Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_L05
(855 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein. 134 3e-33
AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein. 132 1e-32
AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein. 132 1e-32
U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein. 132 2e-32
AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase... 71 6e-14
L76038-1|AAC27383.1| 683|Anopheles gambiae prophenoloxidase pro... 70 8e-14
AF031626-1|AAD01936.1| 683|Anopheles gambiae prophenoloxidase p... 70 8e-14
AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase p... 69 2e-13
AF004916-1|AAB94672.1| 686|Anopheles gambiae pro-phenol oxidase... 68 4e-13
AJ459962-1|CAD31061.1| 685|Anopheles gambiae prophenoloxidase 9... 60 1e-10
AJ459960-1|CAD31059.1| 696|Anopheles gambiae prophenoloxidase 7... 55 2e-09
AJ010193-1|CAA09032.1| 684|Anopheles gambiae prophenoloxidase p... 52 2e-08
AJ459961-1|CAD31060.1| 700|Anopheles gambiae prophenoloxidase 8... 52 3e-08
AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase p... 52 3e-08
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona... 25 2.2
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 23 9.0
AY070255-1|AAL59654.1| 230|Anopheles gambiae glutathione S-tran... 23 9.0
>AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 134 bits (324), Expect = 3e-33
Identities = 78/224 (34%), Positives = 116/224 (51%), Gaps = 4/224 (1%)
Frame = +1
Query: 139 PST-IKTKNVDAVFVEKQKKILSFFQDVSQLNTDDEYYKIGKDYDIEMNMDNYTNKKAVE 315
PST + K D F+ KQK +++ DEY K + + Y + V
Sbjct: 22 PSTKFEAKYADKEFLFKQKFFFEVLRNIHLPLKYDEYIPYTKTWVSDET--KYNDFAQVA 79
Query: 316 EFLKMYRTG-FMPKNLEFSVFYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQ 492
EF Y+TG F+ K FS++ ++ + A+F Y + D++T+YK +AR ++N+G
Sbjct: 80 EFFDYYKTGAFLEKGELFSIYNEQYLRQTYAVFTFLYNSADWDTYYKNMIWARDNINEGM 139
Query: 493 FLYAFYIAVIQRSDCHGFVVPAPYEVYPKMFMNMEVLQKIYVTKMQDGLINPEAAAKYGI 672
F+Y ++ V+ R D G V+PA YE+YP F N +V++ I K+ D KY I
Sbjct: 140 FIYVLHLTVMHRPDLQGIVLPAIYEIYPYYFFNTDVIRTINYKKLYDPKFGFYGNGKYNI 199
Query: 673 HKENDYFVYKANYSNAVLYNN--EEQRLTYFTEDIGMNAYYYYF 798
N Y +Y YNN E+ L Y+TEDIG+NAYYYYF
Sbjct: 200 VYANYTATYPMDY-----YNNFYTEEYLNYYTEDIGLNAYYYYF 238
>AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 132 bits (319), Expect = 1e-32
Identities = 81/227 (35%), Positives = 119/227 (52%), Gaps = 7/227 (3%)
Frame = +1
Query: 139 PST-IKTKNVDAVFVEKQKKILSFFQDVSQLNTDDEYYKIGKDYDIEMNMDNYTNKKAVE 315
PST + K D F+ KQK +++ DEY K + + Y + V
Sbjct: 22 PSTKFEAKYADKEFLFKQKFFFEVLRNIHLPLKYDEYIPYTKTWVSDET--KYNDFAQVA 79
