Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_M01
(903 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 42 1e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 39 0.001
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 36 0.010
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 34 0.024
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 34 0.024
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 34 0.032
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 33 0.056
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.13
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.17
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.22
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 29 0.90
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 28 1.6
SPCC188.06c |srp54||signal recognition particle subunit Srp54|Sc... 27 2.8
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.6
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 3.6
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 26 6.4
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 41.9 bits (94), Expect = 1e-04
Identities = 22/52 (42%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +3
Query: 474 PPXPPP----PXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRP 617
PP PPP P AP P P P P PPPPP PP P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVP-PPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 31.9 bits (69), Expect = 0.13
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 4/57 (7%)
Frame = +3
Query: 468 PXPPXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXP----XPPRPXPRPXPR 626
P P PP P P P P P PPPPP P P P P+
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEPK 804
Score = 29.1 bits (62), Expect = 0.90
Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +3
Query: 561 PPPPPXXXXPXP-PRPXPRPXP 623
PPPPP P P P P P P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPP 754
Score = 27.9 bits (59), Expect = 2.1
Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +3
Query: 468 PXP-PXPPPPXXTIAPXPTPHXXHPXPXXPXT-PPPPPXXXXPXPP 599
P P P PPP P P P P P PPPPP P PP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPP----PPPGVAGAGPPPPP----PPPP 783
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 558 TPPPPPXXXXPXPPRPXPRPXP 623
+PPPPP P P P P P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVP 752
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 38.7 bits (86), Expect = 0.001
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 477 PXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXP 611
P PPPP ++ P P+ P P P + PPPP P P P
Sbjct: 1705 PTPPPPPMSVPPPPSAP---PMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 34.3 bits (75), Expect = 0.024
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +3
Query: 468 PXPPXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRPXPRXP 632
P P PP + P P P P P PPP P P P P P P
Sbjct: 1683 PAHPVSTPPVRPQSAAP-PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 29.9 bits (64), Expect = 0.52
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +3
Query: 459 SXXPXPPXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXP 611
S P P P AP P P P P + PP P PP P P
Sbjct: 1688 STPPVRPQSAAPPQMSAPTPPPPPMSVPP--PPSAPPMPAGPPSAPPPPLP 1736
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.5 bits (78), Expect = 0.010
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +3
Query: 477 PXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRPXPRXP 632
P P P I P P P P P PP P PP P P P P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 35.5 bits (78), Expect = 0.010
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3
Query: 474 PPXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXP 611
PP PPP P P P P P T PP P PP P P
Sbjct: 1189 PPVPPP--SEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 34.3 bits (75), Expect = 0.024
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +3
Query: 477 PXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRPXPRXP 632
P P P P P P P P PP P PP P P P P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Score = 33.1 bits (72), Expect = 0.056
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +3
Query: 477 PXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRPXP 623
P P P P P P P P P + PP P P P P P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPI-PTSTPPVPKSSSGAPSAPPPVPAP 1069
Score = 33.1 bits (72), Expect = 0.056
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +3
Query: 474 PPXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRPXPRXP 632
PP P P P P P P P PP P PP P P P P
Sbjct: 1112 PPVPAPSGAP--PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Score = 33.1 bits (72), Expect = 0.056
