Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_L04
         (804 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC062716-1|AAH62716.1|  140|Homo sapiens ribosomal protein L23 p...   182   1e-45
X55954-1|CAA39417.1|  140|Homo sapiens HL23 ribosomal protein pr...   182   1e-45
X52839-1|CAA37023.1|  140|Homo sapiens ribosomal protein L17 pro...   182   1e-45
BC106061-1|AAI06062.1|  140|Homo sapiens RPL23 protein protein.       182   1e-45
BC104651-1|AAI04652.1|  140|Homo sapiens ribosomal protein L23 p...   182   1e-45
BC010114-1|AAH10114.1|  140|Homo sapiens ribosomal protein L23 p...   182   1e-45
BC003518-1|AAH03518.1|  134|Homo sapiens Similar to ribosomal pr...   182   1e-45
AB061827-1|BAB79465.1|  140|Homo sapiens ribosomal protein L23 p...   182   1e-45
BC034378-1|AAH34378.1|   77|Homo sapiens RPL23 protein protein.        71   7e-12

>BC062716-1|AAH62716.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  182 bits (444), Expect = 1e-45
 Identities = 85/94 (90%), Positives = 90/94 (95%)
 Frame = +2

Query: 200 KXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 379
           K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNA
Sbjct: 43  KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVRPAVVIRQRKSYRRKDGVFLYFEDNA 102

Query: 380 GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA 481
           GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA
Sbjct: 103 GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA 136



 Score = 70.5 bits (165), Expect = 7e-12
 Identities = 31/35 (88%), Positives = 35/35 (100%)
 Frame = +1

Query: 100 AGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQG 204
           +GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+G
Sbjct: 10  SGAKFRISLGLPVGAVINCADNTGAKNLYIISVKG 44


>X55954-1|CAA39417.1|  140|Homo sapiens HL23 ribosomal protein
           protein.
          Length = 140

 Score =  182 bits (443), Expect = 1e-45
 Identities = 85/94 (90%), Positives = 90/94 (95%)
 Frame = +2

Query: 200 KXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 379
           K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNA
Sbjct: 43  KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 102

Query: 380 GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA 481
           GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA
Sbjct: 103 GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA 136



 Score = 70.5 bits (165), Expect = 7e-12
 Identities = 31/35 (88%), Positives = 35/35 (100%)
 Frame = +1

Query: 100 AGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQG 204
           +GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+G
Sbjct: 10  SGAKFRISLGLPVGAVINCADNTGAKNLYIISVKG 44


>X52839-1|CAA37023.1|  140|Homo sapiens ribosomal protein L17
           protein.
          Length = 140

 Score =  182 bits (443), Expect = 1e-45
 Identities = 85/94 (90%), Positives = 90/94 (95%)
 Frame = +2

Query: 200 KXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 379
           K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNA
Sbjct: 43  KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 102

Query: 380 GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA 481
           GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA
Sbjct: 103 GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA 136



 Score = 70.5 bits (165), Expect = 7e-12
 Identities = 31/35 (88%), Positives = 35/35 (100%)
 Frame = +1

Query: 100 AGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQG 204
           +GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+G
Sbjct: 10  SGAKFRISLGLPVGAVINCADNTGAKNLYIISVKG 44


>BC106061-1|AAI06062.1|  140|Homo sapiens RPL23 protein protein.
          Length = 140

 Score =  182 bits (443), Expect = 1e-45
 Identities = 85/94 (90%), Positives = 90/94 (95%)
 Frame = +2

Query: 200 KXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 379
           K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNA
Sbjct: 43  KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 102

Query: 380 GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA 481
           GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA
Sbjct: 103 GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA 136



 Score = 70.5 bits (165), Expect = 7e-12
 Identities = 31/35 (88%), Positives = 35/35 (100%)
 Frame = +1

Query: 100 AGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQG 204
           +GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+G
Sbjct: 10  SGAKFRISLGLPVGAVINCADNTGAKNLYIISVKG 44


>BC104651-1|AAI04652.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  182 bits (443), Expect = 1e-45
 Identities = 85/94 (90%), Positives = 90/94 (95%)
 Frame = +2

Query: 200 KXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 379
           K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNA
Sbjct: 43  KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 102

Query: 380 GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA 481
           GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA
Sbjct: 103 GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA 136



 Score = 70.5 bits (165), Expect = 7e-12
 Identities = 31/35 (88%), Positives = 35/35 (100%)
 Frame = +1

Query: 100 AGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQG 204
           +GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+G
Sbjct: 10  SGAKFRISLGLPVGAVINCADNTGAKNLYIISVKG 44


>BC010114-1|AAH10114.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  182 bits (443), Expect = 1e-45
 Identities = 85/94 (90%), Positives = 90/94 (95%)
 Frame = +2

Query: 200 KXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 379
           K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNA
Sbjct: 43  KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 102

Query: 380 GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA 481
           GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA
Sbjct: 103 GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA 136



 Score = 70.5 bits (165), Expect = 7e-12
 Identities = 31/35 (88%), Positives = 35/35 (100%)
 Frame = +1

Query: 100 AGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQG 204
           +GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+G
Sbjct: 10  SGAKFRISLGLPVGAVINCADNTGAKNLYIISVKG 44


>BC003518-1|AAH03518.1|  134|Homo sapiens Similar to ribosomal
           protein L23 protein.
          Length = 134

 Score =  182 bits (443), Expect = 1e-45
 Identities = 85/94 (90%), Positives = 90/94 (95%)
 Frame = +2

Query: 200 KXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 379
           K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNA
Sbjct: 37  KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 96

Query: 380 GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA 481
           GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA
Sbjct: 97  GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA 130



 Score = 70.5 bits (165), Expect = 7e-12
 Identities = 31/35 (88%), Positives = 35/35 (100%)
 Frame = +1

Query: 100 AGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQG 204
           +GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+G
Sbjct: 4   SGAKFRISLGLPVGAVINCADNTGAKNLYIISVKG 38


>AB061827-1|BAB79465.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  182 bits (443), Expect = 1e-45
 Identities = 85/94 (90%), Positives = 90/94 (95%)
 Frame = +2

Query: 200 KXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 379
           K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNA
Sbjct: 43  KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 102

Query: 380 GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA 481
           GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA
Sbjct: 103 GVIVNNKGEMKGSAITGPVAKECADLWPRIASNA 136



 Score = 70.5 bits (165), Expect = 7e-12
 Identities = 31/35 (88%), Positives = 35/35 (100%)
 Frame = +1

Query: 100 AGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQG 204
           +GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+G
Sbjct: 10  SGAKFRISLGLPVGAVINCADNTGAKNLYIISVKG 44


>BC034378-1|AAH34378.1|   77|Homo sapiens RPL23 protein protein.
          Length = 77

 Score = 70.5 bits (165), Expect = 7e-12
 Identities = 31/35 (88%), Positives = 35/35 (100%)
 Frame = +1

Query: 100 AGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQG 204
           +GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+G
Sbjct: 10  SGAKFRISLGLPVGAVINCADNTGAKNLYIISVKG 44



 Score = 63.7 bits (148), Expect = 7e-10
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = +2

Query: 200 KXIKGRLNRLPAAGSGDMIVATVKKGKPELRKK 298
           K IKGRLNRLPAAG GDM++ATVKKGKPELRKK
Sbjct: 43  KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKK 75


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,682,308
Number of Sequences: 237096
Number of extensions: 1794585
Number of successful extensions: 4571
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4571
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)