 8.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 819 GXGGGXXGXXXPXXXXXVGVGGGGXXG 739
G GGG G G GGGG G
Sbjct: 80 GGGGGCGGGGGGCGGGGGGCGGGGGCG 106
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,100,943
Number of Sequences: 27780
Number of extensions: 229560
Number of successful extensions: 2560
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1912
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2657408452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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