Query: 316 EFLKMYRTG-FMPKNLEFSVFYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQ 492
EF Y+TG F+ K FS++ ++ + A+F Y + D++T+YK +AR ++N+G
Sbjct: 80 EFFDYYKTGAFLEKGELFSIYNEQYLRQTYAVFTFLYNSADWDTYYKNMIWARDNINEGM 139
Query: 493 FLYAFYIAVIQRSDCHGFVVPAPYEVYPKMFMNMEVLQKIYVTKMQDGLINPEAAAKYGI 672
F+Y ++ V+ R D G V+PA YE+YP F N +V++ I K L NP K+G
Sbjct: 140 FIYVLHLTVMHRPDLQGIVLPAIYEIYPYYFFNTDVIRTINYKK----LYNP----KFGF 191
Query: 673 HKENDYFVYKANYSNAV---LYNN--EEQRLTYFTEDIGMNAYYYYF 798
+ Y V ANY+ YNN E+ L Y TEDIG+NAYYYYF
Sbjct: 192 YGNGKYNVVYANYTATYPMDYYNNFYTEEYLNYNTEDIGLNAYYYYF 238
>AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 132 bits (319), Expect = 1e-32
Identities = 81/227 (35%), Positives = 119/227 (52%), Gaps = 7/227 (3%)
Frame = +1
Query: 139 PST-IKTKNVDAVFVEKQKKILSFFQDVSQLNTDDEYYKIGKDYDIEMNMDNYTNKKAVE 315
PST + K D F+ KQK +++ DEY K + + Y + V
Sbjct: 22 PSTKFEAKYADKEFLFKQKFFFEVLRNIHLPLKYDEYIPYTKTWVSDET--KYNDFAQVA 79
Query: 316 EFLKMYRTG-FMPKNLEFSVFYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQ 492
EF Y+TG F+ K FS++ ++ + A+F Y + D++T+YK +AR ++N+G
Sbjct: 80 EFFDYYKTGAFLEKGELFSIYNEQYLRQTYAVFTFLYNSADWDTYYKNMIWARDNINEGM 139
Query: 493 FLYAFYIAVIQRSDCHGFVVPAPYEVYPKMFMNMEVLQKIYVTKMQDGLINPEAAAKYGI 672
F+Y ++ V+ R D G V+PA YE+YP F N +V++ I K L NP K+G
Sbjct: 140 FIYVLHLTVMHRPDLQGIVLPAIYEIYPYYFFNTDVIRTINYKK----LYNP----KFGF 191
Query: 673 HKENDYFVYKANYSNAV---LYNN--EEQRLTYFTEDIGMNAYYYYF 798
+ Y V ANY+ YNN E+ L Y TEDIG+NAYYYYF
Sbjct: 192 YGNGKYNVVYANYTATYPMDYYNNFYTEEYLNYNTEDIGLNAYYYYF 238
>U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein.
Length = 692
Score = 132 bits (318), Expect = 2e-32
Identities = 78/224 (34%), Positives = 115/224 (51%), Gaps = 4/224 (1%)
Frame = +1
Query: 139 PST-IKTKNVDAVFVEKQKKILSFFQDVSQLNTDDEYYKIGKDYDIEMNMDNYTNKKAVE 315
PST + K D F+ KQK +++ DEY K + + Y + V
Sbjct: 22 PSTKFEAKYADKEFLFKQKFFFEVLRNIHLPLKYDEYIPYTKTWVSDET--KYNDFAQVA 79
Query: 316 EFLKMYRTG-FMPKNLEFSVFYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQ 492
EF Y+TG F+ K FS++ ++ + A+F Y + D++T+YK +AR ++N+G
Sbjct: 80 EFFDYYKTGAFLEKGELFSIYNEQYLRQTYAVFTFLYNSADWDTYYKNMIWARDNINEGM 139
Query: 493 FLYAFYIAVIQRSDCHGFVVPAPYEVYPKMFMNMEVLQKIYVTKMQDGLINPEAAAKYGI 672
F+Y ++ V+ R D G V+PA YE+YP F N +V++ I K+ D KY I
Sbjct: 140 FIYVLHLTVMHRPDLQGIVLPAIYEIYPYYFFNTDVIRTINYKKLYDPKFGFYGNGKYNI 199
Query: 673 HKENDYFVYKANYSNAVLYNN--EEQRLTYFTEDIGMNAYYYYF 798
N Y +Y YNN E+ L Y TEDIG+NAYYYYF
Sbjct: 200 VYANYTATYPMDY-----YNNFYTEEYLNYNTEDIGLNAYYYYF 238
>AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase
subunit 1 protein.