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +3
Query: 477 PXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXP 611
P P P P P P P P PP P PP P P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKP 1184
Score = 32.7 bits (71), Expect = 0.073
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +3
Query: 474 PPXPPPPXXTIAPXPTPHXXHPXPXXPXTPP-PPPXXXXPXPPRP 605
PP P P I P P P P PP P P P P+P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKP 1107
Score = 32.3 bits (70), Expect = 0.097
Identities = 20/57 (35%), Positives = 20/57 (35%), Gaps = 4/57 (7%)
Frame = +3
Query: 474 PPXPPPPXXTIAPXPTPHXXHPXPXX----PXTPPPPPXXXXPXPPRPXPRPXPRXP 632
PP P P T P P P P P P PPP P P P P P P
Sbjct: 1032 PPIPVPS--TAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Score = 32.3 bits (70), Expect = 0.097
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +3
Query: 477 PXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXP 611
P P P + P P P P P PP P PP P P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 31.9 bits (69), Expect = 0.13
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +3
Query: 477 PXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRPXPRXP 632
P P P P P P P P PP P PP P P P P
Sbjct: 1074 PSIPAPSGA-PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVP 1124
Score = 31.5 bits (68), Expect = 0.17
Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 5/60 (8%)
Frame = +3
Query: 468 PXPPXPPP-PXXTIAPXPTPHXXHPXPXXP----XTPPPPPXXXXPXPPRPXPRPXPRXP 632
P P PP P ++A P P P P PP PP P P+P P P
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 30.3 bits (65), Expect = 0.39
Identities = 18/57 (31%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = +3
Query: 468 PXPPXPPPPXXTIA--PXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRPXPRXP 632
P PP P ++A P P P P P PP P P P P+P P
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVP---VPSGAPPVPKPSVAAP 1150
Score = 30.3 bits (65), Expect = 0.39
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +3
Query: 468 PXPPXPPPPXXTIAPX-PTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXP 611
P PP P + AP P P P P PP P PP P P
Sbjct: 1126 PSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Score = 29.9 bits (64), Expect = 0.52
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +3
Query: 477 PXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRPXPRXP 632
P P P P P P P P PP P P P P+P P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPA---PSGAPPVPKPSVAAP 1169
Score = 29.1 bits (62), Expect = 0.90
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +3
Query: 474 PPXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXP 611
PP P P I P P P P P PP PP P P
Sbjct: 1083 PPVPAPSG--IPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 29.1 bits (62), Expect = 0.90
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +3
Query: 477 PXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXP 611
P P P + P P P P P P PP PP P P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPK-PSVGVPPVPPPSTAPPVPTP 1222
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/55 (27%), Positives = 16/55 (29%)
Frame = +3
Query: 468 PXPPXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRPXPRXP 632
P P P + P P P P PP PP P P P P
Sbjct: 999 PVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVP 1053
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/53 (28%), Positives = 16/53 (30%)
Frame = +3
Query: 474 PPXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRPXPRXP 632
P P P P P+ P P P P P P P P P P
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/51 (27%), Positives = 16/51 (31%)
Frame = +3
Query: 474 PPXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRPXPR 626
PP PPP +P P P P P P P P P+
Sbjct: 966 PPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPK 1016
Score = 26.2 bits (55), Expect = 6.4
Identities = 16/59 (27%), Positives = 19/59 (32%), Gaps = 6/59 (10%)
Frame = +3
Query: 474 PPXPPPPXXTIAPXPTPHXXHPXPXXPXTP------PPPPXXXXPXPPRPXPRPXPRXP 632
PP PP ++ + P P P PP P PP P P P P
Sbjct: 986 PPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVP 1044
Score = 26.2 bits (55), Expect = 6.4
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = +3
Query: 468 PXPPXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRPXP 623
P P P + AP P P P P P P P P P P
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKP 1097
Score = 26.2 bits (55), Expect = 6.4
Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 3/52 (5%)
Frame = +3
Query: 477 PXPPPPXXTIAPXPTPHXXHPXPXXP--XTPPPPPXXXXPXP-PRPXPRPXP 623
P P P + P P P P P P P P P P P P P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVP 1153
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 34.3 bits (75), Expect = 0.024
