Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_L08
         (844 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024808-5|AAK29931.1|  789|Caenorhabditis elegans Hypothetical ...    29   5.5  
Z73098-9|CAA97335.1|  141|Caenorhabditis elegans Hypothetical pr...    28   7.2  

>AC024808-5|AAK29931.1|  789|Caenorhabditis elegans Hypothetical
           protein Y53G8AM.8 protein.
          Length = 789

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 529 IVPELTDIKTSLIADSKKYNIYFANSAGIFVLTN 630
           I+P + D++ S++ +SK YN Y A S G    +N
Sbjct: 176 IMPPMEDVQESIVKESKTYN-YAAASGGSLPFSN 208


>Z73098-9|CAA97335.1|  141|Caenorhabditis elegans Hypothetical
           protein T21C9.8 protein.
          Length = 141

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -3

Query: 773 KTSSNIPPFSLMKKIAFGVEKYNLSSKSLANPLTGITCKC 654
           K   +IP +++     FGV+ Y++ + +LA+  +G T  C
Sbjct: 100 KLRIDIPHYAINSGQNFGVDNYDIGTLNLADQFSGETTDC 139


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,200,478
Number of Sequences: 27780
Number of extensions: 421628
Number of successful extensions: 1110
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)