Length = 688
Score = 70.5 bits (165), Expect = 6e-14
Identities = 56/196 (28%), Positives = 88/196 (44%), Gaps = 4/196 (2%)
Frame = +1
Query: 238 DEYYKIGKDYDIEMNMDNYTNKKAVEEFLKMYRTGF---MPKNLEFSVFYDKMRDEAIAL 408
D Y IG D ++ N ++ + M F + + FS+F K RD A AL
Sbjct: 38 DRYRAIGAD--LQSRFSNDAEQRIPVRSVPMPDLSFANGIDRRGAFSLFAPKHRDAAGAL 95
Query: 409 FHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVPAPYEVYPKMFM 588
+LF DF T A + R LN F Y+ +AV R D +P+ ++P F+
Sbjct: 96 INLFLQQPDFATLMSVATYCRDRLNPVLFQYSLAVAVQHREDTKDVNIPSIVSLFPDQFV 155
Query: 589 NMEVLQKIYVTKMQDGLINPEAAAKYGIHKENDYFV-YKANYSNAVLYNNEEQRLTYFTE 765
+ V K+ E AA + +EN + NY+ + +EQR+ YF E
Sbjct: 156 DPAVFPKL----------REEGAA---VQQENRMVIDIPPNYTASD--REDEQRMAYFRE 200
Query: 766 DIGMNAYYYYFHSHLP 813
DIG+N +++++H P
Sbjct: 201 DIGVNMHHWHWHLVYP 216
>L76038-1|AAC27383.1| 683|Anopheles gambiae prophenoloxidase
protein.
Length = 683
Score = 70.1 bits (164), Expect = 8e-14
Identities = 46/152 (30%), Positives = 77/152 (50%)
Frame = +1
Query: 361 EFSVFYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCH 540
+FS+F + R A L +F ++ E A FAR +N F YA +A++ R D H
Sbjct: 79 QFSLFIPRHRKIAARLIDIFMGMRNVEDLQSCAVFARDRINPYLFNYALSVALLHRKDTH 138
Query: 541 GFVVPAPYEVYPKMFMNMEVLQKIYVTKMQDGLINPEAAAKYGIHKENDYFVYKANYSNA 720
+P EV+P +++ +V +I ++ + PE G+ V +Y+ +
Sbjct: 139 DLDLPTIIEVFPDKYVDSKVFSQI----REEATVVPE-----GMRMP---IVIPKDYTAS 186
Query: 721 VLYNNEEQRLTYFTEDIGMNAYYYYFHSHLPF 816
L +EE RL YF EDIG+N +++++H PF
Sbjct: 187 DL--DEEHRLWYFREDIGVNLHHWHWHLVYPF 216
>AF031626-1|AAD01936.1| 683|Anopheles gambiae prophenoloxidase
protein.
Length = 683
Score = 70.1 bits (164), Expect = 8e-14
Identities = 46/152 (30%), Positives = 77/152 (50%)
Frame = +1
Query: 361 EFSVFYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCH 540
+FS+F + R A L +F ++ E A FAR +N F YA +A++ R D H
Sbjct: 79 QFSLFIPRHRKIAARLIDIFMGMRNVEDLQSCAVFARDRINPYLFNYALSVALLHRKDTH 138
Query: 541 GFVVPAPYEVYPKMFMNMEVLQKIYVTKMQDGLINPEAAAKYGIHKENDYFVYKANYSNA 720
+P EV+P +++ +V +I ++ + PE G+ V +Y+ +
Sbjct: 139 DLDLPTIIEVFPDKYVDSKVFSQI----REEATVVPE-----GMRMP---IVIPKDYTAS 186
Query: 721 VLYNNEEQRLTYFTEDIGMNAYYYYFHSHLPF 816
L +EE RL YF EDIG+N +++++H PF
Sbjct: 187 DL--DEEHRLWYFREDIGVNLHHWHWHLVYPF 216
>AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase
protein.
Length = 687
Score = 68.5 bits (160), Expect = 2e-13
Identities = 41/156 (26%), Positives = 75/156 (48%)
Frame = +1
Query: 346 MPKNLEFSVFYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQ 525
+P+ +FS+F K R A L LF D +T + +AR LN + YA +A+
Sbjct: 75 LPRRGDFSLFIPKHRKIAGDLIKLFLDQPDVDTLMSVSSYARDRLNPVLYQYAMAVAIQH 134
Query: 526 RSDCHGFVVPAPYEVYPKMFMNMEVLQKIYVTKMQDGLINPEAAAKYGIHKENDYFVYKA 705
R D +P+ ++++P F++ V+ K+ ++G + ++ + D
Sbjct: 135 RPDTKNLNIPSFFDLFPDSFVDPTVIPKL----REEGAV---------VNNQRDRITIDI 181
Query: 706 NYSNAVLYNNEEQRLTYFTEDIGMNAYYYYFHSHLP 813
+ +EQRL YF EDIG+N +++++H P
Sbjct: 182 AMNYTASDREDEQRLAYFREDIGVNLHHWHWHLVYP 217
>AF004916-1|AAB94672.1| 686|Anopheles gambiae pro-phenol oxidase
subunit 2 protein.