Identities = 22/59 (37%), Positives = 23/59 (38%)
Frame = -3
Query: 616 GRGXGRGGXGXXXLGGGGGVXGXXGXGXXXWGVGXGAIVXXGGGGXGGXGQXEGXGRXP 440
G G GG G G GG G G G G G G + GGG GG G G P
Sbjct: 215 GEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGG--LGGFGGGPGGFGGGPGGHGGP 271
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Frame = -3
Query: 604 GRGGXGXXXLGGGGG--VXGXXGXGXXXWGVGXGAIVXXGGGGXGGXGQXEG 455
G G G GGG G G G G G G GG GG G EG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEG 235
Score = 27.5 bits (58), Expect = 2.8
Identities = 24/70 (34%), Positives = 24/70 (34%), Gaps = 6/70 (8%)
Frame = -3
Query: 631 GXRGXGRGXGRGGXGXXXLGGGGGVXGXX----GXGXXXWGVGX--GAIVXXGGGGXGGX 470
G G G G G G GG GG G G G G G G GGG G
Sbjct: 189 GFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFG 248
Query: 469 GQXEGXGRXP 440
G G G P
Sbjct: 249 GGLGGFGGGP 258
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 34.3 bits (75), Expect = 0.024
Identities = 23/62 (37%), Positives = 25/62 (40%)
Frame = -3
Query: 631 GXRGXGRGXGRGGXGXXXLGGGGGVXGXXGXGXXXWGVGXGAIVXXGGGGXGGXGQXEGX 452
G RG GRG GG G GG GG G G G G GG GG G +G
Sbjct: 13 GSRG-GRGGFNGGRGGFG-GGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Query: 451 GR 446
+
Sbjct: 71 AK 72
Score = 33.9 bits (74), Expect = 0.032
Identities = 27/61 (44%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = -3
Query: 631 GXRGXGRGXGRGGXGXXXLGGGGGVXGXXGXGXXXWGVGXGAIVXXG--GGGXGGXGQXE 458
G RG GRG RGG G GG GG G G G G GA G GG GG G
Sbjct: 6 GSRG-GRGGSRGGRGGFN-GGRGGFGG--GRGGARGGGRGGARGGRGGRGGARGGRGGSS 61
Query: 457 G 455
G
Sbjct: 62 G 62
Score = 31.5 bits (68), Expect = 0.17
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -3
Query: 631 GXRGXGRGXGRGGXGXXXLGGGGGVXGXXGXGXXXWGVGXGAIV 500
G RG RG GRGG G GG G G G GA V
Sbjct: 30 GGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAKV 73
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.9 bits (74), Expect = 0.032
Identities = 19/55 (34%), Positives = 21/55 (38%)
Frame = +3
Query: 468 PXPPXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRPXPRXP 632
P P PP P + P PT P P PPP P P P + P P P
Sbjct: 125 PSAPAPPTPQSELRP-PTS-----APPRPSIPPPSPASAPPIPSKAPPIPSSLPP 173
Score = 30.7 bits (66), Expect = 0.30
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = +3
Query: 459 SXXPXPPXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRPXPRXP 632
S P P PPP + P P+ P P P P P P P P P
Sbjct: 142 SAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP-SLPSAVPPMP 198
Score = 30.7 bits (66), Expect = 0.30
Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 6/64 (9%)
Frame = +3
Query: 459 SXXPXPPXPPPPXXTIAPXPTPHXXHPX--PXXPXTPPPP----PXXXXPXPPRPXPRPX 620
S P P PP + AP P P P P P PP P P PP+ P P
Sbjct: 148 SIPPPSPASAPPIPSKAP-PIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPL 206
Query: 621 PRXP 632
+ P
Sbjct: 207 SQAP 210
Score = 29.1 bits (62), Expect = 0.90
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +3
Query: 474 PPXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRPXPRXP 632
PP PP +I P P+P P P PP P P P + P P
Sbjct: 139 PPTSAPPRPSIPP-PSPASAPPIPSK--APPIPSSLPPPAQPAAPVKSPPSAP 188
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 33.1 bits (72), Expect = 0.056
Identities = 23/54 (42%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -3
Query: 604 GRGGXGXXXLGGGGGVXGXXGXGXXXWGVGXGAIVXXGGGGXGG-XGQXEGXGR 446
GRGG G GG GG G G G G G G+ GGG GG G G R
Sbjct: 136 GRGGRGGFR-GGRGGSRGGFG-GNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSR 187
Score = 31.5 bits (68), Expect = 0.17
Identities = 20/48 (41%), Positives = 21/48 (43%)
Frame = -3
Query: 616 GRGXGRGGXGXXXLGGGGGVXGXXGXGXXXWGVGXGAIVXXGGGGXGG 473
GRG RGG G G GG G G G G G G+ GG GG
Sbjct: 139 GRGGFRGGRGGSRGGFGGNSRGGFGGGSRG-GFGGGSRGGSRGGFRGG 185
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 543 PXXPXTPPPPPXXXXPXPPRPXPRP 617
P P PPPPP P P P P P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 552 PXTPPPPPXXXXPXPPRPXPRPXP 623
P PPPPP PP P P P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 561 PPPPPXXXXPXPPRPXPRPXP 623
PPPPP P +P P P P
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 31.5 bits (68), Expect = 0.17
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 6/52 (11%)
Frame = +3
Query: 468 PXPPXPPPPXXTIAPXPTPHXXHPXP------XXPXTPPPPPXXXXPXPPRP 605
P P PPPP T+ P T P P PPP PPRP
Sbjct: 234 PLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRP 285
Score = 29.9 bits (64), Expect = 0.52
Identities = 18/59 (30%), Positives = 19/59 (32%), Gaps = 4/59 (6%)
Frame = +3
Query: 468 PXPPXPPPPXX----TIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRPXPRXP 632
P PP PPPP A P + P PP P P P P P P
Sbjct: 189 PPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTLP 247