Length = 686
Score = 67.7 bits (158), Expect = 4e-13
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 1/157 (0%)
Frame = +1
Query: 346 MPKNLEFSVFYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQ 525
+P+ FS+F K R A L +LF D ET A ++R LN F YA +A+
Sbjct: 75 VPRRGGFSLFNPKHRQIAGDLINLFMNQPDVETLMSVAAYSRDRLNPILFQYALSVAIQH 134
Query: 526 RSDCHGFVVPAPYEVYPKMFMNMEVLQKIYVTKMQDGLINPEAAAKYGIHKENDYFV-YK 702
R D +P+ E++P F++ V K+ ++G I + EN +
Sbjct: 135 RPDTKDLNIPSFLELFPDSFVDPSVFPKL----REEGAI---------VQAENRMTIDIP 181
Query: 703 ANYSNAVLYNNEEQRLTYFTEDIGMNAYYYYFHSHLP 813
NY+ + +EQRL YF EDIG+N +++++H P
Sbjct: 182 MNYTASD--REDEQRLAYFREDIGVNLHHWHWHLVYP 216
>AJ459962-1|CAD31061.1| 685|Anopheles gambiae prophenoloxidase 9
protein.
Length = 685
Score = 59.7 bits (138), Expect = 1e-10
Identities = 42/159 (26%), Positives = 74/159 (46%)
Frame = +1
Query: 337 TGFMPKNLEFSVFYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIA 516
T +P++ EF++F R A L D + A +AR LN F YA +A
Sbjct: 73 TARVPRHGEFNLFNPAQRQVAGRLVGDLLSQPDPQAMLSVAAYARDRLNPTLFQYALAVA 132
Query: 517 VIQRSDCHGFVVPAPYEVYPKMFMNMEVLQKIYVTKMQDGLINPEAAAKYGIHKENDYFV 696
++ R D VP+ E++P F++ + K+ +++G + + + I +
Sbjct: 133 LVHRKDTGNVPVPSFLEMFPTRFVDPALFPKL----VEEGFV-VQQGERVAIEVPPSFSA 187
Query: 697 YKANYSNAVLYNNEEQRLTYFTEDIGMNAYYYYFHSHLP 813
+A + EQRL YF EDIG+N +++++H P
Sbjct: 188 SEA---------DPEQRLAYFREDIGVNLHHWHWHLVYP 217
>AJ459960-1|CAD31059.1| 696|Anopheles gambiae prophenoloxidase 7
protein.
Length = 696
Score = 55.2 bits (127), Expect = 2e-09
Identities = 46/156 (29%), Positives = 72/156 (46%)
Frame = +1
Query: 346 MPKNLEFSVFYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQ 525
+P+ FS+F + R A L LF D +T A +AR LN F YA A++
Sbjct: 89 VPRRGAFSLFIPEHRVIAGRLIKLFLDQPDADTLGDVAAYARDRLNGPLFQYALASALLH 148
Query: 526 RSDCHGFVVPAPYEVYPKMFMNMEVLQKIYVTKMQDGLINPEAAAKYGIHKENDYFVYKA 705
RSD VP+ ++P F++ +I + ++ P + I +Y
Sbjct: 149 RSDTSDVPVPSFLHLFPDQFIDPAAFPQI--REEGRAVLQPN---RMSIDIPLNY----- 198
Query: 706 NYSNAVLYNNEEQRLTYFTEDIGMNAYYYYFHSHLP 813
S+ V EQRL YF EDIG+N +++++H P
Sbjct: 199 TASDRV----TEQRLAYFREDIGVNLHHWHWHLVYP 230
>AJ010193-1|CAA09032.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 52.0 bits (119), Expect = 2e-08
Identities = 38/150 (25%), Positives = 73/150 (48%)
Frame = +1
Query: 364 FSVFYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHG 543
FS+F+ + A L LF + +T A F R +N F YA +A++ R+D
Sbjct: 82 FSIFHPSHQRVASQLIELFLEQSNPDTLTAMAVFVRDRVNGPLFQYALSVALMHRTDTRD 141
Query: 544 FVVPAPYEVYPKMFMNMEVLQKIYVTKMQDGLINPEAAAKYGIHKENDYFVYKANYSNAV 723
+P+ E++P +++ V ++ ++G + + + I ++ S+ V
Sbjct: 142 VEIPSFLELFPDRYVDPAVFPQL----REEGTLVDQGDRR-AIEIPMNFTA-----SDRV 191
Query: 724 LYNNEEQRLTYFTEDIGMNAYYYYFHSHLP 813
+EQRL Y+ EDIG+N +++++H P
Sbjct: 192 ----DEQRLAYWREDIGVNLHHWHWHLVYP 217
>AJ459961-1|CAD31060.1| 700|Anopheles gambiae prophenoloxidase 8
protein.
Length = 700
Score = 51.6 bits (118), Expect = 3e-08
Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 1/171 (0%)
Frame = +1
Query: 304 KAVEEFLKMYRTGFMPKNLEFSVFYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLN 483
K ++E + ++ + FS+F + R A L LF + + A +AR LN
Sbjct: 76 KDLDELPDLTFATWIKRRDSFSLFNPEHRKAAGKLTKLFLDQPNADRLVDVAAYARDRLN 135
Query: 484 QGQFLYAFYIAVIQRSDCHGFVVPAPYEVYPKMFMNMEVLQKIYVTKMQDGLINPEAAAK 663
F YA +A++ R D VP+ ++P F++ V M++G I
Sbjct: 136 APLFQYALSVALLHRPDTKSVSVPSLLHLFPDQFID----PAAQVRMMEEGSI------- 184
Query: 664 YGIHKENDYFV-YKANYSNAVLYNNEEQRLTYFTEDIGMNAYYYYFHSHLP 813
+ EN + NY+ EQR+ +F EDIG+N +++++H P
Sbjct: 185 --VLDENRMPIPIPMNYT--ATDAEPEQRMAFFREDIGVNLHHWHWHLVYP 231
>AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 51.6 bits (118), Expect = 3e-08
Identities = 41/150 (27%), Positives = 71/150 (47%)
Frame = +1
Query: 364 FSVFYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHG 543
FSVF R A L LF + T A + R +N F YA IA+I R D
Sbjct: 82 FSVFNAAHRRAAGQLIQLFLDQPNPTTLGAVAAYVRDRVNAPMFQYALAIALIHRDDTRD 141
Query: 544 FVVPAPYEVYPKMFMNMEVLQKIYVTKMQDGLINPEAAAKYGIHKENDYFVYKANYSNAV 723
+P+ E++P F++ V ++ + + L+ + + I ++Y S+ V
Sbjct: 142 VEIPSFLELFPDRFVDPAVFPQL---REESNLL--DRGNRRAIDIPSNYTA-----SDRV 191
Query: 724 LYNNEEQRLTYFTEDIGMNAYYYYFHSHLP 813
+EQR+ Y+ EDIG++ +++++H P
Sbjct: 192 ----DEQRVAYWREDIGLSLHHWHWHLVYP 217
>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
anion exchanger protein.
Length = 1102
Score = 25.4 bits (53), Expect = 2.2
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 652 AAAKYGIHKENDYFVYKANYSNAVLYNNEEQRLTYFTEDIGMN 780
++A G+H+E + + + A+LY +++QR Y G N
Sbjct: 263 SSAPSGMHEEGESALGPVSPQTALLYGSKDQRGHYLALPTGEN 305
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 23.4 bits (48), Expect = 9.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 447 LQDCLFCACASQSRSILVCLLHRCY 521
LQDC+ C+ R+ L + +CY
Sbjct: 792 LQDCIEIFCSWCKRNGLTICIEKCY 816
>AY070255-1|AAL59654.1| 230|Anopheles gambiae glutathione
S-transferase E5 protein.
Length = 230
Score = 23.4 bits (48), Expect = 9.0
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 385 MRDE-AIALFHLFYYAKDFETFYKTACFARVHLNQG 489
+RD AI ++ + Y KD +T Y AR +N G
Sbjct: 68 VRDSHAIIIYLVQKYGKDGQTLYPEDPIARAKVNAG 103
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 831,783
Number of Sequences: 2352
Number of extensions: 16805
Number of successful extensions: 86
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90959220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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