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +3
Query: 468 PXPPXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPP 575
P PPP P P P PPPPP
Sbjct: 161 PNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.22
Identities = 23/54 (42%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 474 PPXPP-PPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRPXPRXP 632
P PP PP IAP P P P PP PP P PP P P P P P
Sbjct: 444 PAAPPLPPSAPIAP-PLP------AGMPAAPPLPPAA--PAPP-PAPAPAPAAP 487
Score = 30.3 bits (65), Expect = 0.39
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +3
Query: 474 PPXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXP 611
PP PPP P P P PPPPP P R P
Sbjct: 338 PPPPPPRSNAAGSIPLP------PQGRSAPPPPPPRSAPSTGRQPP 377
Score = 30.3 bits (65), Expect = 0.39
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 3/53 (5%)
Frame = +3
Query: 474 PPXPPPPXXTIAPXPTPHXXHPXPXXPXTPP--PP-PXXXXPXPPRPXPRPXP 623
PP PP AP P P P + P PP P PP P P P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Score = 29.5 bits (63), Expect = 0.68
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +3
Query: 474 PPXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRP 617
PP PP + P P P P P PPP PP PRP
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPP-PI--PPPSNGTVSSPPNSPPRP 274
Score = 29.5 bits (63), Expect = 0.68
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 4/57 (7%)
Frame = +3
Query: 474 PPXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPP----XXXXPXPPRPXPRPXPRXP 632
PP PPP P + P PPPPP P PP+ P P P
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPP--PPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +3
Query: 468 PXPPXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRP 605
P P PP P P P P P P PPP P P P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAP-PLPPAAPAPPP-APAPAPAAP 487
Score = 27.1 bits (57), Expect = 3.6
Identities = 19/63 (30%), Positives = 20/63 (31%), Gaps = 5/63 (7%)
Frame = +3
Query: 459 SXXPXPPXPPPPXXTIAPXPTPHXXHPXPXXPXTPP-----PPPXXXXPXPPRPXPRPXP 623
S P PP P P P P P P + P PPP P P P P
Sbjct: 335 SLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNP-PAPPP 393
Query: 624 RXP 632
P
Sbjct: 394 AIP 396
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/48 (29%), Positives = 15/48 (31%)
Frame = +3
Query: 489 PPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRPXPRXP 632
PP + TP P P PP P P P P P P
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 26.2 bits (55), Expect = 6.4
Identities = 15/50 (30%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Frame = +3
Query: 474 PPXPPPPXXTIAPXPT--PHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRP 617
PP P PP + P+ P P PP P PP P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP 464
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 29.1 bits (62), Expect = 0.90
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = +3
Query: 474 PPXPPPPXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRPXP 623
P P P + P PH H P T PPP P P+ P
Sbjct: 184 PVIPNLPKLQVHPNRLPHPIHNHPYSSPTSYPPPLCPATYCPSNPPQLAP 233
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 4/49 (8%)
Frame = +3
Query: 483 PPPPXXTIAPX----PTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRP 617
P PP +AP P P P P P PP P P RP
Sbjct: 575 PQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRP 623
>SPCC188.06c |srp54||signal recognition particle subunit
Srp54|Schizosaccharomyces pombe|chr 3|||Manual
Length = 522
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -3
Query: 577 LGGGGGVXGXXGXGXXXWGVGXGAIVXXGGGGXGGXGQXEGXG 449
+G GGG+ G + A + GGGG GG G + G
Sbjct: 465 MGMGGGMPGLNPGSMNFGDISKMANMLMGGGGPGGAGGMDFSG 507
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/42 (33%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Frame = +3
Query: 510 PXPTPHXXHPXPXXPXTPPPP-PXXXXPXPPRPXPRPXPRXP 632
P P P P P PP P P P P P P P
Sbjct: 104 PREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEP 145
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.1 bits (57), Expect = 3.6
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = +3
Query: 492 PXXTIAPXPTPHXXHPXPXXPXTPPPPPXXXXPXPPRPXPRP 617
P T AP PTP P P PPPPP P P P P
Sbjct: 725 PQVTPAP-PTPA---PTPAVKHHPPPPPVRSSISPSMP-PAP 761
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 558 TPPPPPXXXXPXPPRPXPRP 617
+PPPPP PRP +P
Sbjct: 418 SPPPPPISSSSTTPRPDDKP 437
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,551,861
Number of Sequences: 5004
Number of extensions: 23740
Number of successful extensions: 450
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 293
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 456499320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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